New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 18210270 (0.000)10 (0.040) 4/266 NT 100% coding (748/1422 nt) PP_1624 group II intron‑encoding maturase
?NC_002947 = 2072298 NA (NA)coding (707/1422 nt) PP_1846 group II intron‑encoding maturase

CGATCGGGTCAATCACGACATCCTCATGGCCTGCATCGAACGTCGGATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCG  >  NC_002947/2072176‑2072375
                                                                                                                          |                                                                             
cgctCGGGTCAATCACGACATCCTCATGGCCTGCATCGAACGTCGGATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAggcgg                                                    <  2:7542540/147‑1 (MQ=1)
              ccgccATCCTCCGGGCCTGCATCGAACGTCGGAGCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGTGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGt                                      <  1:7807974/146‑1 (MQ=1)
                                                  aacaCAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTCAAGCCGGCATCATGTCGGGCGGTGTCGACAGCCCACGGCAGGAGGGGACGCCGCAAGGCGCCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACcgcg  <  1:8893912/147‑1 (MQ=1)
                                                                                                                          |                                                                             
CGATCGGGTCAATCACGACATCCTCATGGCCTGCATCGAACGTCGGATCAAAGACAAGTGCGTACTCAGGCTTATTCGCCGCTACCTTGAAGCCGGGATCATGTCGGGCGGTGTCGTCAGCCCACGGCAGGAGGGGACGCCGCAAGGCGGCCCGCTTTCGCCGTTGCTGTCGAATATCCTGCTCGACGAACTCGACCGCG  >  NC_002947/2072176‑2072375

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.