New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 6029891 | 9 (0.540) | 4 (0.280) | 4/244 | 1.3 | 33.8% | intergenic (‑57/+54) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
? | NC_002947 | = 6029906 | 8 (0.560) | intergenic (‑72/+39) | PP_5277/kauB | MFS transporter/4‑guanidinobutyraldehyde dehydrogenase |
TCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCAT > NC_002947/6029768‑6030052 | tcaaacagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCgg > 2:286687‑M1/104‑150 (MQ=255) acagtcgggcaacggccgtgacaagtcgctgcacgcactggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggttggtcctttttGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCtt > 2:157585‑M1/100‑150 (MQ=255) cgcCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCtgcaggagcgggcttgcccgc > 1:106028‑M2/1‑129 (MQ=255) cAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCGGCAACGGTCGCGAAGACCTGCAGGAGCGGGCGTGCCCGCGAAAAGGACCTACCGGGGTACAGCGTg > 1:231087/1‑150 (MQ=255) actggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGc < 2:47803‑M1/45‑1 (MQ=255) actggagaagtacaccgagctgaaggcgacctggatcaagctgtaacccggtaggtccttttcGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGc > 1:47803‑M1/64‑108 (MQ=255) cccAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTCCAGCTTGATCCAGGTCGCCTTCAGCTc > 2:219202/1‑150 (MQ=255) cccAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTc > 2:113176/1‑150 (MQ=255) cAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCgg > 2:318857/1‑150 (MQ=255) cccAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAgtgc < 1:318857/150‑1 (MQ=255) cAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAg > 1:316462/1‑150 (MQ=255) gCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGc > 2:73778/1‑150 (MQ=255) ccGCTCCTGCAACGGTCGCGAAGACCtgcaggagcgggcttgcccgcaaatgggcccctggaaatattggctgggaggctgtaatgcgttggggtacctacttcgccgtactggcatcggtgctcagtgtcgggctggcgcttggcgtga < 1:155344‑M2/150‑125 (MQ=255) cTGCAACGGTCGCGAAGACCtgcaggagcgggcttgcccgcaaatgggcccctggaaatattggctgggaggctgtaatgcgttggggtacctacttc > 2:26002‑M2/1‑20 (MQ=255) cTGCAACGGTCGCGAAGACCtgcaggagcgggcttgcccgcaaatgggcccctggaaatattggctgggaggctgtaatgcgttggggtacctacttc < 1:26002‑M2/98‑79 (MQ=255) aaCGGTCGCGAAGACCgttgcaggagcgggcttgcccgcaaatgggcccctggaaatattggctgggaggctgtaatgcgttggggtacctacttcgccgtactggcatcggtgctcagtgtcgggctggcgcttggcgtgagcatgccg < 1:379238‑M2/150‑135 (MQ=255) caCCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCAt < 1:6439/149‑1 (MQ=255) | TCACGCCAAGCGCCAGCCCGACACTGAGCACCGATGCCAGTACGGCGAAGTAGGTACCCCAACGCATTACAGCCTCCCAGCCAATATTTCCAGGGGCCCATTTGCGGGCAAGCCCGCTCCTGCAACGGTCGCGAAGACCTGCAGGAGCGGGCTTGCCCGCGAAAAGGACCTACCGGGTTACAGCTTGATCCAGGTCGCCTTCAGCTCGGTGTACTTCTCCAGTGCGTGCAGCGACTTGTCACGGCCGTTGCCCGACTGTTTGAAGCCACCGAACGGCGCGGTCAT > NC_002947/6029768‑6030052 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |