| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | NC_002947 | 1,976,274 | 14 bp→TCGGCATCACATGC | 14.0% | intergenic (+59/‑93) | pheA → / → PP_1770 | bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 1976273 | 211 (0.770) | 31 (0.130) +TCGGCATCACATGC |
14/248 | NT | 14.0% | intergenic (+58/‑107) | pheA/PP_1770 | bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase |
| ? | NC_002947 | 1976288 = | 214 (0.780) | intergenic (+73/‑92) | pheA/PP_1770 | bifunctional chorismate mutase/prephenate dehydratase/3‑phosphoshikimate 1‑carboxyvinyltransferase | |||||
AGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1976139‑1976273‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTG > NC_002947/1976288‑1976433 |||||||||||||| AGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCT < 1:6001669/150‑1 CTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGG < 1:2373324/150‑1 CTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCATTGGGGCCGCGGCGCGGCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGG < 2:6548119/150‑1 GAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCCGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAG < 2:8477719/150‑1 AGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGC < 1:3634486/150‑1 CAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGACGGCGGTGCTTTGATTCAGGGGCCTTGGGGCCGCGGCGCGGCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGG < 1:2351419/150‑1 CAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGG < 2:7101242/150‑1 CAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGG < 2:6387719/150‑1 CAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGG < 1:7976213/150‑1 CAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGG < 1:4735437/150‑1 CGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTTTTTCAGGGGCCTTGGGGCTGCCTTGCGGCCGTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCTGCaa < 1:5622673/150‑3 TTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGG < 1:2110457/103‑1 TTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGG > 2:2110457/1‑103 GCCCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCAAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCA > 2:513066/1‑150 CCTTCGCGGGCTAGCCCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGC > 2:1618023/1‑150 CCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGC > 1:7129527/1‑150 CCGCTCCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGC > 2:6084730/1‑150 CCCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCA > 2:3730120/1‑150 CCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCTGCAAGGCAGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCAg > 2:7573115/1‑149 CCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCTGCAAGGCAGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCAT > 2:7573007/1‑150 CCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCAT > 1:5368083/1‑150 CCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCA > 2:3978360/1‑127 CCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCA < 1:3978360/127‑1 CCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTC < 2:3974313/109‑1 CCACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCATGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTC > 1:3974313/1‑109 CACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATC > 1:864648/1‑150 CACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATC > 2:695671/1‑150 CACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATC > 2:6010711/1‑150 CACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATC > 2:6010373/1‑150 CACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCGAGATTTATGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATC > 1:2703022/1‑150 ACAGAGATCGGCATCACATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCA > 1:9094277/1‑150 ACAGAGATCGGCATCACATGATCACTGTGGGAGCGGGCTAGCCCGCGAATGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTAACTAGATTTATGAACAGGGTTAGCACCAGTGGTAAATGCAGCAAAAAACAAACCCGCGCCCATCA > 1:1116255/1‑150 ATGCTCACTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTG > 2:6941907/1‑150 |||||||||||||| AGGCGGTGCTCGAGCAGATCAGCCAGGAGGCTGTGGCGCTGAAGGTGCTGGGCTCTTATCCGAAGGCGGTGCTTTGATTCAGGGGCCTTGGGGCTGCCTTGCAGCCCTTCGCGGGCATGCCCGCTCCCACAGTGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/1976139‑1976273‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TCTCTGTGGGAGCGGGCTAGCCCGCGAAGGGCCGCGCCGCGGCCCCAATGGCCCTCACAGGCTACCTAGATTTCTGAACAGGGTTCGCACCAGTGGTAAATGCAGCAAAAACCAAACCCGCGCCCATCATCGACCGCCTGGTCGTG > NC_002947/1976288‑1976433 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |