New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 4535545166 (0.600)12 (0.050) 6/252 NT 7.5% intergenic (+21/‑153) PP_4020/cpo oxidoreductase/non‑heme chloroperoxidase
?NC_002947 = 4535610 143 (0.570)intergenic (+86/‑88) PP_4020/cpo oxidoreductase/non‑heme chloroperoxidase

Only 100 of 217 total aligned reads displayed.

TCGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACAC  >  NC_002947/4535397‑4535693
                                                                                                                                                    |                                                                                                                                                    
tcGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGc                                                                                                                                                     <  1:4939761/150‑1 (MQ=255)
  ggCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCgg                                                                                                                                                   >  2:6867406/1‑150 (MQ=255)
  ggCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCgg                                                                                                                                                   <  1:8990465/150‑1 (MQ=255)
   gCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCggg                                                                                                                                                  <  2:2078306/150‑1 (MQ=255)
    cGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGc                                                                                                                                                 <  1:2065616/150‑1 (MQ=255)
    cGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGc                                                                                                                                                 <  1:7364913/150‑1 (MQ=255)
      aTGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCct                                                                                                                                               <  1:1011374/150‑1 (MQ=255)
        gAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCAGTGCGGGccaca                                                                                                                                             >  2:3199240/1‑147 (MQ=255)
            aCCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGTGCGGGCCGCGTcgc                                                                                                                                         >  2:6725/1‑150 (MQ=255)
              cTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCgg                                                                                                                                       <  2:7022164/150‑1 (MQ=255)
              cTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCgg                                                                                                                                       <  1:7864425/150‑1 (MQ=255)
              cTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCgg                                                                                                                                       <  2:3353041/150‑1 (MQ=255)
              cTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCgg                                                                                                                                       <  2:3096369/150‑1 (MQ=255)
              cTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCgg                                                                                                                                       <  1:4400676/150‑1 (MQ=255)
               tGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCTGTGCGGGCCGCGTGGCggg                                                                                                                                      >  2:4794861/1‑150 (MQ=255)
               tGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCggg                                                                                                                                      >  2:5394144/1‑150 (MQ=255)
                    gcgcTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGaaa                                                                                                                                 <  2:3925525/150‑1 (MQ=255)
                    gcgcTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCAGGTGaaa                                                                                                                                 <  1:6455219/150‑1 (MQ=255)
                     cgcTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAg                                                                                                                                <  2:6633737/150‑1 (MQ=255)
                      gcTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCTGTGCGGGCCTCGTCGCGGGGGAAAgg                                                                                                                               >  2:7924893/1‑150 (MQ=255)
                      gcTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAgg                                                                                                                               <  1:4557307/150‑1 (MQ=255)
                      gcTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAgg                                                                                                                               <  2:2650676/150‑1 (MQ=255)
                        tGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGa                                                                                                                             <  2:2382845/150‑1 (MQ=255)
                         gTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGAc                                                                                                                            <  1:2545138/150‑1 (MQ=255)
                         gTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGAc                                                                                                                            <  2:7949435/150‑1 (MQ=255)
                         gTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCACTTCGCGGGTGAAAGGGAc                                                                                                                            >  2:667073/1‑150 (MQ=255)
                           aCCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCTGTGCGGGCCGCATCGCGGGTGGAAGGGGccg                                                                                                                          >  2:1858374/1‑149 (MQ=255)
                            ccAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCAGTGCGGGCCTCTTCGCGGGTGAAAGGGAccgc                                                                                                                         >  2:8309140/1‑148 (MQ=255)
                             cAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCTGTGCGGGCCTCTTCGCGGGGGGAAGGGACCGca                                                                                                                        >  2:3454801/1‑150 (MQ=255)
                               aGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTcaca                                                                                                                      <  2:4401115/150‑1 (MQ=255)
                               aGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTcaca                                                                                                                      <  2:6439845/150‑1 (MQ=255)
                               aGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTcaca                                                                                                                      <  1:1183471/150‑1 (MQ=255)
                                  cATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAgtg                                                                                                                   >  1:861616/1‑150 (MQ=255)
                                   aTCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGaaa                                                                                                                                 >  2:2312923/1‑135 (MQ=255)
                                   aTCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGaaa                                                                                                                                 <  1:2312923/135‑1 (MQ=255)
                                    tCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTa                                                                                                                 <  1:2479013/150‑1 (MQ=255)
                                    tCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTa                                                                                                                 <  1:6087342/150‑1 (MQ=255)
                                    tCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCACACAGTGTa                                                                                                                 <  1:5394141/150‑1 (MQ=255)
                                           cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGGGCGGGCCGCGACGCGGGGGGAAGGGGCCCCCCAGTGGAGGGGCgg                                                                                                          >  2:4055045/1‑150 (MQ=255)
                                           cGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg                                                                                                          <  1:3696514/150‑1 (MQ=255)
                                           cGGCCGCGTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCgg                                                                                                          <  2:2685454/150‑1 (MQ=255)
                                            ggCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCggg                                                                                                         <  2:1190090/150‑1 (MQ=255)
                                             gCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCGGTGCGGGCCTCGTCGCGGGGGAAAGGGGCCACACAGGGTAGGAGCGGGt                                                                                                        >  2:8622843/1‑150 (MQ=255)
                                              ccGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGtt                                                                                                       <  1:5649167/150‑1 (MQ=255)
                                                gCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGcgggcctcttcgcgggtgaacccgctcctacactgtgaggtccctttca                                                                                                     <  2:8605919‑M1/150‑50 (MQ=255)
                                                gCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGcgggcctcttcgcgggtgaacccgctcctacactgtgaggtccctttca                                                                                                     <  2:6151882‑M1/150‑50 (MQ=255)
                                                gCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCa                                                                                                     <  2:8489356/150‑1 (MQ=255)
                                                  ttCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCGCTTAGCGGGGGAAAGGGACCACACAGGGTAGGATCGGGTTGAcc                                                                                                   >  2:1393271/1‑150 (MQ=255)
                                                     cccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGc                                                                                                <  2:7477434/150‑1 (MQ=255)
                                                      ccGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGTCCTCACAGTGTAGGGGCGGGTTCACCAGCg                                                                                               >  2:7443424/1‑150 (MQ=255)
                                                       cggcggCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCGCTGCGCGGGGGGAAGGGGCCACACCGTGTAGGGGCGGGGTAACCAGCGa                                                                                              >  1:2216463/1‑150 (MQ=255)
                                                        ggcggcGACCTGCTTGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGtgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaa                                                                                             <  2:575413‑M1/150‑58 (MQ=255)
                                                        ggcggcGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGcgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaa                                                                                             <  2:8704243‑M1/150‑58 (MQ=255)
                                                         gcggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAag                                                                                            <  2:3707010/150‑1 (MQ=255)
                                                          cggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGtgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaaga                                                                                           <  1:7464815‑M1/150‑60 (MQ=255)
                                                          cggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAaga                                                                                           <  1:3488549/150‑1 (MQ=255)
                                                           ggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATGAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACTTTGTAGTAGCGGGTTCTCCTGCGAagat                                                                                          <  2:4740918/150‑2 (MQ=255)
                                                           ggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAagag                                                                                          <  1:103537/150‑1 (MQ=255)
                                                           ggcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAagag                                                                                          <  1:7039529/150‑1 (MQ=255)
                                                            gcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGtgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaagagg                                                                                         <  1:7530894‑M1/150‑62 (MQ=255)
                                                            gcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAgg                                                                                         <  1:2664258/150‑1 (MQ=255)
                                                            gcgACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAgg                                                                                         <  2:536646/150‑1 (MQ=255)
                                                                  tgctgGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCTGTGCGGGCCGCTTCGCGGGGGCAAGGGGCCTCCCCGGGTAGGCGCGGGGTCACCGGCGACAAGGCCCAca                                                                                   <  2:6214300‑M2/150‑3 (MQ=255)
                                                                  tgctgGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCGGTGCGGGCCGCGTCGCGGGGGAAAGGGACCGCAAAGGGTAGGAGCGGGGTCACCAGCGAAGAGGCCCAca                                                                                   <  2:2006603‑M2/150‑3 (MQ=255)
                                                                    ctggctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcaca                                                                                 >  1:6683947‑M2/1‑146 (MQ=255)
                                                                       gctgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggc                                                                              >  2:8785148‑M2/1‑143 (MQ=255)
                                                                         tgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAagag                                                                                          <  1:4546761/136‑1 (MQ=255)
                                                                         tgCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAagag                                                                                          >  2:4546761/1‑136 (MQ=255)
                                                                          gcgcCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCAcacaggcaac                                                                           >  1:1367684‑M2/1‑140 (MQ=255)
                                                                              cTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAgg                                                                                         >  2:8373279/1‑132 (MQ=255)
                                                                               tttGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCAGTTCGGGCCAAAAAGCGGGTGTAAGGGACCGCACACTGTAGGAGCCGGGTCACCAGCGAAGAGGCCCACACACCCAAAACaaa                                                                      >  2:1708815/1‑149 (MQ=255)
                                                                                  gtatgCTGGGGCATCGGCCGGGTACCGCTGGCGCGACGGTTTGTGATGGGATTCTGTGTTGCTTGTGGGGGCCTGTTGGGGGGTGAATGGGACCTCACTGTTTTGGTGGGGTTTCACCTGCGAAGAGGCCCACACTGGCAACACAACTTc                                                                   <  2:114837/146‑1 (MQ=255)
                                                                                   gAAGCTGCGGCAACGGCCTGGTACCGCTTGCGCGAGCGTGTCTGAAGGGCATCTGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAATGGGACCTCACTGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTcc                                                                  <  2:7336715/150‑1 (MQ=255)
                                                                                   gAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGACGGGCAACAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGTACCACACAGTGTAGGTGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTcc                                                                  <  2:1485237/150‑1 (MQ=255)
                                                                                   gAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGGCTGTGCGGGCCGCATCGCGGGTGTAAGGGACCCCCCCCTGGGGGGGCGGGGTCACCAGCGAAGAGGCCCACCCACGCAAcaccacagcc                                                                  >  2:8677901/1‑146 (MQ=255)
                                                                                   gAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCAc                                                                                                    >  2:4843748/1‑116 (MQ=255)
                                                                                      gCTGCGGCAACGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGGGGTTGAAAGGGACCTCACAGTGTAGGAGCGGTTTCACCTGCGAAGAGGCCAACACAGGCAACACAACTTCCTGa                                                               <  2:8004895/150‑1 (MQ=255)
                                                                                        tGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCAGTGCGGGCCGCGTCGCGGGTGGAACGGGCCGCCCAGTGTAGGAGCGGGGTCACCAGCGCACAGGCCCACACAGGCAACACCACATCCGGATa                                                             >  2:5851747/1‑150 (MQ=255)
                                                                                          cgcaaaaGCCCTGGTACCCCATCCCCCACCGTGTCTCAACGCCACCAGTGTTCCCCGTGCGCCCCACTCCCCGGCTCAAAGGCACAAAACAGTGTAGCAGCGGCTACACCTCCGAAGACCCCAACACAGCCAACACAACTTCCTGATAcc                                                           <  2:2001438/146‑1 (MQ=255)
                                                                                          cGGCAACGGCCTGGTACCGCATGCGCGACCGTGTCTGATGGGAATCTGTTTTGCGTGTGGGGGCCTCTTCGGGTGTGAAAGTGACCTCACTGTGTTGGAGCGGGTTCACCTGCGAATAGGCCCACACAGGCAACACAACTTCCTGATAcc                                                           <  2:4835090/150‑1 (MQ=255)
                                                                                             cAACGGCCTGTTACCGATTGCGCTACGGTGTCTGAAGGGCATCTGTGTTGCCTGTGCGGGCCTCTTCGCGGGTCAACGGGACCTCAAAGTTTAGGAGCGGGTTCACCTGCTACTAGGCCCACACAGGCAACACAACTTCCTGATACCCGc                                                        <  2:6989266/150‑1 (MQ=255)
                                                                                             cAAAGGCCTGGTACCGCATGGGCGACCGTTTCTGACGGGCATCTTTGTTGCCTGTGGGGGCCTCTGGGGGGGTTAATGGGACCTAACTGTGTTGGTGCGGGTTCACCGGCGAAGTGGCCCACACTGGCAACACAACTTCCTGATACCCGc                                                        <  2:5378658/150‑1 (MQ=255)
                                                                                                        ttccGCATGCGCGACGGTGTCTGTCGGGCATCTGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAACGGGACCTCACAGTGTTGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc                                             <  2:5222828/148‑1 (MQ=255)
                                                                                                        tACCGCATGCGCGACGGTTTCTTATGGGATTCTGTGTTGCGTGTGCGGGCCTCTTCGCGGTTTAAAGGGACCTCACATTGTAGGAGCGGTTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc                                             <  1:7495503/150‑1 (MQ=255)
                                                                                                        tACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCGTGTGCGGGCCTCTTCGCGGGTGAATGGGACCTCACTGTTTTGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc                                             <  1:7496226/150‑1 (MQ=255)
                                                                                                        tACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTAACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc                                             <  2:2832053/150‑1 (MQ=255)
                                                                                                        gaCCGCCTGCGCGACCGTGTCTGATGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCCCAGTGTAGGAGCGGGTTCACCGGCGACGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCcctc                                             <  2:7497673/149‑1 (MQ=255)
                                                                                                                   cgACGGTGTCTGAAGGGCATCTGTGTTGCCTGTGCGGGCCTCTTCGGGGGTTAATGGGACCTAACAGTGTTGGTGCGGTTTCACCTGCGAAGAGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAAt                                  <  1:6776356/150‑1 (MQ=255)
                                                                                                                             tGAAGGGCATCAGTGTTGCCGGTGCGGGCCTCGTCGCGGGGGAAAGGGACCTCACAGTGTAGGAGCCGGTTCTCCAGCGAAGAGGCCCACCCAGGCAACACAACATCCTGATACCCGCCCAAAAACCGCCGATTCTAAATAGCTCCCATc                        >  2:1499758/1‑150 (MQ=255)
                                                                                                                                  ggCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACTGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTc                   <  2:565288/150‑1 (MQ=255)
                                                                                                                                  ggCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTc                   <  2:5999797/150‑1 (MQ=255)
                                                                                                                                    cATCTGTGTTGCGTGTGGGGGCCTGTTGGCGGGTGAATGGGACCTCACTGTGTTGGTGCGGGTTCACCTGCGAAGAGGCCCACACTGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCt                 <  2:4929619/150‑1 (MQ=255)
                                                                                                                                              gCCTGTGtgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagc       >  1:7963306‑M1/1‑7 (MQ=255)
                                                                                                                                              gCCTGTGtgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagc       >  2:4565638‑M1/1‑7 (MQ=255)
                                                                                                                                                cTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGgaga     >  1:8168291/1‑150 (MQ=255)
                                                                                                                                                cTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCAGcacaggcaacaatgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcaccca     <  2:5514377‑M2/150‑81 (MQ=255)
                                                                                                                                                 tgtgtgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccag    >  1:8578817‑M1/1‑4 (MQ=255)
                                                                                                                                                 tgtgtgggcctcttcgcaggtgaacacgctcctacacagtgaggtccctttcacccgcgaagaggcccgcacaggcaacacagatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccac    >  1:7354366‑M1/1‑4 (MQ=255)
                                                                                                                                                  gtgtggccctctacgcaggtcaacccccaccaacactgtcagcccccttacacccgccaagagccccgcacagccaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagc   <  2:691638‑M1/150‑148 (MQ=255)
                                                                                                                                                   tgtgggcctcttcgcaggtgaacccgctcctacactgtgaggtccctttcacccgcgaagaggcccgcacaggcaacactgatgcccttcagacacggtcgcgcatgcggtaccaggcctttgccgcagcttccaaaggcgcagccagca  >  1:4286500‑M1/1‑2 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
TCGGCGATGAAGACCTGTTGGCGCTGTACCAAGGCATCGACAACGGCCGCTTCCCCGGCGGCGACCTGCTGGCTGCGCCTTTGGAAGCTGCGGCAAAGGCCTGGTACCGCATGCGCGACCGTGTCTGAAGGGCATCAGTGTTGCCTGTGCGGGCCTCTTCGCGGGTGAAAGGGACCTCACAGTGTAGGAGCGGGTTCACCTGCGAAGAGGCCCACACAGGCAACACAACTTCCTGATACCCGCCAAAATCCCTCCTATTCTCAATAGCTCCCTTCGCTTCCTGCACCCAGGAGACAC  >  NC_002947/4535397‑4535693

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.