BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5818849	89 (0.320)	26 (0.110)	14/240	NT	21.9%	intergenic (+57/+72)	PP_5092/pilT	NLP/P60 protein/twitching motility protein
*	?	NC_002947	= 5818876	108 (0.450)	26 (0.110)	14/240	NT	21.9%	intergenic (+84/+45)	PP_5092/pilT	NLP/P60 protein/twitching motility protein

Only 100 of 205 total aligned reads displayed.

AAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGC  >  NC_002947/5818727‑5819023

    aCTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAaacc                                                                                                                                                 <  1:6035620‑M2/150‑5 (MQ=255)

     cTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacct                                                                                                                                                >  1:5505812‑M2/1‑145 (MQ=255)

      tACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCAAGCCCGCAACCACAGGGAGAGCGGCGCTCTCGCGCGCAGCGCACAtaccgg                                                                                                                                               <  1:7543964‑M2/150‑7 (MQ=255)

       gcggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgt                                                                                                                                              >  1:1997297‑M1/83‑150 (MQ=255)

        cGTTGTGGCCAAGCGGGTGCTGCCGTAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                                                             >  2:329117‑M2/1‑142 (MQ=255)

        cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                                                             >  1:2727123‑M2/1‑142 (MQ=255)

        cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                                                             >  2:6336331‑M2/1‑142 (MQ=255)

        cGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtg                                                                                                                                             >  1:3555433‑M2/1‑142 (MQ=255)

         gtggtgGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgg                                                                                                                                            >  2:2928708‑M2/1‑141 (MQ=255)

         ggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaGGCCCTTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                                                                            >  2:2095984‑M1/81‑150 (MQ=255)

         ggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaGGCCCTTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                                                                            >  2:4384053‑M1/81‑150 (MQ=255)

         ggaggggatgctgacgatggagggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaGGCCCTTCCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTgg                                                                                                                                            >  1:1751867‑M1/81‑150 (MQ=255)

          tggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGTAGCGCGTCGCGCGCGCGCGCAGCTCACAtacctgtggg                                                                                                                                           <  2:4453614‑M2/150‑11 (MQ=255)

           ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCATAtacctgtggga                                                                                                                                          >  2:8413688‑M2/1‑139 (MQ=255)

           ggtggCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCGTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtggga                                                                                                                                          >  2:9108208‑M2/1‑139 (MQ=255)

             gggcCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagc                                                                                                                                        >  2:3561937‑M2/2‑137 (MQ=255)

               gCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgg                                                                                                                                      >  2:591761‑M2/1‑135 (MQ=255)

                  aaGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCCCCCCCCCACCCACACGTAGCCCGGAGCACACGCCCGCCCCGCACAAACCCCTGGGGGcgcgcg                                                                                                                                   >  1:5771122/1‑150 (MQ=255)

                   aggggatgctgcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgc                                                                                                                                  <  1:4333191/144‑1 (MQ=255)

                   aGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGgcgc                                                                                                                                  <  1:3843055/150‑1 (MQ=255)

                     gacgagggtgggggcgtggcggaggctgtgggagcgagggttggacaaaggcttgtagtacctgcaaaGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTGGCGCGCAGCTCACATACCTGTGGGAGCGGgcgcgc                                                                                                                                >  1:3809325‑M1/69‑150 (MQ=255)

                            tgcCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCCCAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACCTACCCGTGGGAGCGGGCGCGCCCGCGaa                                                                                                                         >  2:7117531/1‑150 (MQ=255)

                              gggggcgttgcggaggctgagggagcgagggttgatcaaaggcttgtagtacctgcaaaGGCCCTTTCGCGGGCGCGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCtgt                                                                                                                                              <  1:29544‑M1/68‑1 (MQ=255)

                              ccGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGCACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGGCGCTCGCGCGCGCAGCTCACATACCTGTGGGGGCGGGCGCGCCCGCGAAAg                                                                                                                       >  2:2148407/1‑150 (MQ=255)

                               cGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCCCGCCCCCACCCACCCGTAGCGCGGCGCGCGCGGGCGCCGCGCGCCAACCCTGGGGTGCGGGCGCGCCcccggcagg                                                                                                                      >  1:2020190/1‑145 (MQ=255)

                                gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAggg                                                                                                                     >  2:7437950/1‑150 (MQ=255)

                                gAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAAACCTGTGGGAGCGGGCGCGCCCGCGAAAagg                                                                                                                     >  2:5277205/1‑150 (MQ=255)

                                 aaaGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCCCGCCCACCCGGAGGGCCTCGCGGTCGCGCGCAGCGCCCCGACCAGGGGGGGCGGGGGCGGCCCCGGAAgggg                                                                                                                    >  1:549696/1‑149 (MQ=255)

                                     agcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCttt                                                                                                                <  2:4754893/150‑1 (MQ=255)

                                     agcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCttt                                                                                                                <  2:1486537/150‑1 (MQ=255)

                                     agcagcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACCCCCGCTCCCCCCGGTAGCGCGGCGCTCTCGCGCGCAGCGCACCTACCGGGGGGCGCGGGGGCGCCCGCGGAAGGGccggg                                                                                                                >  2:2628345/1‑147 (MQ=255)

                                        agcagcTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCGCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACCTACCGGTGGGAGCGGGCGCGCCCCCGAAACGGCCGTTGCa                                                                                                             >  2:3207226/1‑150 (MQ=38)

                                                  tCTGGCCAAGCTTTCAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGTCTTTGCAGGTACTACaa                                                                                                   <  1:2568340/150‑1 (MQ=255)

                                                      gCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCAGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCt                                                                                               <  1:5656044/150‑1 (MQ=255)

                                                      gCCAAGCGTTAAGCTGAGCGGCTCTATCCGGTACCGGCCCCGGCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGCGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCt                                                                                               <  1:4633279/150‑1 (MQ=38)

                                                       ccAAGCTTTATGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCCCGCCCGCTCCCACCGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCtt                                                                                              <  1:6545451/150‑1 (MQ=255)

                                                        cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                                                                             <  1:6089816/150‑1 (MQ=255)

                                                        cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCttt                                                                                             <  2:1743893/150‑1 (MQ=255)

                                                        cAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCgtt                                                                                             >  2:7512350/1‑150 (MQ=255)

                                                            cGTTAAGGTGATCGGCGCTATCGGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGCGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATc                                                                                         <  1:966305/150‑1 (MQ=255)

                                                             gTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGGAGCGCGTCGCGCTCGCGCGCAGCTCACCTACCGGGGGGCGCGGGCGCGCCCGCCCAAGGGCCGTGGCGGGGACTCCCAGCCCTTGATcc                                                                                        >  2:6562038/1‑149 (MQ=255)

                                                               tacgCTTATCGGCGCTATCCGGTCCCGGCCCCTTCGCGGGCACGCCCGCTCCCACCGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAAc                                                                                      <  1:3195099/147‑1 (MQ=255)

                                                                acgCTGATCGGCGCTAGCCGGTACCGGCCCCGTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCGCGCGCGCAGCTCACATACCTGGGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAAcc                                                                                     <  2:8633250/148‑1 (MQ=255)

                                                                    tGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCGCGCCCGCAGCTCACATACCGGTGGGAGCGGGCGCCCCCGCGAAAGGGCCTTTGGAGGTACAACAAGCCATTGATCAACCCACg                                                                                 >  2:532870/1‑150 (MQ=38)

                                                                          gcgcTAGCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCt                                                                           <  1:6313077/150‑1 (MQ=255)

                                                                                 ccGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTc                                                                    <  2:5504257/150‑1 (MQ=255)

                                                                                       ccGGCCCCTTCGCGGGCACCCCCGCACCCACAGGTAGCGCGTCGCGCTCGCGCGCAGCTCACATACCGGTGGGAGCGGGCGCGCCCCCGCAACGGCCGTTGCACGTACAACAAGCCGTTGATAAAACCTAGCACCCACAGCCACCGCAAc                                                              >  2:4953847/1‑150 (MQ=255)

