New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 3949906129 (0.470)9 (0.040) 8/220 NT 7.1% coding (109/1797 nt) PP_3483 type II secretion system protein
?NC_002947 = 3949935 134 (0.610)coding (80/1797 nt) PP_3483 type II secretion system protein

Only 100 of 265 total aligned reads displayed.

GTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCG  >  NC_002947/3949758‑3950055
                                                                                                                                                    |                                                                                                                                                     
gTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGt                                                                                                                                                      <  2:2018939/150‑1 (MQ=255)
gTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGg                                                                                                                                                      >  1:3021463‑M1/1‑149 (MQ=255)
 tGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTa                                                                                                                                                     <  1:5923238/150‑1 (MQ=255)
    aGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACAt                                                                                                                                                  >  2:5304646/1‑150 (MQ=255)
      gtgtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATca                                                                                                                                                <  1:6959054/150‑1 (MQ=255)
      gtgtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATca                                                                                                                                                <  2:181501/150‑1 (MQ=255)
       tgtCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGTTCCCACAGGTACATcac                                                                                                                                               <  1:6733290/150‑1 (MQ=255)
         tCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAg                                                                                                                                             <  2:5035977/150‑1 (MQ=255)
           gggggTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGt                                                                                                                                           >  2:5180760/1‑150 (MQ=255)
           gggggTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACAGGTACGTCACAGGt                                                                                                                                           >  1:1062905/1‑150 (MQ=255)
               gtgtCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgt                                                                                                                                       <  1:1864977/150‑1 (MQ=255)
               gtgtCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgt                                                                                                                                       <  1:4571188/150‑1 (MQ=255)
                tgtCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCtgtg                                                                                                                                      <  1:9158298/150‑1 (MQ=255)
                  tCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTggg                                                                                                                                    >  1:4489195/1‑150 (MQ=255)
                    gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGGACAGCCCAGGTGTGGGGGCt                                                                                                                                  >  1:424474/1‑150 (MQ=255)
                    gCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacaggtac                                                                                                                                  >  2:6176813‑M1/1‑129 (MQ=255)
                     caggccaggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACCTCACAGGTCTGTGGGCTg                                                                                                                                 >  2:4908233/1‑150 (MQ=255)
                          caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATAc                                                                                                                            >  2:3880786/1‑150 (MQ=255)
                          caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATAc                                                                                                                            <  1:2374655/150‑1 (MQ=255)
                          caggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATAc                                                                                                                            >  2:2462653/1‑150 (MQ=255)
                           aggcGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACa                                                                                                                           >  2:4343496/1‑150 (MQ=255)
                             gCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATc                                                                                                                         >  1:2550596‑M2/1‑149 (MQ=255)
                             gCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGCCTGTGGGCTGCATACATc                                                                                                                         >  1:2550563‑M2/1‑149 (MQ=255)
                               gTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGGACATCACCGGTCTGTGGGCTGCATACAAccg                                                                                                                       >  1:1441580/1‑149 (MQ=255)
                                ttCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGATGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCCCAGGTACATCCCAGGTCTGTGGGCTGCATACATcctg                                                                                                                      <  2:1689315‑M2/150‑5 (MQ=255)
                                gtcCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCGTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCGGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctg                                                                                                                      >  2:8750946‑M2/2‑146 (MQ=255)
                                 tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGTCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGTGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgt                                                                                                                     >  2:3212890‑M2/1‑145 (MQ=255)
                                 tCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgt                                                                                                                     <  2:866672‑M1/150‑35 (MQ=255)
                                  ccAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtg                                                                                                                    >  2:8857853‑M2/1‑144 (MQ=255)
                                   cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCCGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACGGCGCCGGGCTGTGGGCTGCATACCTcctgtgg                                                                                                                   <  2:6713840‑M2/150‑8 (MQ=255)
                                   cAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgg                                                                                                                   >  2:68498‑M2/1‑143 (MQ=255)
                                    aGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACCGGTACATCACAGGTCGGTGGGCGGCATACAAccggtggg                                                                                                                  <  2:1728047‑M2/150‑9 (MQ=255)
                                    aGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATGTTTGCTGGGTTCTCCGCGGGCATGCCCGCTCCCACAGGTCCGTCACGGGTCTGTGGGCTGCATACATcctgtggg                                                                                                                  <  2:7589913‑M2/150‑9 (MQ=255)
                                     ggCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTAc                                                                                                                                                    >  1:4914556/1‑115 (MQ=255)
                                         gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                             >  2:695511‑M2/1‑137 (MQ=255)
                                         gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                             >  2:2885551‑M2/1‑137 (MQ=255)
                                         gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                             >  1:8324002‑M2/1‑137 (MQ=255)
                                         gTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgg                                                                                                             >  1:3897177‑M2/1‑137 (MQ=255)
                                          tCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcggg                                                                                                            >  2:8438323‑M2/1‑136 (MQ=255)
                                          tCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcggg                                                                                                            >  2:7776870‑M2/1‑136 (MQ=255)
                                           cGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggc                                                                                                           >  1:6742875‑M2/1‑135 (MQ=255)
                                             aGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcat                                                                                                         >  1:4294681‑M2/1‑133 (MQ=255)
                                                    gcTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcg                                                                                                  <  1:7385619‑M2/150‑25 (MQ=255)
                                                      tCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaa                                                                                                <  2:4140306‑M2/150‑27 (MQ=255)
                                                             tGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTGGGCTGCATACATCCGGTGGGAGCGGGCATGCCCGCGAAGACGTCg                                                                                         >  2:7159067/1‑150 (MQ=255)
                                                                 ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGc                                                                                     >  2:5937727/1‑150 (MQ=255)
                                                                 ttGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCGCCCACAGGTACATCCCAGGTCTGGGGGCTGCCTACATCCTGTGGGAGCGGGCCGGCCCCCGGAGACCTCggggg                                                                                     >  1:8693562/1‑147 (MQ=255)
                                                                    cAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAgg                                                                                  >  2:3574263/1‑150 (MQ=255)
                                                                                 gCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTcc                                                                     >  2:3853252/1‑150 (MQ=255)
                                                                                 gCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATAAATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTcc                                                                     >  2:6890951/1‑150 (MQ=255)
                                                                                   ctggaggTCGCGGGGGTAGGCGGAATTTTTGGCTGGGTTCTTCGCGGGCAGGCCCGCTCCCACCGGTCCAGCACAGGTGTGTGGGCTGCTTACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCgg                                                                   <  2:7361515/148‑1 (MQ=255)
                                                                                   cAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACAACCTGTGGGAGCGGGCATGCCCCCGAAGACCTCGGTGCAGGCTTTGCAGATTCCgg                                                                   >  2:209787/1‑150 (MQ=255)
                                                                                       aggTCGCGGGGGTAGGCGGAATTTTTTGCTGGGTTCTTCGCGGGCAGGCCCGCTCCCACAGGTACATCACCGGTCTGTGGGCTGAATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGtt                                                               <  2:4557078/150‑1 (MQ=255)
                                                                                                      gCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatg                                                                                                                            >  2:3204936‑M1/1‑47 (MQ=255)
                                                                                                      gCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatg                                                                                                                            <  1:3204936‑M1/74‑28 (MQ=255)
                                                                                                       ggtaattttttGGTGGTTTGTGCGGGGCCTGGCCCGCCCCCACGGTTACCCCCCCGGTCGGGGGGCTGCATCCACCCTGGGGGCGGGGGATTGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTg                                               <  2:773220/144‑1 (MQ=255)
                                                                                                        ggAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCGGTGGGCGGCATACATCCTGTGGGAGCGGGCCAGCCCGCGACGACGGCGGTGCAGGCGTTGCAGATGCCGGGGGTGCCTCGAATGCGTCTgg                                              >  1:5814524/1‑150 (MQ=38)
                                                                                                          aaaTTTTGGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCCCCGGTCTGTGGGCTGCATACATCGTGTGGGTGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCa                                            <  2:5513236/150‑1 (MQ=255)
                                                                                                                     gggTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGAc                                 >  2:4265356/1‑150 (MQ=255)
                                                                                                                            tcGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtac                                                                                                                         >  2:8910124‑M1/1‑25 (MQ=255)
                                                                                                                            tcGCGGGCATGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtac                                                                                                                         <  1:8910124‑M1/55‑31 (MQ=255)
                                                                                                                              gcgGACATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAg                        <  2:8924791/150‑1 (MQ=255)
                                                                                                                                gggCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAggg                      >  1:2165993/1‑150 (MQ=255)
                                                                                                                                gggCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAggg                      >  1:5236790/1‑150 (MQ=255)
                                                                                                                                gggCAGGCCCGCTCCCCCCGGTCCCTCCCCGGTCTGTGGGCTGCATCCATCGGGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAggg                      <  2:8971578/150‑1 (MQ=255)
                                                                                                                                gggCAGGCCCGCTCCCACCGGTCCACCCCAGGTCTGTGGGCTGCATACAGCCTGTGGGCGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAggg                      <  2:1211725/150‑1 (MQ=255)
                                                                                                                                   caggcccGCTCCCACCGGatgtatgcagcccacagacctgtgaggtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgc                   <  2:4862237‑M1/147‑133 (MQ=255)
                                                                                                                                    aTGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                  >  2:3092005‑M1/1‑17 (MQ=255)
                                                                                                                                    aTGCCCGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgct                  >  2:8685242‑M1/1‑17 (MQ=255)
                                                                                                                                       cccGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgc               >  1:6578714‑M1/1‑14 (MQ=255)
                                                                                                                                       cccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTc               >  1:4722144/1‑150 (MQ=255)
                                                                                                                                        ccGCTCCCACCGGaggtacgccgcccacagacctgtgaggtaccggtgggcgcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac              <  1:7691365‑M1/150‑138 (MQ=255)
                                                                                                                                        ccGCTCCCACCGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg              >  2:1209619/1‑150 (MQ=255)
                                                                                                                                        ccGCTCCCACAGGatgtatgcagcccacagccctgtgatgtccctgtgggcgcgggcaggcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac              <  1:7691370‑M1/150‑138 (MQ=255)
                                                                                                                                        ccGCTCCCACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac              >  2:1603340‑M1/1‑13 (MQ=255)
                                                                                                                                        ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgac              <  1:5043670‑M2/150‑109 (MQ=255)
                                                                                                                                        ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCg              >  2:5013018/1‑150 (MQ=255)
                                                                                                                                        ccGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCGCAGGGGCGCGTCg              >  1:8038627/1‑150 (MQ=255)
                                                                                                                                         cGCTCCCACGGTTACCCCCCGGGGCTGTGGGCTGAATACATCCTGTGGGAGGGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGc             <  1:2837858/150‑1 (MQ=255)
                                                                                                                                         cGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGc             >  1:1132189/1‑150 (MQ=255)
                                                                                                                                         cGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGc             >  2:6305947/1‑150 (MQ=255)
                                                                                                                                         cGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGc             >  1:4678620/1‑150 (MQ=255)
                                                                                                                                         cGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGc             >  1:6905232/1‑150 (MQ=255)
                                                                                                                                          gatCCAACAGGTAAAACACTCGTCTGGGGCCTGAATACATCCTTTGGGAGCGGGATTGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa            <  2:2300644/148‑1 (MQ=255)
                                                                                                                                          gCTCCCACGGGGACATCACTGGTCTGTGGTCTGCATACCTCGTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa            <  2:8739279/150‑1 (MQ=255)
                                                                                                                                          gCTCCCACCGGTACCCCCCCGGTCGGTGGGCTGCATACACCCGGGGGGCGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCa            <  2:1062905/150‑1 (MQ=255)
                                                                                                                                            tCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcc          <  1:6960306‑M2/150‑113 (MQ=255)
                                                                                                                                            tCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATcctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcc          <  1:5006479‑M2/150‑113 (MQ=255)
                                                                                                                                              ccACCGGTACAGCACAGGTCTGTGGTCTGCATCCATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCGGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct        <  2:2935684/150‑1 (MQ=255)
                                                                                                                                              ccACAGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctg        >  1:8288315‑M1/1‑7 (MQ=255)
                                                                                                                                              ccACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct        >  2:7413134/1‑150 (MQ=255)
                                                                                                                                              ccACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAggct        >  2:360907/1‑150 (MQ=255)
                                                                                                                                                acaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctgga      >  1:8023578‑M1/1‑5 (MQ=255)
                                                                                                                                                acaGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctgga      >  1:9036737‑M1/1‑5 (MQ=255)
                                                                                                                                                 caGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaa     <  2:7996172‑M1/150‑147 (MQ=255)
                                                                                                                                                  cggatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaac    <  2:6670224‑M1/149‑148 (MQ=255)
                                                                                                                                                  cggatgtaggcagcccacagacctgtgatggaccggtgggcgcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaac    <  1:1441256‑M1/149‑148 (MQ=255)
                                                                                                                                                  cggaggtatgcagcccccagaccggggctgtaccggtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgaccgcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaac    <  2:4972770‑M1/149‑148 (MQ=255)
                                                                                                                                                  aGGatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaac    >  1:4244206‑M1/1‑3 (MQ=255)
                                                                                                                                                    gatgtatgcagcccacagacctgtgatgtacctgtgggagcgggcatgcccgcgaagaacccagcaaaaatttccgcctacccccgcgacctcctggcccaggcccgtctgcaagccactgacgagcgcctgctcgactgcctggaacgc  <  1:2052249‑M1/150‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GTGAAGGTGTCGGGGGTGTCGCAGGCCAGGCGTTCCAGGCAGTCGAGCAGGCGCTCGTCAGTGGCTTGCAGACGGGCCTGGGCCAGGAGGTCGCGGGGGTAGGCGGAAATTTTTGCTGGGTTCTTCGCGGGCATGCCCGCTCCCACAGGTACATCACAGGTCTGTGGGCTGCATACATCCTGTGGGAGCGGGCATGCCCGCGAAGACGTCGGTGCAGGCTTTGCAGATTCCGGGGTTGCATCGAATGCTTCTGGCATGGCCTGCGACTCCGCTCAGGGGCGCGTCGCAGGCTGGCTCG  >  NC_002947/3949758‑3950055

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.