| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_002947 | 3,823,860 | Δ9 bp | coding (1281‑1289/1293 nt) | kguT ← | 2‑ketogluconate transporter, putative |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_002947 | 3823860 | 3823868 | 9 | 19 [0] | [0] 18 | kguT | 2‑ketogluconate transporter, putative |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 3823859 | 0 (0.000) | 18 (0.820) | 14/264 | 0.3 | 100% | coding (1290/1293 nt) | kguT | 2‑ketogluconate transporter, putative |
| ? | NC_002947 | 3823869 = | 0 (0.000) | coding (1280/1293 nt) | kguT | 2‑ketogluconate transporter, putative | |||||
GCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAATGGTTCATGGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTAGCCCCATTG > NC_002947/3823742‑3824003 | cgggccagggcatcgggctgggtggtgtccacccaggtcacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggtttcctaaGCCAGAcgc > 1:513505‑M2/128‑136 (MQ=255) gctgggtggtgtccacccaggtcacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTg > 1:286273‑M2/112‑136 (MQ=255) gctgggtggtgtccacccaggtcacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTg > 1:93312‑M2/112‑136 (MQ=255) gtggtgtccacccaggtcacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCgg < 2:27717‑M2/30‑1 (MQ=255) acccaggtcacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTc > 1:55018‑M2/98‑136 (MQ=255) cccaggtcacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCt < 2:329721‑M2/40‑1 (MQ=255) aggtcacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtatatacaggacgatacgcttcttcattgcaggtttcctaaGCCAGACGAGACCTATCGCCCTTAGCCCGGCCAGAGGTCTggg > 2:90274‑M2/94‑136 (MQ=255) cacctcgacgcgatcttgcaggcgtgccatcaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGt < 1:291352‑M2/47‑1 (MQ=255) gcaggcgtgccaccaagtcgtcggacaggcgtttatacaggacgattcgcttcttcattgcaggttgcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTaa < 1:184699‑M2/64‑1 (MQ=255) tttttacaggacgattcggttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGTGGTCTGGTAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACAt < 2:363235‑M2/95‑1 (MQ=255) gattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGcacc < 2:227903‑M2/89‑1 (MQ=255) gattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGcacc > 1:227903‑M2/30‑118 (MQ=255) gattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAAcaggtctgt > 1:235005‑M2/30‑132 (MQ=255) gattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAaga > 1:498699‑M2/30‑136 (MQ=255) gattcgcttcttcattgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAaga > 1:361681‑M2/30‑136 (MQ=255) ttgcaggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGgcccgc < 2:513505‑M2/121‑1 (MQ=255) aggtttcctaaGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGt > 2:415521‑M2/12‑136 (MQ=255) aGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTAGCCCCATTg > 2:507614‑M2/2‑136 (MQ=255) | GCATCGGGCTGGGTGGTGTCCACCCAGGTCACCTCGACGCGATCTTGCAGGCGTGCCATCAAGTCGTCGGACAGGCGTTTATACAGGACGATTCGCTTCTTCATTGCAGGTTTCCTAATGGTTCATGGCCAGACGCGAGCTATCGCGCTTTGCCCGGCCAGAGGTCTGGGAAGTATTGAGCGCAGCGGTAAGCGCCACTGCAGTCAGCAGCGCACCACACATGAACAGGTAAGAGGCGCCGGGCCCGCCCGTAGCCCCATTG > NC_002947/3823742‑3824003 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |