| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 191,916:1 | +G | 5.2% | coding (1602/2157 nt) | paxB ← | toxin secretion ATP‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 191,916 | 1 | . | G | 5.2% | 1462.6 / 67.0 | 325 | coding (1602/2157 nt) | paxB | toxin secretion ATP‑binding protein |
| Reads supporting (aligned to +/- strand): ref base . (173/135); new base G (11/6); total (184/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.18e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.67e-01 | |||||||||||
Only 100 of 326 total aligned reads displayed.
GGCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGGAACTC > NC_002947/191769‑192065 | ggCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑Ag < 1:7189545/150‑1 (MQ=255) gcgcCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑Agg > 1:8026952/1‑150 (MQ=255) gcgcCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑Agg < 2:3431695/150‑1 (MQ=255) cgccgcTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGc > 2:1885587/1‑150 (MQ=255) cgcTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCcga > 1:8602940/1‑150 (MQ=255) gcTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGTCACCATCGGCCTCGTAC‑AGGCcgac > 1:3862030/1‑150 (MQ=255) gcTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCT‑GTACGAGGCcgat < 1:6026347/150‑2 (MQ=255) ccAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGa > 2:8227942/1‑150 (MQ=255) gTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCtt < 1:103084/150‑1 (MQ=255) aCGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAg > 2:4103103/1‑150 (MQ=255) cGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGc > 2:1987158/1‑150 (MQ=255) gCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCg > 1:7260146/1‑150 (MQ=255) ggTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGct > 2:7177620/1‑150 (MQ=255) tGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGctct > 1:877403/1‑150 (MQ=255) gCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTGGCCg > 2:7032713/1‑150 (MQ=255) cagcagCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGa > 2:134968/1‑150 (MQ=255) cagcagCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGa < 1:1490979/150‑1 (MQ=255) agcagcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAg < 1:2765531/150‑1 (MQ=255) agcagcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAg < 1:1118437/150‑1 (MQ=255) agcagcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAg < 1:7152109/150‑1 (MQ=255) gcTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGc < 2:917379/150‑1 (MQ=255) cTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCt > 2:1069156/1‑150 (MQ=255) gATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCg > 2:6629012/1‑150 (MQ=255) gATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCg > 2:6940158/1‑150 (MQ=255) atatCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCgg < 1:5074991/150‑1 (MQ=255) tatCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGc > 2:7371208/1‑150 (MQ=255) tCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCg > 1:5737627/1‑150 (MQ=255) tCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCg > 2:7453457/1‑150 (MQ=255) ccTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCga < 2:7622739/150‑1 (MQ=255) tGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCgatg > 1:1343906/1‑150 (MQ=255) tGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCgatg > 1:5944459/1‑150 (MQ=255) ggACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGc > 1:1530383/1‑150 (MQ=255) aGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCt > 2:3827948/1‑150 (MQ=255) cGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTtct > 1:4092870/1‑150 (MQ=255) gATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTtctc > 2:4167955/1‑150 (MQ=255) gATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTtctc < 2:6246105/150‑1 (MQ=255) tgtgGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCCCCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAg > 1:8366817/1‑150 (MQ=255) tgGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAggg > 1:4394047/1‑150 (MQ=255) gcgcAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCg > 2:50303/1‑150 (MQ=255) gcAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGa > 2:8671213/1‑150 (MQ=255) cAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGAt < 2:6868510/150‑1 (MQ=255) aGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATg < 2:7887468/150‑1 (MQ=255) gTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATgg < 1:7083792/150‑1 (MQ=255) gCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAg > 1:7708536/1‑150 (MQ=255) gCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAg < 2:7915157/150‑1 (MQ=255) gCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAg < 2:5659300/150‑1 (MQ=255) cATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGa < 2:4442456/150‑1 (MQ=255) cATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGa < 2:9044808/150‑1 (MQ=255) aTCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGat < 1:1765179/150‑1 (MQ=255) aTCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGat < 2:3753220/150‑1 (MQ=255) gATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAtt > 1:5201417/1‑150 (MQ=255) aTCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAttc < 2:542435/150‑1 (MQ=255) aTCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAttc < 1:5483634/150‑1 (MQ=255) aTCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAttc < 1:3327832/150‑1 (MQ=255) tGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAttcttc > 2:2756784/1‑150 (MQ=255) tGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATAttcttc < 2:3229764/150‑1 (MQ=255) ggCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCa < 1:9072142/150‑1 (MQ=255) ggCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCa < 1:6463862/150‑1 (MQ=255) gCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAg > 1:3588268/1‑150 (MQ=255) cGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAgg < 1:2231139/150‑1 (MQ=255) aaTGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGc < 1:6227186/150‑1 (MQ=255) tCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAgg > 1:7394271/1‑150 (MQ=255) cGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGt > 1:3966493/1‑150 (MQ=255) aCGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTc < 2:117400/150‑1 (MQ=255) aCGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTc > 2:528354/1‑150 (MQ=255) aCGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTc < 2:117242/150‑1 (MQ=255) aCGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTc < 1:2716079/150‑1 (MQ=255) gCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctg > 1:6601222/1‑150 (MQ=255) gCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctg < 2:8026952/150‑1 (MQ=255) ccATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctgc < 1:184810/150‑1 (MQ=255) cATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGAc > 2:2284842/1‑97 (MQ=255) cATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctgct < 1:8121410/150‑1 (MQ=255) aTCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTctgctg < 1:2305815/150‑1 (MQ=255) tCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGcc > 1:7676393/1‑68 (MQ=255) tCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGcc < 2:7676393/68‑1 (MQ=255) aCCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTc < 1:559003/150‑1 (MQ=255) ccAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCg > 2:1536980/1‑150 (MQ=255) ccAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCg < 2:5960020/150‑1 (MQ=255) cagcagCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCgg > 2:1427416/1‑150 (MQ=255) cagcagCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCgg > 2:3129855/1‑150 (MQ=255) agcagcGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGa > 1:3374430/1‑150 (MQ=255) gcGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAg > 2:2990036/1‑150 (MQ=255) cGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGt < 2:5559222/150‑1 (MQ=255) gAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTg > 2:438021/1‑150 (MQ=255) gCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGaa < 1:7880853/150‑1 (MQ=255) gCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGaa < 2:4654284/150‑1 (MQ=255) gCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGaa < 1:8227942/150‑1 (MQ=255) tcatcgtCGGCCT‑GTACGAGGCCGATGAAGAGCTTGGCCAGAGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCTCCAGGGCGGATGGTCAGGATGATATTCTTCAGGGCCAGGTTCTGCAGGTACGGATAAGTGAAg > 1:2439645/7‑150 (MQ=255) caccaTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGt > 1:4537561/1‑150 (MQ=255) accaTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTc < 2:1752972/150‑1 (MQ=255) accaTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTc > 2:2554935/1‑150 (MQ=255) cgtCGGCCT‑GTACGAGGCCGATGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGa > 2:4788980/3‑150 (MQ=39) caTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGa > 1:2513561/1‑150 (MQ=255) caTCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGa < 2:3519153/150‑1 (MQ=255) gtCGGCCT‑GTACGAGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGAc > 1:6831114/2‑150 (MQ=255) ggCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGAcccc > 2:5159152/1‑150 (MQ=255) tCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCgg > 1:8543362/1‑150 (MQ=255) tCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCgg > 1:1901453/1‑150 (MQ=255) tCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCgg > 1:6676294/1‑150 (MQ=255) gTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGGaa > 1:471402/1‑150 (MQ=255) | GGCGCCGCTGACCAGGTTGTCACGCAAGGTGCCGGCCAGCAGCTGGATATCCTGGGGGACGTAGCCGATGTTGTGGCGCAGTTCGCTGACATCGATCTGGCGAATGTCGACGCCATCAACCAGCAGCGAGCCACCATCGGCCTCGTAC‑AGGCCGACGATGAGCTTGGCCAGCGAGCTCTTGCCGGAGCCGCTGCGGCCGATGATGCCGACCTTCTCGCCAGGGCGGATGGTCAGGTTGATATTCTTCAGGGCCAGGTTCTGCTGGTTCGGATAAGTGAAGTCGACCCCGCGGAACTC > NC_002947/191769‑192065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |