| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,433:1 | +T | 6.1% | intergenic (‑51/+38) | trmE ← / ← oxaA | GTPase/membrane protein insertase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,433 | 1 | . | T | 6.1% | 1127.2 / 63.4 | 264 | intergenic (‑51/+38) | trmE/oxaA | GTPase/membrane protein insertase |
| Reads supporting (aligned to +/- strand): ref base . (119/129); new base T (10/6); total (129/135) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 284 total aligned reads displayed.
GCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCGGCAGGGAAC > NC_002947/6285‑6582 | gccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑g > 2:4061100/1‑150 (MQ=255) ccTTGGCAGCCTGAGGGCCGGACAACCTGACATTTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCTAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑gg < 2:4990310/150‑1 (MQ=255) ccTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑gg < 2:2081297/150‑1 (MQ=255) cTTGGCAGCCTGAGGGCCGGAAAACCTGAAAATTCCCACACCGCCCCGGCCCTGGGCGGTGGGTATGGGGGCTTTGGTTTCACGAACAGTGTTCTTGCTCTAAAGCCTCTACGAAAAAAACGACAGATAGCAAACACGCCCCACTAg‑ggg < 1:82185/150‑1 (MQ=255) cTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑ggg > 1:7362363/1‑150 (MQ=255) cTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑ggg > 1:1543003/1‑150 (MQ=255) ttGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑gggg > 1:7369096/1‑150 (MQ=255) ttGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAg‑gggg > 1:8780701/1‑150 (MQ=255) aGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGttt < 1:4459220/150‑1 (MQ=255) gCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGtttt > 1:1292833/1‑150 (MQ=255) ccAGAGGGCCGGACACCCTGCCACTTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGAGGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGCCAGATAGCAAAAACGCCCCACGAG‑GGGGCGttttt < 2:1603052/150‑1 (MQ=255) cAGCGGGCCGGACAACCGGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGCTGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATCGCAAAAACGCCCC‑CTAGTGGGGCGtttttg < 1:58147/150‑2 (MQ=255) agagGGCCGGACAACCTGACAATTCCCACCCCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTa < 2:7487746/150‑1 (MQ=255) agagGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTa < 2:7430004/150‑1 (MQ=255) gggCCGGCCAACCTGACAATGCCCACACCGCCCCGGCCCTGGGCCGGGGCGATGGGGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTCCCACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTc < 1:1788655/150‑1 (MQ=255) gCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGTAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTcac < 2:3615373/150‑1 (MQ=255) gCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCC‑CTAGTGGGGCGattttgctatct < 2:2895400/150‑8 (MQ=255) ccGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTcaca < 2:5434345/150‑1 (MQ=255) ggACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACTACCCACTAG‑GGGGCGTTTTTTATTCACAgg > 2:6958652/1‑150 (MQ=255) cTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGt > 2:1130797/1‑150 (MQ=255) cTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGt > 1:3814508/1‑150 (MQ=255) tGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCgga > 1:825258/1‑148 (MQ=255) tGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGtt > 1:4950818/1‑149 (MQ=255) gACACTTCCCACCCCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGAGGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAACACGACCGATCGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTAt < 2:192770/150‑1 (MQ=255) gACAAGTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCTATGGTTTCACGCACTGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTAt < 1:7735425/150‑1 (MQ=255) aCAATGCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACCGTGTTCAGGCTCGAAAGCCTCTACGAAAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTAtt < 1:361238/150‑1 (MQ=255) cAATTCCCACCCCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGTTGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTa < 1:3430931/150‑1 (MQ=255) cAATACCCACACCGCCCCGGCCCTGGGCCGTGGCGAGGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTa < 1:6399686/150‑1 (MQ=255) tCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCTAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGccc < 2:2347311/150‑1 (MQ=255) cccACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTCCGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTGTATTCACAGGCTCGCGGCTGAGCCCg > 1:869226/1‑150 (MQ=255) ccACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGt > 1:8300580/1‑150 (MQ=255) ccACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGt > 1:3155194/1‑150 (MQ=255) cacaCCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACACAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTGTATTCACAGGCTCGCGTATTAGCCCGTc > 2:6198388/1‑150 (MQ=255) cacaCCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTc > 2:3957453/1‑150 (MQ=255) acacCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACACAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCa > 2:202959/1‑150 (MQ=255) cccGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAag < 2:6513335/149‑1 (MQ=255) ccacGGCCCAGGGCCGGGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAagcagc > 2:5805090/4‑150 (MQ=255) gCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCtt > 2:5220334/1‑150 (MQ=255) ccTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCtttt > 1:9029279/1‑150 (MQ=255) tGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACTGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCtttttt < 1:6991088/150‑1 (MQ=255) tGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACTACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCtttttt < 2:7933919/150‑1 (MQ=255) tGGGCCGTGGCGAGGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCtttttt < 2:5154392/150‑1 (MQ=255) tGGGCCGTGCCGATGGCGGCGATGGTTTCACGCACAGTGTTCATCCTCGAAAGCCTCTACCACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCtttttt < 1:4030130/150‑1 (MQ=255) ccGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTa > 2:7054144/1‑150 (MQ=255) ccGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTATACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTa < 1:277220/150‑1 (MQ=255) cGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAgctgct > 1:3241637/1‑150 (MQ=255) gATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCtt > 2:453512/1‑150 (MQ=255) caTGGCGGCGAAGGTATCACGCACACTCAACAAGCTCGAAAGCCACTACCACAAAAACCACACATACCAAAAACCCCCCACAAG‑CGGCCGAAAAATATTCACAGGCTAGCGTATTACCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCtt < 2:7542164/149‑1 (MQ=255) agggcggcGATGGTTTCACGCACAGTGTACATGCACGAAAGCCACTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTc < 1:4573694/148‑1 (MQ=255) aTGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTc < 1:2218330/150‑1 (MQ=255) ggcggcGATGGTTTCACGCCCAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAACAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGa < 2:8137286/150‑1 (MQ=255) ggcggcGATGGTTACACGCACAGTGTTCATCCTCGAAAGCCTCTACCAAAAAAACCACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGa < 1:1075143/150‑1 (MQ=255) cgATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACgg < 2:1282463/150‑1 (MQ=255) gATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGc < 2:827978/150‑1 (MQ=255) tGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGa < 2:8780701/150‑1 (MQ=255) tGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGa < 2:3212426/150‑1 (MQ=255) tttCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTTGTAGCTGCTTCGATACGGCGAGTg > 1:4756495/1‑150 (MQ=255) tCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGAt < 2:1776245/150‑1 (MQ=255) tCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGAt < 1:5220334/150‑1 (MQ=255) cACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATg < 2:1004804/150‑1 (MQ=255) cACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATg < 2:2962638/150‑1 (MQ=255) gCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTAc > 1:5542667/1‑150 (MQ=255) gCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTGTTGTGGTAGCTGCTTCGATACGGCGAGTGATGTAc > 2:8476575/1‑150 (MQ=255) ttCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCActgctg > 2:7994136/1‑150 (MQ=255) tCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACtgctgc < 2:7739173/150‑1 (MQ=255) aTGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACATGCTAGCGTATTATCCCGTCAAGCAGCAGCTTTTTTTGTAGCTTCTTCGATACGGCGAGTGATGTACCACTGCTGCGa > 1:61291/1‑150 (MQ=255) tCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATc < 2:3274049/150‑1 (MQ=255) tCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATc > 2:3202202/1‑150 (MQ=255) tCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATc > 1:6074038/1‑150 (MQ=255) gAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGa > 1:4246582/1‑150 (MQ=255) ctctACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCa < 1:2230790/150‑1 (MQ=255) tctACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAg < 2:8889929/150‑1 (MQ=255) gACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgttgtt > 2:2553826/1‑150 (MQ=255) gACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgttgtt > 1:848369/1‑150 (MQ=255) gACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAgttgtt > 1:6664545/1‑150 (MQ=255) aaaaaCGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGc > 2:3840749/1‑140 (MQ=255) aaaaaCGACAGATAGCAAAAACGCCCCACGAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTcac > 2:2439802/1‑150 (MQ=255) cGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAAccc > 1:2025960/1‑150 (MQ=255) gACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCa < 1:303986/150‑1 (MQ=255) gACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCa > 2:5487237/1‑150 (MQ=255) gtgaataaaaaaCGCCCC‑CTAGTGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTa > 1:3921883/8‑150 (MQ=255) aGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTa > 1:7216722/1‑150 (MQ=255) aGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTa > 2:4876072/1‑150 (MQ=255) gATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTAc < 2:3437062/150‑1 (MQ=255) tAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTca > 2:1469884/1‑137 (MQ=255) tAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTca < 1:1469884/137‑1 (MQ=255) tAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAg > 2:8561332/1‑150 (MQ=255) aGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGc > 1:8891063/1‑150 (MQ=255) cAAACACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCAc < 2:9044298/150‑1 (MQ=255) aaaaaaCGCCCC‑CTAGTGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCAc > 1:2606609/2‑150 (MQ=255) aaaaaCGCCCC‑CTAGTGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCAcc > 1:7443525/1‑150 (MQ=255) aaaCGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAg > 1:3750291/1‑150 (MQ=255) aaaCGCCCC‑CTAGTGGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAg > 2:7270208/1‑150 (MQ=255) gCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTGTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCg > 2:6397866/1‑150 (MQ=255) gCCCCACGAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCg < 1:3912645/150‑1 (MQ=255) ccccACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCgg > 1:332170/1‑150 (MQ=255) ccACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCGGCa > 2:3796035/1‑150 (MQ=255) cACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCGGCAg < 1:5336690/150‑1 (MQ=255) aCTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAATACAGCACCAGACCGGCAgg < 2:5736379/150‑1 (MQ=255) aG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCGGCAGGGaa < 1:7164296/150‑1 (MQ=255) | GCCTTGGCAGCCAGAGGGCCGGACAACCTGACAATTCCCACACCGCCCCGGCCCTGGGCCGTGGCGATGGCGGCGATGGTTTCACGCACAGTGTTCATGCTCGAAAGCCTCTACGACAAAAACGACAGATAGCAAAAACGCCCCACTAG‑GGGGCGTTTTTTATTCACAGGCTAGCGTATTAGCCCGTCAAGCAGCAGCTTTTTTGGTAGCTGCTTCGATACGGCGAGTGATGTACCACTGCTGCGAAATCGACAGGCAGTTGTTCACAACCCAGTACAGCACCAGACCGGCAGGGAAC > NC_002947/6285‑6582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |