| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,392,927:1 | +A | 11.8% | intergenic (+91/‑95) | PP_1214 → / → ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,392,927 | 1 | . | A | 11.8% | 792.1 / 106.6 | 203 | intergenic (+91/‑95) | PP_1214/ruvC | transcriptional regulator/crossover junction endodeoxyribonuclease RuvC |
| Reads supporting (aligned to +/- strand): ref base . (84/95); new base A (8/16); total (92/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.19e-01 | |||||||||||
Only 100 of 214 total aligned reads displayed.
TGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGG > NC_002947/1392778‑1393076 | tGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑Gcc < 1:5449814/150‑1 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑Gcc‑c < 1:8615511/150‑1 (MQ=255) gCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑Gcc‑c < 1:4010249/150‑1 (MQ=255) aaCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CAttt < 2:9050679/150‑1 (MQ=255) aCGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTc < 1:6667090/150‑1 (MQ=255) cGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCa < 1:1377502/150‑1 (MQ=255) tCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCca‑a > 2:5208359/1‑150 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTCAACCCGCTCCTACAGGTATTAC‑GCC‑CCATTCAA‑At > 2:5220343/1‑150 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCCCTCCAACAGGTATTAA‑GCC‑CCTTTCAA‑At > 2:3439545/1‑150 (MQ=255) cTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGACCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑At < 1:997377/150‑1 (MQ=255) ttCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑Atgtg < 1:8293440/150‑1 (MQ=255) tCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATgtgg < 2:306564/150‑1 (MQ=255) tCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATgtgg < 2:7144281/150‑1 (MQ=255) ccAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATgtggt < 1:4764356/150‑1 (MQ=255) cAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATgtggtg < 1:5371972/150‑1 (MQ=255) caTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCATTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGc < 2:8491593/149‑1 (MQ=255) aaTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGc < 1:8790341/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCa < 2:3713488/150‑1 (MQ=255) aTGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCa < 2:4485229/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTAc < 1:6999786/150‑1 (MQ=255) ccAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCGCCTACAGGTATTAC‑GCC‑CAGTTCAA‑ATGTGGTGCAGTAc > 2:8936044/1‑150 (MQ=255) cAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCATTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTAcc < 2:373847/150‑1 (MQ=255) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGt < 2:6470448/150‑1 (MQ=21) aTTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGAG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGt < 2:8791150/150‑1 (MQ=255) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTa < 2:6612832/150‑1 (MQ=21) tttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGCGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTa < 1:5295225/150‑1 (MQ=18) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAg < 1:2615530/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAg < 2:5933822/150‑1 (MQ=255) ttCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAg < 2:6808804/150‑1 (MQ=255) tCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAgg < 1:6254083/150‑1 (MQ=255) ccGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTAGGa < 2:3877237/150‑1 (MQ=18) gacgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTAGGAGc < 2:6937427/150‑1 (MQ=18) gacgaGAACATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGCCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGc < 2:2555391/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCgg < 1:1703740/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCgg < 1:767000/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCgg < 1:767167/150‑1 (MQ=255) cgaGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCgg < 1:4656171/150‑1 (MQ=255) gagaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCggg < 1:272662/150‑1 (MQ=255) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTCTTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCGGTAGGAGCGGGtt > 2:9023981/1‑150 (MQ=255) gaTCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGtt < 1:4036150/150‑1 (MQ=255) tCATGGAGAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTa < 1:3629829/150‑1 (MQ=255) cATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTAc < 1:7596504/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTTAACCCGCGCCTACCGGTATTAC‑GCC‑CCATTCAA‑AAGTGGTGGAGGACCAGGAGGAGCGGGGTTTcc > 2:211680/1‑150 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTGAAACCGCTCCTACAGGTATTAC‑GCC‑CAAATGAA‑ATGTTGTGCAGTACCAGTGGGAGCGGGGTTagc > 1:6794463/1‑148 (MQ=38) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTAcc < 2:544691/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTAcc < 2:5004989/150‑1 (MQ=255) aTGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCGTTCGCGGGGAAAACCGCGCCAAAAGGTATTAC‑GCC‑CCATTGAA‑AAGTGGTGCCGTAACGGGTGGGGCGGGGTTagc > 1:6794609/1‑148 (MQ=255) ggAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCcg < 1:2528385/150‑1 (MQ=255) cGGCTATGGTGATTGGGCTTTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCGTGTGCGGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTTAA‑CTG‑GGCTTAATACCTGTAGGCGCGGGTTTACCCGCGAAAGGGc < 2:4759867/150‑1 (MQ=14) ggCTATGGTGTTTTGGCATTTGGTG‑CCAACTCTGAGGGTTTGATAGCGCCTGTGCGGGCCCTTTCGGGGTTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGGGGGTTTACCCGCGAAAGGGcc < 2:5773311/150‑1 (MQ=37) gCTATGGTTTTTTGGCTTTTTGTG‑CCAACTGTTTGCTTTTGATAGCGCCTGTGCCGGCCCTTTCGGGGGTAAACCCGCTCCTACTGTTTTTAC‑GCC‑AATTTCAA‑TTTTGGTGCAGTACCTGTAGGAGCGGGTTGACCCGCGAAAGGGCCg < 2:4795799/150‑1 (MQ=255) tAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAACAGGTATTAA‑GCC‑CATTTCAA‑ATGTGGTGCAGTAACTGGAGGATCGGGGTTAACCGCGAAAGGGCCCgc > 2:4484435/1‑150 (MQ=38) aaGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑AGGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGgcg > 2:7602112/1‑150 (MQ=255) tttGGGATTTTTTGCCCATCTGTTAGCTTTTGTTCGCGCCTGTCCGGGCCCTTTCGGGTTTAAACCCGATCCAACCGTTATTAC‑GCA‑ATTTTCAA‑ATGGGGTGCTCACCCTTTTGGAGCGGTTTTACCCGCGAAAGGGCCGGCGCAGttt < 2:7867758/150‑1 (MQ=255) aTTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCTCCAAAAGGTATTAC‑GCC‑CCATTCAA‑ATGTGGTGCAGTACCGGTAGGAGCGGGTTTACCCGCGAAAGGGGCGGCGCAGTTTGTAgaga > 2:2907118/1‑150 (MQ=37) tg‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAAACCGCGCCGACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCCGGAGGAGCGGGTTTTCCCGCGAAAGGGCCGGCGCCGTTTGTAGAGATGcatc > 2:4400798/1‑150 (MQ=37) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCACCTACAGGTATTAC‑GCC‑CATTTAAA‑AAGTGGTGCAGTACCAGTAGGAGCCGGTTTACCCCCGGAAGGGCCGGCGCAGGTTGTAGAGATGCATCCtt > 2:3690749/1‑150 (MQ=37) cAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTAGCGGGTAAAACCCCGCCAAAACGTATTAA‑GCC‑CAATTAAA‑AATTGGTGCCGTACCCGTGGGAGCGGGGTTACCCGCGCAAGGGCCGGCGCCGTGTGTGGTGCTTCATCAtt > 2:163042/1‑150 (MQ=255) ctctGCGCTTTTTATCGCGCGTGGCCCGGCCCTTTCGGGGTAAAACCCGGTCCTAC‑CGTTTTTC‑CCC‑CATTTAAATTTTTGGTGCATTACATTTCGTCGGGGTTTAACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCAttttt < 2:4894583/150‑1 (MQ=255) tttGATCGCGCCTGTGCCGGCCCTTTCGCGGTTAAACCCGCTCCTCCCGTTTTTAC‑GCC‑CATTTAAA‑ATGTGGTGCAGTACCTGTAGGAGCGGTTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGc < 2:2887896/150‑1 (MQ=37) tggcgcGTGTGCGGGCCGTTGCG‑GGGTTAACCCGGCCCCGCCGGTTTTACGGCC‑CTTTTATA‑TTGTGGTGCCTTACGTGTGGGTGGGGTTTTCCCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTAt < 2:4167978/148‑1 (MQ=255) cgcCTGTGCCGGCCCTTTCGCGGGTAAAACCCCTCCAACAGGGATTAC‑GCC‑CATTTCAA‑AAGTGGGGCAGTGCCGGTAGGAGCGGGTTTACCCGCGCAAGGGCCGGCGCCGGTTGTAGAGCTGCATCATTTTTTCGACGGGCTTTAttaa > 2:4515849/1‑147 (MQ=25) ccTGTGCCGGCCCTTTCGCGGGTAAAACCGCACCAACAGGGATTAA‑CCC‑CATTTAAA‑AAGTGGTGGAGTACCTGTAGGAGCGGGTTTTACCGCCCAAGGGCCGGCGCCGGTTGTAGAGAAGGATCATTTTTTAGACGGGCGTTTTGAcga > 2:8121733/1‑148 (MQ=19) tgCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGTATCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGAt < 2:6029560/150‑1 (MQ=255) gCCCTTTCGGGGTTAAACCCGCCCCTTCAGTTATTAC‑GCC‑ATTTTCAA‑CTGTGGTTCAGTACCTGTTGGAGCGGGTTTACCCGCGAATGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAg < 2:5833729/150‑1 (MQ=38) cgcgGTTAACCCCGCTCCTACCGGTATTCC‑GCC‑CATTTCAA‑AGTGGGTGCAGTACCTGTAGGAGCGGTTTTCCCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGa < 2:671623/150‑1 (MQ=255) gcgGGTACCCCCGCTCCCCCCGGTATTCC‑GCC‑CTGTTCAA‑TTGTGGTGCTGTACCTGTTGGCGGGGTTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAc < 2:7737907/150‑1 (MQ=255) gcgGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTGTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAc > 1:1493592/1‑150 (MQ=255) gggTAAACCCGCTCCTACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGAccc > 1:3357009/1‑150 (MQ=17) tAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCgg > 1:6156676/1‑150 (MQ=255) aCCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCGGGCGCAGTTTGTAGAGATGCATCATTTTTTCGAGGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTc > 2:733015/1‑150 (MQ=255) aCCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTc > 2:6106145/1‑150 (MQ=255) cccGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcg > 2:6366017/1‑150 (MQ=255) ccGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:3020454/1‑150 (MQ=255) ccGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 1:6407426/1‑150 (MQ=255) ccGCTCCTACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgc > 2:3534747/1‑150 (MQ=18) cGCTCCTACAGGTCTTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGACAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTcgcg > 2:6302244/1‑150 (MQ=255) gCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCgcgc > 1:8871883/1‑150 (MQ=255) tACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:735331/1‑150 (MQ=255) tACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:5127937/1‑150 (MQ=255) tACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:437600/1‑150 (MQ=255) tACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:4506199/1‑150 (MQ=255) tACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCAGCAc > 2:5203434/1‑150 (MQ=255) tACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:4313744/1‑150 (MQ=21) tACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 1:7886447/1‑150 (MQ=21) tACAGGTACTGC‑ACCACATTTGAA‑ATG‑GGCGTAATACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAc > 2:7232081/1‑150 (MQ=21) aCAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCAcc > 1:7359738/1‑150 (MQ=255) aGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 2:1069864/1‑150 (MQ=255) aGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 2:5618554/1‑150 (MQ=255) aGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCgg > 1:8474856/1‑150 (MQ=255) gTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 2:3818224/1‑150 (MQ=255) gTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCt > 1:1105/1‑150 (MQ=255) tATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTa < 1:5613398/75‑1 (MQ=255) gCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTa < 1:838999/112‑1 (MQ=255) gCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTa > 2:838696/1‑112 (MQ=255) gCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt > 1:6900087/1‑150 (MQ=255) gCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGt < 1:3840291/150‑1 (MQ=255) cc‑cATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTg < 1:1069806/150‑1 (MQ=255) c‑cATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 2:8073981/1‑150 (MQ=255) c‑cATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTgg > 2:2353434/1‑150 (MQ=255) | TGCAGAACGTCTATTCCAATGCCCAGATTTCCGACGAGATCATGGAAAACCTCGGCTAAGGTGATTTGGCATTTTGTG‑CCAACTCTGAGCGTTTGATAGCGCCTGTGCCGGCCCTTTCGCGGGTAAACCCGCTCCTACAGGTATTAC‑GCC‑CATTTCAA‑ATGTGGTGCAGTACCTGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCGCAGTTTGTAGAGATGCATCATTTTTTCGACGGGCTTTATGACTCTGATTCTAGGTATCGACCCCGGCTCGCGCATCACCGGCTATGGCGTGG > NC_002947/1392778‑1393076 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |