| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 251781 | 247 (0.900) | 13 (0.050) | 8/262 | NT | 5.3% | intergenic (+22/‑40) | PP_0201/PP_5432 | hypothetical protein/hypothetical protein |
| ? | NC_002947 | = 251799 | 234 (0.900) | intergenic (+40/‑22) | PP_0201/PP_5432 | hypothetical protein/hypothetical protein | |||||
TGCTGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/251626‑251781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggcAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTTGG < NC_002947/251799‑251651 TGCTGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATG > 1:6192431/1‑150TGCTGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATAACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATG > 1:8685506/1‑150 TGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCATCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCA > 1:4770983/1‑150 TGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCA > 2:8510262/1‑150 TGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCA < 2:2801498/150‑1 TGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCA > 1:2171135/1‑150 CTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCCGG > 2:8267261/1‑150 CTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGG > 1:941857/1‑150 TCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGC > 1:5111371/1‑150 CCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAACGCCAGGCAA < 1:1223520/147‑1 CCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAACGCCAGGCAA > 2:1223520/1‑147 TACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGA > 1:7471307/1‑150 AGGCGATGTCTCCCTGGAGGCGGGTGACCACGATCACCTGTTTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTTCGCGATCTGTGCTGATGTTTTAAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCT < 2:2154801/150‑1 AGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCT < 2:7471307/150‑1 AGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCT < 2:8245369/150‑1 TGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATT < 1:2897904/150‑1 TGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATT < 2:3387466/150‑1 TGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAACGCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATT < 1:8568226/150‑1 TACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTT < 1:3632411/150‑1 GGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAA < 2:5945402/150‑1 GGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTT < 1:6610322/106‑1 GGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTT > 2:6610322/1‑106 TGATGTTTTCAAACCAATGCCAGGC‑GGGCGTCGTGGACGGCTTGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCA > 2:2057312/1‑124 TGATGTTTTCAAACCAATGCCAGGC‑GGGCGTCGTGGACGGCTTGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCA < 1:2057312/124‑1 GCCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCG > 1:6636179/1‑150 CCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGC > 1:6033882/1‑150 CCAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGC > 2:8398244/1‑150 CAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCC > 1:1530032/1‑150 CAGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCC > 2:5268349/1‑150 AGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCT > 1:1718102/1‑150 AGGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATACTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCT > 1:6218812/1‑150 GGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTT < 2:7706430/150‑1 GGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTT < 1:2663481/150‑1 GGCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTT < 1:2663462/150‑1 GCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTTG > 2:4896782/1‑150 GCAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTTG > 1:8261500/1‑150 CAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTTGG < 1:1952434/150‑1 CAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGATTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCACTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTTGG < 1:8397031/150‑1 TGCTGCTCGACCCGAGTCTTACCCGCCAAGGCGATGTCTACCTGGAGGCGGGTGACCACGATCACCTGATTCACATGAGCATGGAGCAGTACATGAAACTGGTGCCGCACGCCGAAGTGCGCGAGCTGTGCTGATGTTTTCAAACCAATGCCAGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/251626‑251781‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccaggcAAGCCGTCCACGAC‑GCCCGCCTGGCATTGGTTTGAAAACATCAGCACAGCTCGCGCACTTCGGCGTGCGGCACCAGTTTCATGTACTGCTCCATGCTCATGTGAATCAGGTGATCGTGGTCACCCGCCTCCAGGTAGACATCGCCTTGG < NC_002947/251799‑251651 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |