New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	4904811 =	144 (0.520)	8 (0.030)	6/268	NT	5.4%	intergenic (+30/+89)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit
	?	NC_002947	4904845 =	140 (0.520)					intergenic (+64/+55)	PP_4310/PP_4311	hydantoin racemase/D‑amino acid dehydrogenase small subunit

TGGGGCGTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4904963‑4904811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTAC  >  NC_002947/4904845‑4904993                                                                                                                                                                                                                                                                                                                TGGGGCGTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCA                                                                                                                                                          <  1:3334136/150‑1   GGGCGTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGGCTCTTCGCGGCGAAAGCCCCTCCTACGAGGACCCCCCCGTATTCAGGCGTGTGCGGGTCCGGGAGGGGCGGCCTCAGC                                                                                                                                                        >  2:7069783/1‑150    GGCGTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCC                                                                                                                                                       >  2:8856252/1‑150    GGCGTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCC                                                                                                                                                       <  1:3899289/150‑1                               CAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTGATGCCGCTCCTACCGGACCAGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGC                                                                                                                            <  2:2793963/150‑1                                                                                             GCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGGCCGGTCGGAGCGGCATCAGCCTGAATACCGGGGGGTCCTCGTAGGAGCGGCTTTTGCCGCGACGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTG                                                              >  1:6323968/1‑150                                                                                                                    TTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAA                                       >  1:2952547/1‑150                                                                                                                      CAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACG                                     >  1:6544155/1‑150                                                                                                                      CAGGCTTGTGCTGGTCCGGTAGGAGCGGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACG                                     >  1:8408448/1‑150                                                                                                                          CTTGTGCTGGTCCGGTAGGAGCGGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCC                                 >  1:1364973/1‑150                                                                                                                           TTGTGCTGGTCCGGTAGGAGCGGCACAAGCCTGAATACCGAGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCA                                >  1:6057080/1‑150                                                                                                                               GCTGGTCCGGTAGGAGCGGCACAAGCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCC                            >  2:1158455/1‑150                                                                                                                                                      cGCCTGATTCCGGTGGGGCCCTCGTCGGGGGGGCTTTCGCCGCGACGCGCCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGG     <  2:6528114/149‑1                                                                                                                                                       GCCTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGT    >  1:8172696/1‑150                                                                                                                                                         CTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTAC  >  2:8646205/1‑150                                                                                                                                                         CTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTAC  >  1:3304864/1‑150                                                                                                                                                         CTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTAC  >  2:988739/1‑150                                                                                                                                                         CTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTAC  >  2:988743/1‑150                                                                                                                                                                                                                                                                                                                TGGGGCGTTAGGGTTCACCTTGGCCTGTGGCAGTGCGCAGCGTTTGGCCAGGATGATGCGTTAAGCGGGCCGGCCTCTTCGCGGCTAAAGCCGCTCCTACGAGGACCCCACGGTATTCAGGCTTGTGCTGGTCCGGTAGGAGCGGCATCAGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/4904963‑4904811 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑agccTGAATACCGTGGGGTCCTCGTAGGAGCGGCTTTAGCCGCGAAGAGGCCGGCCCGCTTAACGCATCATCCTGGCCAAACGCTGCGCACTGCCACAGGCCAAGGTGAACCCTAACGCCCCATGCCCCAGGTTCAGCCACAGGTTGCGGTAC  >  NC_002947/4904845‑4904993

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.