                                                                                            CCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGcccc                                                         >  2:7174055‑M1/1‑150 (MQ=255)

                                                                                               ttCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTc                                                      <  2:1040541/150‑1 (MQ=255)

                                                                                               ttCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTc                                                      <  1:3745699/150‑1 (MQ=255)

                                                                                                  gcgGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCAt                                                   >  2:2458669/1‑150 (MQ=255)

                                                                                                       cACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCa                                              <  2:4666109/150‑1 (MQ=255)

                                                                                                       cACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCCCGAAACGGCCGTTTCAGGTACAAAAAGCCGTTGATAAACCCGCGCTCCCACACCCACCGCAACCCCCCCACCAACGTCa                                              >  1:3101758/1‑150 (MQ=37)

                                                                                                            ccGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCCTc                                         >  1:7380893/1‑150 (MQ=255)

                                                                                                              gCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgcttggcca                                       <  2:8646230‑M2/150‑111 (MQ=255)

                                                                                                              gCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATccc                                       >  2:3864101/1‑150 (MQ=255)

                                                                                                               cTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgctt                                            >  2:5386430‑M2/1‑39 (MQ=255)

                                                                                                               cTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgctt                                            <  1:5386430‑M2/144‑106 (MQ=255)

                                                                                                                tCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgggcgtgcccgcgcaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgcttggccacc                                     <  2:8172005‑M2/150‑113 (MQ=255)

                                                                                                                 cccACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTc                                    >  1:5739176/1‑150 (MQ=255)

                                                                                                                  ccccaGTTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGCGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                   <  1:1066177/147‑1 (MQ=255)

                                                                                                                  ccACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgggcgcgcccgcgaaagggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgcttggccaccac                                   <  1:3738435‑M2/150‑115 (MQ=255)

                                                                                                                  ccACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACACGCCTGTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                   >  2:8453195/1‑150 (MQ=255)

                                                                                                                  ccACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTcc                                   >  2:1456001/1‑150 (MQ=255)

                                                                                                                    acaGGTAGCGCGTCGCTCTCGCGCGCAGCTCACAtacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgcc                                                                                                   >  2:2012545‑M2/1‑34 (MQ=255)

                                                                                                                    acaGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccgc                                 >  2:6131875/1‑150 (MQ=255)

                                                                                                                    acaGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGGCAGCCGCCCcgccgc                                 >  1:7933884/1‑150 (MQ=255)

                                                                                                                    acaGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCGGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTccgc                                 <  1:4934060/150‑1 (MQ=255)

                                                                                                                        gTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCGGTGGGAGCGGGCGCGCCCGCGAAAGGGCCGTTGCAGGTACTACAAGCCTTTGCTCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCGCCATCGGCAGCAGCCCCACCgccgcc                             >  2:7841506/1‑150 (MQ=255)

                                                                                                                            cgcgTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGccgccccgc                         <  2:8267293/150‑1 (MQ=255)

                                                                                                                             gcgTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCCTCCCCGCCGccgccccccc                        >  1:8290432/1‑150 (MQ=255)

                                                                                                                                  gCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCCACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCCTCCCCTCCGCCGCCCCGCCCTGcc                   >  2:883410/1‑149 (MQ=255)

                                                                                                                                   ctctCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCAt                  >  2:1221102/1‑150 (MQ=255)

                                                                                                                                    tctcGCGCGCAGCTCACAtacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgcttggccaccacgtagtgcttctgccagta                 <  2:2593705‑M2/150‑133 (MQ=255)

                                                                                                                                    tctcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCCGCATCCCCACCGCCGCCCCCCCCGGCATc                 >  1:1550132/1‑150 (MQ=255)

                                                                                                                                    tctcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATc                 >  2:6878637/1‑150 (MQ=255)

                                                                                                                                     ctcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCa                <  1:1319546/150‑1 (MQ=255)

                                                                                                                                     ctcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCa                <  1:7129157/150‑1 (MQ=255)

                                                                                                                                      tcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAAc                                                              <  1:8643457/103‑1 (MQ=255)

                                                                                                                                      tcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGcccc                                                         >  1:1837609/1‑108 (MQ=255)

                                                                                                                                      tcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGcccc                                                         <  2:1837609/108‑1 (MQ=255)

                                                                                                                                      tcGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGACTTTGATCAACCCAAGCTCCCACAGCCTCCGCAACGCCCCCACCATCGTCAGCATCACCTCCGCCCCCCCCCCCAGCaacca               >  1:7857383/1‑146 (MQ=255)

                                                                                                                                       cgcgcgCAGCTCACATACCCGTGGGAGGGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACt              <  1:7117519/150‑1 (MQ=255)

                                                                                                                                          gcgcAGCTCACAtacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgcttggccaccacgtagtgcttctgccagtaaggctt           >  1:5946168‑M2/1‑12 (MQ=255)

                                                                                                                                          gcgcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGaa           <  2:7785371/150‑1 (MQ=255)

                                                                                                                                          gcgcAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCACCATCGTCAGCATCCCCACCGCCGCCCCGCCCAGCAACACTGaa           >  1:5882361/1‑150 (MQ=255)

                                                                                                                                          ccgcAGCACACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCATTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGaa           <  2:5509092/149‑1 (MQ=255)

                                                                                                                                             cAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCACCGCCGCCCCGCCCTGCATCACTGAAgtc        >  1:9104234/1‑148 (MQ=255)

                                                                                                                                              aGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACa       <  2:5739176/150‑1 (MQ=255)

                                                                                                                                              aGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCAACGTCAGCATCCCCACCGCCGCCCCGCCCGGCATCACTGAAGGCa       >  1:5226285/1‑150 (MQ=255)

                                                                                                                                               gCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACaa      <  1:8763112/150‑1 (MQ=255)

                                                                                                                                               gCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACaa      <  2:549696/150‑1 (MQ=255)

                                                                                                                                               gCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCGGCCTCACTGTAGACaa      >  2:640369/1‑150 (MQ=255)

                                                                                                                                                cTCACAtacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgcttggccaccacgtagtgcttctgccagtaaggcttgctcaa     >  2:6676688‑M2/1‑6 (MQ=255)

                                                                                                                                                 tCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCGCCGCCGCCCCGCCCTGCATCACTGAAGACAACt    >  1:5790096/1‑150 (MQ=255)

                                                                                                                                                  cacaTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCa                                              >  1:9161136/1‑107 (MQ=255)

                                                                                                                                                  cacaTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCAGCATCACTGAAGACAAcag   >  2:3764640/1‑148 (MQ=255)

                                                                                                                                                   acatacctgtgggagcgggcgtgcccgcgaaggggccggtaccggatagcgccgatcagcttaacgcttggccagactcagctgctgctctttcggcagcacccgcttggccaccacgtagtgcttctgccagtaaggcttgctcaaggt  <  2:4087385‑M2/150‑148 (MQ=255)

                                                                                                                                                     aTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGa         >  2:7545199/1‑141 (MQ=255)

                                                                                                                                                     aTACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGa         <  1:7545199/141‑1 (MQ=255)

AAGCACTACGTGGTGGCCAAGCGGGTGCTGCCGAAAGAGCAGCAGCTGAGTCTGGCCAAGCGTTAAGCTGATCGGCGCTATCCGGTACCGGCCCCTTCGCGGGCACGCCCGCTCCCACAGGTAGCGCGTCGCTCTCGCGCGCAGCTCACATACCTGTGGGAGCGGGCGCGCCCGCGAAAGGGCCTTTGCAGGTACTACAAGCCTTTGATCAACCCTCGCTCCCTCAGCCTCCGCAACGCCCCCTCCATCGTCAGCATCCCCTCCGCCGCCCCGCCCTGCATCACTGAAGACAACTGC  >  NC_002947/5818727‑5819023

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.