BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	3,336,923	Δ1 bp	5.6%	coding (604/1704 nt)	PP_2932 ←	amidase family protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	3,336,923	0	A	.	5.6%	1131.5 / 57.6	337	coding (604/1704 nt)	PP_2932	amidase family protein
Reads supporting (aligned to +/- strand): ref base A (162/155); new base . (12/7); total (174/163)
Fisher's exact test for biased strand distribution p-value = 3.51e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.73e-01

Only 100 of 338 total aligned reads displayed.

GCGCCACAGGTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTCAGGTAG  >  NC_002947/3336774‑3337071

  gcCACAGGTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACg                                                                                                                                                    <  1:1967796/150‑1 (MQ=255)

   ccACAGGTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACgg                                                                                                                                                   <  2:2099812/150‑1 (MQ=255)

    cacaGGTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACggg                                                                                                                                                  <  2:380810/150‑1 (MQ=255)

    cacaGGTCGCCGCGCTGGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTCGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACggg                                                                                                                                                  >  1:3903655/1‑150 (MQ=255)

      caGGTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGgt                                                                                                                                                <  1:5663908/150‑1 (MQ=255)

       aGGTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGgtg                                                                                                                                               <  1:4156799/150‑1 (MQ=255)

         gTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTa                                                                                                                                             <  2:5216681/150‑1 (MQ=255)

                  cTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAg                                                                                                                                    <  1:7455062/150‑1 (MQ=255)

                     gTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGcc                                                                                                                                 <  1:4750590/150‑1 (MQ=255)

                      tCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCACACAGGCCg                                                                                                                                >  1:2836050/1‑150 (MQ=255)

                       cGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCgt                                                                                                                               <  2:3296248/150‑1 (MQ=255)

                       cGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCgt                                                                                                                               >  1:3100673/1‑150 (MQ=255)

                          cGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCgttgt                                                                                                                            <  2:5502504/150‑1 (MQ=255)

                           gTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCgttgtt                                                                                                                           <  2:5418015/150‑1 (MQ=255)

                           gTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCgttgtt                                                                                                                           <  1:7009560/150‑1 (MQ=255)

                              aTCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGa                                                                                                                        >  2:929024/1‑150 (MQ=255)

                               tCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGAc                                                                                                                       >  2:4048808/1‑150 (MQ=255)

                               tCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGAc                                                                                                                       >  1:4779094/1‑150 (MQ=255)

                                cGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCAAGGTCGGCGTTAGCGGCCCGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACg                                                                                                                      >  2:5298258/1‑150 (MQ=255)

                                   cTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCg                                                                                                                   <  1:1100137/150‑1 (MQ=255)

                                      ccaccaCGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGc                                                                                                                <  1:1020536/150‑1 (MQ=255)

                                                gAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTa                                                                                                                                             <  2:3062961/111‑1 (MQ=255)

                                                 aGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTg                                                                                                     >  2:1077436/1‑150 (MQ=255)

                                                 aGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTg                                                                                                     >  2:4370475/1‑150 (MQ=255)

                                                     tttCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGAcc                                                                                                 >  2:2884187/1‑150 (MQ=255)

                                                       tCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAg                                                                                               >  1:1695870/1‑150 (MQ=255)

                                                       tCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAg                                                                                               <  1:8532912/150‑1 (MQ=255)

                                                       tCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAg                                                                                               <  1:8971966/150‑1 (MQ=255)

                                                         caggaggTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTCGCGGCCAGTTGCCACGCACCGAACTCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGt                                                                                             <  2:8354138/149‑1 (MQ=255)

                                                         aaGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACCGGCCGGTGTTGGACGCCGGGCCACGGCCGCGGGACCgggg                                                                                             >  1:5588104/1‑149 (MQ=255)

                                                         aaGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGt                                                                                             >  2:5905690/1‑150 (MQ=255)

                                                           ggaggTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGttt                                                                                           >  2:5311343/1‑150 (MQ=255)

                                                              ggTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTttctt                                                                                        <  1:8725223/150‑1 (MQ=255)

                                                               gTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTttcttc                                                                                       <  2:333753/150‑1 (MQ=255)

                                                                  ggCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCggc                                                                                    >  1:2402348/1‑150 (MQ=255)

                                                                    ccATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCggcca                                                                                  >  1:7751702/1‑150 (MQ=255)

                                                                    ccATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCggcca                                                                                  >  2:1176885/1‑150 (MQ=255)

                                                                    ccATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCggcca                                                                                  >  1:6423904/1‑150 (MQ=255)

                                                                      aTGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCggccagg                                                                                >  2:6396998/1‑150 (MQ=255)

                                                                         gTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCggccaggcca                                                                             <  1:9142048/150‑1 (MQ=255)

                                                                           gCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCaat                                                                           >  2:2352585/1‑149 (MQ=255)

                                                                           gCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCaaa                                                                           <  2:139670/150‑1 (MQ=255)

                                                                               gCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGgca                                                                       >  2:201502/1‑149 (MQ=255)

                                                                                 aTAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCt                                                                     <  1:5913879/150‑1 (MQ=255)

                                                                                   aGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGa                                                                   <  1:3381848/150‑1 (MQ=255)

                                                                                    gggCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGaa                                                                  >  1:2197815/1‑150 (MQ=255)

                                                                                     ggCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAg                                                                 >  2:7397596/1‑150 (MQ=255)

                                                                                     ggCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAg                                                                 >  2:6679891/1‑150 (MQ=255)

                                                                                     ggCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTGGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAg                                                                 >  2:7225768/1‑150 (MQ=255)

                                                                                        accaccacGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTg                                                              >  1:95951/1‑150 (MQ=255)

                                                                                          caccacGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTggc                                                            >  1:3520900/1‑150 (MQ=255)

                                                                                          caccacGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTggc                                                            >  1:5262815/1‑150 (MQ=255)

                                                                                          caccacGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTggc                                                            >  1:2295047/1‑150 (MQ=255)

                                                                                               cGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGcggcgg                                                       <  2:2756347/150‑1 (MQ=255)

                                                                                                   cATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCggcggtggc                                                   >  1:808804/1‑150 (MQ=255)

                                                                                                   cATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCggcggtggc                                                   >  1:6608736/1‑150 (MQ=255)

                                                                                                     tGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCggcggtggcgg                                                 <  2:2453052/150‑1 (MQ=255)

                                                                                                        tCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCggcggtg                                                     <  1:7235310/143‑1 (MQ=255)

                                                                                                        tCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTAc                                              <  2:110513/150‑1 (MQ=255)

                                                                                                        tCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTAc                                              >  2:782136/1‑150 (MQ=255)

                                                                                                        tCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTAc                                              <  2:1857452/150‑1 (MQ=255)

                                                                                                           gCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCgg                                           <  2:9088017/150‑1 (MQ=255)

                                                                                                            cGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGc                                          <  1:7097359/150‑1 (MQ=255)

                                                                                                               tAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCAcc                                       <  2:7151823/150‑1 (MQ=255)

                                                                                                                   ggCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTg                                   <  1:7946196/150‑1 (MQ=255)

                                                                                                                   ggCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTg                                   >  2:7281159/1‑150 (MQ=255)

                                                                                                                    gCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTgg                                  >  1:7348869/1‑150 (MQ=255)

                                                                                                                      cAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGAc                                <  1:1627658/150‑1 (MQ=255)

                                                                                                                       aGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGgcgc                                                                      <  1:1908957/111‑1 (MQ=255)

                                                                                                                            ccACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGGAGCTGGCGGCGGTGGCGGTCCCGGCACCGGTGGACGAGccc                          >  2:422407/1‑150 (MQ=255)

                                                                                                                             cACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCg                         >  2:5622609/1‑150 (MQ=255)

                                                                                                                              aCGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGa                        >  2:6665882/1‑150 (MQ=255)

                                                                                                                              aCGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGa                        >  1:8061485/1‑150 (MQ=255)

                                                                                                                              aCGCACCGAAATCACCCCG‑AGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGGGGCGGTACCGGCACCGTTGGACGAGCCCGa                        >  1:2745493/1‑150 (MQ=255)

                                                                                                                               cGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAg                       >  1:8409590/1‑150 (MQ=255)

                                                                                                                                  aCCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCg                    >  1:6663439/1‑150 (MQ=255)

                                                                                                                                    cGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGaa                  >  1:8702050/1‑150 (MQ=255)

                                                                                                                                     gAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAg                 >  1:3670309/1‑150 (MQ=255)

                                                                                                                                     gAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAg                 >  1:4498576/1‑150 (MQ=255)

                                                                                                                                       ctacACCCCGTCGCG‑CGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTAGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAggg               >  1:2635912/4‑150 (MQ=255)

                                                                                                                                       aaTCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAggg               <  2:1291939/150‑1 (MQ=255)

                                                                                                                                        tacACCCCGTCGCG‑CGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGgc              >  1:517745/3‑150 (MQ=255)

                                                                                                                                        tacACCCCGTCGCG‑CGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGGGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGgc              >  1:1775131/3‑150 (MQ=255)

                                                                                                                                        tacACCCCGTCGCG‑CGGGGTGTAGGCGCACAGGCCGTGGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCACAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGgc              >  2:5052535/3‑150 (MQ=255)

                                                                                                                                          cACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGgcgc            <  2:8172257/150‑1 (MQ=255)

                                                                                                                                           aCCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGcgcg           <  1:5038410/150‑1 (MQ=255)

                                                                                                                                           aCCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGcgcg           <  2:880982/150‑1 (MQ=255)

                                                                                                                                           aCCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGcgcg           <  1:7632947/150‑1 (MQ=255)

                                                                                                                                            ccccG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCgg          >  1:2678131/1‑150 (MQ=255)

                                                                                                                                            ccccG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCgg          <  1:1333424/150‑1 (MQ=255)

                                                                                                                                             cccG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGt         >  1:81871/1‑150 (MQ=255)

                                                                                                                                             cccG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGt         >  2:4833777/1‑150 (MQ=255)

                                                                                                                                              ccG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTc        >  1:8148695/1‑150 (MQ=255)

                                                                                                                                              ccG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTc        >  1:324100/1‑150 (MQ=255)

                                                                                                                                              ccG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTc        >  1:4421189/1‑150 (MQ=255)

                                                                                                                                               cg‑cgcgACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTCa       <  2:4614923/150‑1 (MQ=255)

                                                                                                                                                g‑cgcgACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTCAg      <  2:7580287/150‑1 (MQ=255)

                                                                                                                                                g‑cgcgACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTCAg      >  2:1028352/1‑150 (MQ=255)

                                                                                                                                                  cgcgACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTCAgg     <  1:8467636/150‑1 (MQ=255)

                                                                                                                                                     gACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTCAGGTAg  >  2:4426246/1‑150 (MQ=255)

GCGCCACAGGTCGCCGCGCTTGTCGGCGTCATCGGCTACCACCACGTCGAGGATTTCAAGGAGGTCGGCCATGGTGCGGGCATAGGGCACCACCACGTCCATGGTCGGCGTTAGCGGCCAGTTGCCACGCACCGAAATCACCCCG‑CGCGACGGGGTGTAGGCGCACAGGCCGTTGTTGGACGCCGGGCCACGGCCGCTGGACCAGGTTTCTTCGGCCAGGCCAAAGGCGCTGAAGCTGGCGGCGGTGGCGGTACCGGCACCGTTGGACGAGCCCGAGGCGAAGGGCGCGGTCAGGTAG  >  NC_002947/3336774‑3337071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`