| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6079954 = | 251 (0.910) | 6 (0.020) | 4/268 | NT | 2.4% | coding (1250/1290 nt) | PP_5330 | MFS transporter |
| ? | NC_002947 | 6079998 = | 235 (0.880) | coding (1206/1290 nt) | PP_5330 | MFS transporter | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6080106‑6079954‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGGAACGCCTTGACCATGACATAAGGCACTGCGCCAATCACGCCC > NC_002947/6079998‑6080145 GTTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGT > 1:296409/1‑150GTTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGT < 2:8307866/150‑1GTTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGT > 2:5825753/1‑150GTTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGT < 2:2348868/150‑1 TTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTC > 1:8262861/1‑150 TTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTC > 1:3922696/1‑150 TCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCG < 2:3263660/150‑1 TCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCG > 2:3638925/1‑150 TCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCG < 2:3985054/150‑1 TCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCG < 2:4245088/150‑1 CGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCCAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCT > 1:5858875/1‑150 GCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCG > 2:6003315/1‑150 CCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGG > 2:1112276/1‑150 CCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGG > 2:5220771/1‑150 CCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGG > 2:8245620/1‑150 CGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGGA > 1:1343004/1‑150 TCGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGGAACGCCTTGACCATGACATAAGGCACTGCGCCAATCACGC > 1:3621510/1‑150 CGGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGGAACGCCTTGACCATGACATAAGGCACTGCGCCAATCACGCC > 2:4680889/1‑150 GGGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGGAACGCCTTGACCATGACATAAGGCACTGCGCCAATCACGCCC > 2:2491035/1‑150 GTTCCCGGCGGTGGTGCGTTTCAGCGGGTTGTCGTTCTCGTACAACGTGGCCTACGCGATCTTTGGCGGGCTGACGCCGATGGTGGTGACCGCACTGCTGAAGGTGAGCCCGATGGCGCCTGCCTACTACGTGGCAGGCCTGTGCGCCGTCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6080106‑6079954‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggGCTCACCTTCAGCAGTGCGGTCACCACCATCGGCGTCAGCCCGCCAAAGATCGCGTAGGCCACGTTGTACGAGAACGACAACCCGCTGAAACGCACCACCGCCGGGAACGCCTTGACCATGACATAAGGCACTGCGCCAATCACGCCC > NC_002947/6079998‑6080145 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |