New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4649525 = | 12 (0.720) | 6 (0.490) | 5/208 | 0.9 | 50.6% | intergenic (+10/+121) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
? | NC_002947 | 4649633 = | 3 (0.250) | intergenic (+118/+13) | fusB/PP_4112 | elongation factor G 2/sulfate transporter |
AACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAA > NC_002947/4649548‑4649780 | aacccgctcctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACaaa > 1:366597‑M2/86‑150 (MQ=255) ccgctcctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGtttt < 2:325746‑M2/14‑1 (MQ=255) ccgctcctacaggggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGtttt > 1:325746‑M2/83‑96 (MQ=255) CTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCAcg < 2:297511‑M1/150‑1 (MQ=255) gggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCaaa > 2:147932‑M2/71‑150 (MQ=255) gggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCaaa > 2:147942‑M2/71‑150 (MQ=255) ggggcgcacaatgtttgggcctgcggccatcctgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAAt < 2:366597‑M2/81‑1 (MQ=255) aaCATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTgg > 2:175167/1‑150 (MQ=255) ttGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATa > 1:343919/1‑150 (MQ=255) ttGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATa > 1:75270/1‑150 (MQ=255) tgtaggagcgggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAgg < 1:175167‑M2/113‑1 (MQ=255) gcgggattccccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCa < 2:288311‑M2/120‑1 (MQ=255) ggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCTCGCAGGGTTTTCAgcg > 2:157998‑M2/28‑150 (MQ=255) ggtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCTCGCAGGGTTTTCAgcg > 2:351032‑M2/28‑150 (MQ=255) gtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAgcgc > 1:262120‑M2/27‑150 (MQ=255) gtttacccgcgaagaggccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGCCATAGCGCTCGCGCAGGGTTTTCAgcgc > 2:68835‑M2/27‑150 (MQ=255) gccggcacagACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGaataa > 1:105468‑M2/11‑150 (MQ=255) agACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACaaa > 1:89245‑M2/3‑150 (MQ=255) | AACCCGCTCCTACAGGATGGCCGCAGGCCCAAACATTGTGCGCCCCCCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGACCGCAACAGTTTTCAATGCTGCTCGCCCGCCCGCTTCAACAGCTTCTTGCACCGCTCCGACAAATGCACCACGCGCAAATGCTTGCCCGCCTTGGCATAGCGCTCGCGCAGGGTTTTCAGCGCCGCAACGGCCGAATAATCGACAAA > NC_002947/4649548‑4649780 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |