| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4589945 = | 293 (1.060) | 14 (0.050) | 8/264 | NT | 5.1% | intergenic (‑163/‑159) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase |
| ? | NC_002947 | 4590048 = | 237 (0.900) | intergenic (‑266/‑56) | PP_4063/ivd | long‑chain fatty acid‑‑CoA ligase/isovaleryl‑CoA dehydrogenase | |||||
GCACCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4590097‑4589945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCCA > NC_002947/4590048‑4590196 GCACCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAAAACGTCAGCAGGGTCACCGTCAATACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGG > 1:7961716/1‑150 CACCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGC < 1:7236411/150‑1 CACCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGC < 1:7236525/150‑1 CACCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGC < 1:3349184/150‑1 ACCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCG > 2:7530224/1‑150 CCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGG < 1:2092531/150‑1 TCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGcgccacg < 2:5095769/150‑8 CCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGG > 2:368571/1‑150 AGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGGCGTGGCGCCTCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCA > 1:6860090/1‑150 GCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGG‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACC > 1:2060778/1‑150 GCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGG‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACC > 1:2061900/1‑150 CCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCC > 1:6278909/1‑150 CCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCC > 1:1679325/1‑150 CCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGG‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCC > 2:8863866/1‑150 CCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGG‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCC > 2:8863971/1‑150 CCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCa > 2:5499785/1‑149 CCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCC > 2:914629/1‑150 CCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCAGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCC > 2:558893/1‑150 GCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGAGGGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCT > 2:1691802/1‑150 ATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGG > 1:2577735/1‑150 GCGGGCAAGCCCGCTCCCACAGAGGGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGC < 1:1691802/150‑1 GGGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGa < 2:8573556/150‑2 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:1104203/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:3412432/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:3927661/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:5832355/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:8281501/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:8281364/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:8281347/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGC < 1:4716402/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACCGGC < 1:7480111/150‑1 GGCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACATTCGTCGCCGCTGAACTGGC < 2:8153041/150‑1 GCGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCC > 1:2547532/1‑150 CGGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCC < 2:1253186/150‑1 GGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCC > 2:3089499/1‑150 GGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCC > 2:7706570/1‑150 GGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCC > 2:3065456/1‑150 GGGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCC > 1:4430848/1‑150 GGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCCA < 1:40460/150‑1 GGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCCA < 1:4908117/150‑1 GCACCTTCTTGTTCTTGAAATTGGGTTACACCATAGCTTGGGATCCGGCCCCGCCCCCTGTGGGAGCGGGCATGCCCGCGAATACGTCAGCAGGGTCACCGTCATTACCTGATTGGTCGCATTCGCGGGCAAGCCCGCTCCCACAGA‑GGGCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4590097‑4589945‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gggcggGGCCGGATCCCAAGCTATGGTGTAACCCAATTTCAAGAACAAGAAGGTGCCCCAGCATGCATTACCCCTCCCTGAACTTCGCCCTGGGCGAGACCATCGACATGCTCCGCGACCAGGTGCGCACCTTCGTCGCCGCTGAACTGGCCCCA > NC_002947/4590048‑4590196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |