| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4350400 = | NA (NA) | 7 (0.030) | 4/266 | NT | NA | coding (202/1422 nt) | PP_3820 | group II intron‑encoding maturase |
| ? | NC_002947 | 4394823 = | NA (NA) | coding (158/1422 nt) | PP_3868 | group II intron‑encoding maturase | |||||
TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4350553‑4350400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC > NC_002947/4394823‑4394971 TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGG > 2:931153/1‑150TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGG < 2:2896798/150‑1TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGG > 2:8705741/1‑150TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGG > 2:6245084/1‑150TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGG > 2:6007761/1‑150TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGG < 2:5805475/150‑1TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGG > 2:549396/1‑150 TTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGCCAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGC < 2:2773656/150‑1 TTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGC < 1:821985/150‑1 TCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCG > 1:1316088/1‑150 CCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGT < 2:5878184/150‑1 CCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGT > 2:4963126/1‑150 CCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTG < 2:7774833/150‑1 CCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTG > 2:6266405/1‑150 CCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTG > 2:1984607/1‑150 GCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGT > 2:5362313/1‑90 GCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGT < 1:5362313/90‑1 CCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGC > 2:1212009/1‑150 CCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGC > 2:2454357/1‑150 GGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGTCCGGCTCCGCGTTCGTCCACGTCGCTGACGCCGCCGGCACCTTTGCACTGTCAGGCATCACCCTCGGCTTCTGGCCGGGATTCGGGATGACAGTTTCCGCTG > 1:7697298/1‑150 GGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTG > 1:6889197/1‑150 CACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGACGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGG > 1:5643735/1‑150 ACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTGTCCGGCTCCGCGTTCGTCCACGTCGCTGACGCCGCCGGCACCTTTGCACTGTCAGGCATCACCCTCGGCTTCTGGCCGGGATTCGGGATGACAGTTTCCGCTGTGGG > 2:5864762/1‑150 TGATGGAGCGGGTGCTTGCACCGGCCAACCTCA‑GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATT > 1:956214/1‑150 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC > 2:5237498/1‑150 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC > 2:5237051/1‑150 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC < 2:2855116/150‑1 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC < 2:5187643/150‑1 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC < 2:9073121/150‑1 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC < 2:4623598/150‑1 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC < 2:4623525/150‑1 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC < 1:1093460/150‑1 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC > 1:1537244/1‑150 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC > 1:3055324/1‑150 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC < 1:3399674/150‑1 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC > 1:4053495/1‑150 GCGTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGC > 1:5464829/1‑150 GTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAACTTTCTGCATTACGGTTACCAACGAGACGGCGACGCCT > 2:8372082/1‑150 GTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCT > 2:2909370/1‑150 GTGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCT > 2:2909352/1‑150 TGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTc > 2:6513567/1‑149 TGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTA < 1:6750002/150‑1 TGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTA < 1:4283669/150‑1 TGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTA < 1:7514718/150‑1 TGTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTA > 1:1037946/1‑150 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC > 1:6697765/1‑150 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC < 1:5489691/150‑1 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC < 1:6894040/150‑1 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC < 2:1996855/150‑1 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC > 2:6581350/1‑150 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC < 2:7706364/150‑1 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC < 1:190886/150‑1 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC > 1:1212229/1‑150 GTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC < 2:3641948/150‑1 TTTCCCACAGCGGAAACTGTCATCCCGAATCCCGGCCAGAAGCCGAGGGTGATGCCTGACAGTGCAAAGGTGCCGGCGGCGTCAGCGACGTGGACGAACGCGGAGCCGGACACGCTGATGGAGCGGGTGCTTGCACCGGCCAACCTCAGGCGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4350553‑4350400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgtgTCCGGCTCCGCGTTCGTCCACGTCACGGACGCCGTCGATACCTTTGCACTGTCAGGCGTCACCCTCGGCTTCTGGCCGGAGCTCGGGATGACAGTTTCCGCTGTGGGAAATTTCTGCATTACGGTTACCAACGAGACGGCGACGCCTAC > NC_002947/4394823‑4394971 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |