Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_002947	3351244	3351352	109	2 [1]	[1] 2	PP_2944	sensor histidine kinase

TGGTGATGGGCGACCGGCATCGGCTGTTGCTGATTCTGATCAACCTGATCAGCAACGCCAAGTACGCCATGTCCGGCCCCGGCAGCGACCCGCGGACGATGATCCTCAGGACGCGCATCGTTGAGGGGGGCTTGCTGGAAATGAGCGTGCTGGACGAGGGCGAAGGCATTGCCCCTGAAAACCTGCAGAAGATCTTTGCCCATGGCTTCACCAC  >  NC_002947/3351108‑3351321                                                                                                                                        |                                                                               tGGTGATGGGCGACCGGCATCGGCTGTTGCTGATTCTGATCAACCTGATCAGCAACGCCAAGTACGCCATGTCCGGCCCCGGCAGCGACCCGCGGACGATGATCCTCAGGACGCGCATCGTTGAGGGGGGCTTGCt                                                                                <  1:501975/136‑1 (MQ=255)                                                                               ccGGCAGCGACCCGCGGACGATGATCCTCAGGACGCGCATCGTTGAGGGGGGCTTGCTGGAAATGAGCGTGCTGGACGAGGGCGAAGGCATTGCCCCTGAAAACCTGCAGAAGATCTTTGCCCATGGCTTcaccac  >  1:29311/1‑136 (MQ=255)                                                                                                                                        |                                                                               TGGTGATGGGCGACCGGCATCGGCTGTTGCTGATTCTGATCAACCTGATCAGCAACGCCAAGTACGCCATGTCCGGCCCCGGCAGCGACCCGCGGACGATGATCCTCAGGACGCGCATCGTTGAGGGGGGCTTGCTGGAAATGAGCGTGCTGGACGAGGGCGAAGGCATTGCCCCTGAAAACCTGCAGAAGATCTTTGCCCATGGCTTCACCAC  >  NC_002947/3351108‑3351321

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