New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3773205 = | 5 (0.300) | 3 (0.190) | 3/264 | 1.8 | 38.4% | coding (653/1494 nt) | PP_3331 | membrane protein |
? | NC_002947 | 3773238 = | 5 (0.320) | coding (686/1494 nt) | PP_3331 | membrane protein |
CTGGAACTGGGTCGGTGCATGGCTGCATTGGCTCTATCCGCTACGGGGCGGGTTCGGCTTCGACAACGGCTGGCGTACCCTGGTGATCGGCCTGTCCCTGGGCGCAACGGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACGGTGCTGGTGCTGTGGGTATT > NC_002947/3773101‑3773364 | cTGGAACTGGGTCGGTGCATGGCTGCATTGGCTCTATCCGCTACGGGGCGGGTTCGGCTTCGACAACGGCTGGCGTACCCTGGTGATCGGCCTGTCCCTGGGCGCAATGGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCt > 2:127950/1‑150 (MQ=255) cTGGGTCGGTGCATGGCTGCATTGGCTCTATCCGCTACGGGGCGGGTTCGGCTTCGACAACGGCTGGCGTACCCTGGTGATCGGCCTGTCCCTGGGCGCAACGGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCt > 2:254047/1‑150 (MQ=255) cTGGGTCGGTGCATGGCTGCATTGGCTCTATCCGCTACGGGGCGGGTTCGGCTTCGACAACGGCTGGCGTACCCTGGTGATCGGCCTGTCCCTGGGCGCAACGGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCt > 2:94919/1‑150 (MQ=255) ccGCTACGGGGCGGGTTCGGCTTCGACAACGGCTGGCGTACCCTGGTGATCGGCCTGTCCCTGGGCGCAACGGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGc < 2:306257/150‑1 (MQ=255) cGCTACGGGGCGGGTTCGGCTTCGACAACGGCTGGCGTACCCTGGTGATCGGCCTGTCCCTGGGCGCAACGGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGcc < 1:20172/150‑1 (MQ=255) caacggtcatgcccaggagcgccatgaccgttgGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACggtgctggtgc > 2:278754‑M2/34‑150 (MQ=255) aacggtcatgcccaggagcgccatgaccgttgGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCggct < 1:202025‑M2/66‑1 (MQ=255) aacggtcatgcccaggagcgccatgaccgttgGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCggct > 2:202025‑M2/33‑98 (MQ=255) GGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGcac < 1:36820‑M1/109‑1 (MQ=255) GGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGcac > 2:36820‑M1/1‑109 (MQ=255) GGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACGGTGCTGGTGCTGTGGGTAtt > 1:254047‑M1/1‑150 (MQ=255) GGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACGGTGCTGGTGCTGTGGGTAtt > 1:94919‑M1/1‑150 (MQ=255) | CTGGAACTGGGTCGGTGCATGGCTGCATTGGCTCTATCCGCTACGGGGCGGGTTCGGCTTCGACAACGGCTGGCGTACCCTGGTGATCGGCCTGTCCCTGGGCGCAACGGTCATGGCGCTCCTGGGCATGACCGTTGGCATACTGCGCCTGCGGCTGCGCAAGCGCTATCGCAGCGGCTCGTGCAGCCCCTACCCTGGCGGCTGGCTGCGCTGGCACCACATCGGCGGGCTACTGTTCGGCACGGTGCTGGTGCTGTGGGTATT > NC_002947/3773101‑3773364 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |