| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 191,912 | Δ1 bp | 5.3% | coding (1606/2157 nt) | paxB ← | toxin secretion ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 191,912 | 0 | C | . | 5.3% | 1098.8 / 52.7 | 323 | coding (1606/2157 nt) | paxB | toxin secretion ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base C (171/135); new base . (11/6); total (182/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 326 total aligned reads displayed.
GTAGCGGGCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGG > NC_002947/191763‑192060 | gCGGGCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTa < 2:8792664/150‑1 (MQ=255) gCGGGCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTa > 2:842833/1‑150 (MQ=255) ggCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑Ag < 1:7189545/150‑1 (MQ=255) gcTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCT‑GTACGAGGCcgat < 2:3361546/150‑2 (MQ=255) cTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCcgacg > 1:3992489/1‑150 (MQ=255) tGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCcgacga > 2:7706803/1‑150 (MQ=255) cAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCGTCGGCCT‑GTACGAGGCcgatggtggc < 2:2870970/150‑8 (MQ=255) cAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAg > 1:7912856/1‑150 (MQ=255) cAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAg > 2:7028158/1‑150 (MQ=255) aGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGc < 2:1363498/150‑1 (MQ=255) gTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCtt < 1:512953/150‑1 (MQ=255) gTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCtt < 1:103084/150‑1 (MQ=255) ttGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTg < 1:3925159/150‑1 (MQ=255) aCGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAg > 1:482735/1‑150 (MQ=255) gCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCg > 2:4730711/1‑150 (MQ=255) gCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCg > 1:7260146/1‑150 (MQ=255) gCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCg > 2:125256/1‑150 (MQ=255) aaGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAg > 2:3721792/1‑150 (MQ=255) aGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGc < 2:761776/150‑1 (MQ=255) ggTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGct > 2:7177453/1‑150 (MQ=255) gCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCtt > 2:559310/1‑150 (MQ=255) ccGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTg > 2:1845191/1‑150 (MQ=255) cagcagCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGa < 1:1490979/150‑1 (MQ=255) cagcagCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGa < 2:6932405/150‑1 (MQ=255) cagcagCTGGATATACTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCCCTGACATCGATCTGGCGAATGTCGACGAAATCAACCAGCAGCGAGCCACAATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGa > 2:3103265/1‑150 (MQ=255) agcagcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAg < 1:7152109/150‑1 (MQ=255) agcagcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAg < 1:4396148/150‑1 (MQ=255) agcagcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAg < 1:2765531/150‑1 (MQ=255) agcagcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAg < 1:1118437/150‑1 (MQ=255) agcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCg < 2:7952556/150‑1 (MQ=255) gcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGc < 2:917379/150‑1 (MQ=255) ggATATCCTGGGGGACGGAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGc < 2:5207339/150‑1 (MQ=255) gATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCg > 2:7448978/1‑150 (MQ=255) gATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCg < 2:6147592/150‑1 (MQ=255) tCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCg > 1:5737627/1‑150 (MQ=255) ccTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCga > 2:1532805/1‑150 (MQ=255) tGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCgatg > 1:1343906/1‑150 (MQ=255) gggggACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCgatga < 2:6660169/150‑1 (MQ=255) ggggACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCgatgat < 2:2710794/150‑1 (MQ=255) ggACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGc > 1:1530383/1‑150 (MQ=255) gTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGAc < 2:3757831/150‑1 (MQ=255) gTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGAc > 2:2052350/1‑150 (MQ=255) gCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCtt > 1:3646097/1‑150 (MQ=255) cGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGACGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTtct > 1:4092933/1‑150 (MQ=255) gATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTtctc > 1:8213959/1‑150 (MQ=255) tcagccgcAGATCGCAGACATCGAACTGGCGAATGTCGACGCCAACAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCACGCCAg > 1:8366899/6‑150 (MQ=255) gcAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGa > 2:1975914/1‑150 (MQ=255) gcAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGa > 2:5135823/1‑150 (MQ=255) cAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGAt < 2:3898396/150‑1 (MQ=255) cAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGAt < 1:8832754/150‑1 (MQ=255) aGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATg < 2:7887469/150‑1 (MQ=255) aGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATg < 2:586046/150‑1 (MQ=255) aGTTCGCGGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATg < 1:6404998/150‑1 (MQ=255) gTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATgg < 1:7083792/150‑1 (MQ=255) tGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGt < 2:439872/150‑1 (MQ=255) tGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGt > 1:3390243/1‑150 (MQ=255) aCATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTg < 1:6671640/150‑1 (MQ=255) cATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGa < 2:9044808/150‑1 (MQ=255) aTCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGat < 1:1765179/150‑1 (MQ=255) gATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAtt > 1:5883852/1‑150 (MQ=255) aTCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAttc < 1:3328316/150‑1 (MQ=255) aTCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAttc < 1:5483634/150‑1 (MQ=255) ggCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCa < 2:4112708/150‑1 (MQ=255) ggCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCa < 1:4649677/150‑1 (MQ=255) ggCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCa < 2:5421506/150‑1 (MQ=255) gCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAg < 2:1076063/150‑1 (MQ=255) cGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAgg < 1:2231139/150‑1 (MQ=255) cGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAgg < 1:6688092/150‑1 (MQ=255) aaTGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGc < 1:6226896/150‑1 (MQ=255) tCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAgg > 1:7394271/1‑150 (MQ=255) cGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGt > 2:4991212/1‑150 (MQ=255) aCGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTc < 1:2716079/150‑1 (MQ=255) gCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctg > 1:6601210/1‑150 (MQ=255) ccATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctgc < 1:184810/150‑1 (MQ=255) cATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctgct > 2:1172574/1‑150 (MQ=255) cATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctgct > 2:657390/1‑150 (MQ=255) aTCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctgctg < 1:2305815/150‑1 (MQ=255) tCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTgg > 1:6009740/1‑150 (MQ=255) aCCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTc < 1:7706803/150‑1 (MQ=255) aCCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTc < 1:559003/150‑1 (MQ=255) cagcagCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCGTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTGCTCGCCAGGGCGGAT‑GTCAGGGTGAGCTTCTTCAGGGCCAGGTTCTGCGGGGGCGGa > 2:7659569/1‑150 (MQ=255) cagcGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATa > 1:9163061/1‑150 (MQ=255) agcGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATaa > 1:8607475/1‑150 (MQ=255) cGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGt < 2:5559147/150‑1 (MQ=255) gAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTg > 2:1675260/1‑150 (MQ=255) tcatcgtCGGCCT‑GTACGAGGCCGATGAAGAGCTTGGCCAGAGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCTCCAGGGCGGATGGTCAGGATGATATTCTTCAGGGCCAGGTTCTGCAGGTACGGATAAGTGAAg > 1:2439645/7‑150 (MQ=255) ccaccaTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAg > 2:3172274/1‑150 (MQ=255) ccaccaTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAg < 1:7542069/150‑1 (MQ=255) ccaccaTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAg < 1:7760467/150‑1 (MQ=255) accaTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTc > 2:2464476/1‑150 (MQ=255) tcgtCGGCCT‑GTACGAGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCg > 1:8117849/4‑150 (MQ=255) tcgtCGGCCT‑GTACGAGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCg > 1:5319378/4‑150 (MQ=255) cgtCGGCCT‑GTACGAGGCCGATGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGa > 2:4267295/3‑150 (MQ=39) caTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGa > 1:2513561/1‑150 (MQ=255) tCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGAcc > 2:457438/1‑150 (MQ=255) cGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGAccc < 2:7295513/150‑1 (MQ=255) gCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCcg > 2:8067713/1‑150 (MQ=255) tCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCgg > 1:1901453/1‑150 (MQ=255) tCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCgg > 2:3482356/1‑150 (MQ=255) tCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCgg > 1:8543372/1‑150 (MQ=255) | GTAGCGGGCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGG > NC_002947/191763‑192060 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |