Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,704,678 T→A 6.7% M1M (TTG→ATG) † PP_1499 → hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,704,6780TA 6.7% 689.1 / 33.3 259M1M (TTG→ATG) †PP_1499hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (98/129);  new base A (7/11);  total (114/145)
Fisher's exact test for biased strand distribution p-value = 8.08e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.58e-02

Only 100 of 267 total aligned reads displayed.

GCCGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGACAAC  >  NC_002947/1704529‑1704827
                                                                                                                                                      |                                                                                                                                                     
 ccGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑tt                                                                                                                                                      <  2:5061281/150‑1 (MQ=255)
  tcaaggaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTg                                                                                                                                                     >  2:8954498/4‑150 (MQ=255)
  cGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑GTg                                                                                                                                                     >  1:4604241/1‑150 (MQ=255)
    gaggaCAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGcc                                                                                                                                                   <  2:7191893/150‑1 (MQ=255)
         cAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGa                                                                                                                                              >  1:4222648/1‑150 (MQ=255)
         cAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGa                                                                                                                                              <  2:6809719/150‑1 (MQ=255)
         cAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCCTCTTCGCGGGC‑AAGCCCGCGa                                                                                                                                              <  2:6703622/150‑1 (MQ=255)
          aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGaa                                                                                                                                             <  1:1793171/150‑1 (MQ=255)
          aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑AAGCCCGCGaa                                                                                                                                             <  2:1607050/150‑1 (MQ=255)
          aaCGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCCACTTCGCGGGC‑AAGCCCGCGaa                                                                                                                                             <  2:4508690/150‑1 (MQ=255)
            cggcgacggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAaga                                                                                                                                           <  1:3127422/150‑1 (MQ=255)
                   ggcgTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGt                                                                                                                                    >  2:1142871/1‑150 (MQ=255)
                     cgTGCTGATCGACAGCCCGGGGGCGGGGGTGCTGGCCTACCGGGACGACCGGGCCAACTCCGACCTGTTCGGCGAAGTGGGGCGGTTCCAGCGCTCGGGAAATTGACGGTGTTGGGGTCTTCGCGGGC‑TTGCCGGCGAAGAGGCCGGTAc                                                                                                                                  <  2:7843002/150‑1 (MQ=255)
                           gATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGttt                                                                                                                            >  2:2468072/1‑150 (MQ=255)
                           gATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑GTGCCCGCGCAGAGGCCGGTACAGGttt                                                                                                                            >  1:7893702/1‑150 (MQ=255)
                            aTCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCGTCGCGGGC‑GTGCCCCCCAAGCGGCCGGGACCGGGTTc                                                                                                                           >  1:4025945/1‑150 (MQ=255)
                              cgcccgCCCGGCGGCGCGGGTGCGGGCCTACCGGGACGCCCCGGCCACCTCCGACCGGTTCGTCGATGGGGCGCGGTGCCAGCGCTCGGGCAAAGGACCGTGTGGGCGTCTTCGCGGGC‑TGGCCCGCGAAGAGGCCGGTACAGGTTTCgt                                                                                                                         <  2:432443/145‑1 (MQ=255)
                              cGACAGCCCGGGGGGGCGGGTGCTGGCCTACCTGGACGCCCGGGCCAACTCCCACATGTTGGTGGATGTGGCGCGGTTCCAGGGCTCGGGAAAATGACCTTGTTGGGGTCTTGGGGGGG‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCgt                                                                                                                         <  2:23238/150‑1 (MQ=255)
                              cGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCTACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCgt                                                                                                                         <  2:1084477/150‑1 (MQ=255)
                               gACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCgtg                                                                                                                        >  1:6825080/1‑150 (MQ=255)
                               gACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGGACAGGTTTCgtg                                                                                                                        >  1:2159356/1‑150 (MQ=255)
                                 cAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGACGTGGCGCGGTTCCCGCGCTCGGGCAAATGACCGTGTGGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTa                                                                                                                      <  1:6732515/150‑1 (MQ=255)
                                    cccGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTa                                                                                                                   <  1:8187508/150‑1 (MQ=255)
                                    cccAGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTa                                                                                                                   <  2:2426298/150‑1 (MQ=255)
                                        gcggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGTCCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGaaa                                                                                                               <  2:5551862/150‑1 (MQ=255)
                                        gcggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGATGTGGCGCGGTTCCAGCGCTGGGGAAATTGCCGGTGTTGGCTTCTCCGGGGGC‑TGGCCCGCTAAGAGGCCGGTACAGGTTTCGTGTACTAGaaa                                                                                                               <  1:8535850/150‑1 (MQ=255)
                                        gcggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGaaa                                                                                                               <  2:8618917/150‑1 (MQ=255)
                                        gcggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGGTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGaaa                                                                                                               <  2:4789063/150‑1 (MQ=255)
                                          ggcgCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGTGGCCGGTACAGGTTTCGTGTACTAGAAAgg                                                                                                             >  1:3723845/1‑150 (MQ=255)
                                           gcgcGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAATTGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGa                                                                                                            <  1:3592619/150‑1 (MQ=255)
                                             gcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGt                                                                                                          >  2:5899209/1‑150 (MQ=255)
                                             gcgGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACACGTTTCGTGTACTAGAAAGGAGt                                                                                                          >  1:5754853/1‑150 (MQ=255)
                                               gggTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTc                                                                                                        >  1:4496508/1‑150 (MQ=255)
                                                ggTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTcc                                                                                                       <  2:3716002/150‑1 (MQ=255)
                                                    cTGGCCTACCGGGCCGCCCCGGCCAACTCCGCCCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACGGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGt                                                                                                   <  1:5176309/150‑1 (MQ=39)
                                                     tGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTg                                                                                                  <  2:6410446/150‑1 (MQ=255)
                                                      ggCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTgg                                                                                                 >  2:22786/1‑150 (MQ=255)
                                                       gCCTCCCTGGACGCCCCGGCAAACCCCGACGTGTTCGTCGATGTGGCGGGTTTCCCGCGCTGGGGAAATTGACGGTGTTGGCGTCTTCGGGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGa                                                                                                <  1:2393959/150‑1 (MQ=255)
                                                          caCCTGGACGACCCGGCCACCGCCGCCCTGTTCGTCGAAGGGGGGCGGTCCCCGCGCTCGGGAAATTGACCGTGTGGGCTTCTTCGGGGGC‑TGGCCCGCCAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGa                                                                                             <  1:7839719/149‑1 (MQ=255)
                                                             cTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAACGGAGTTCCCGGTGGACGAATa                                                                                          >  2:6105513/1‑150 (MQ=255)
                                                             cTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑GTGCCCGCGAAGCGGCCGGGACAGGTTTCGTGGCCTCGACAGGCGTGCCCGGGGGACGAATa                                                                                          >  1:8783345/1‑150 (MQ=255)
                                                              tGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATAc                                                                                         >  2:8029935/1‑150 (MQ=255)
                                                              tGGACGACCCGGACAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCCGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATAc                                                                                         >  2:155688/1‑150 (MQ=255)
                                                                gacgccCCGCCCAACTCCGACCTGTTCGTCGAAGGGGCGCGGTTCCCGCGCTCGGGCAATTGACGGTTTTGGGTTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCa                                                                                       <  1:811720/150‑1 (MQ=255)
                                                                 acgacCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAg                                                                                      <  2:2835383/150‑1 (MQ=255)
                                                                      ccGGCAAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGAAAATGACGGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAAc                                                                                 <  1:3222535/150‑1 (MQ=255)
                                                                        ggCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCa                                                                               >  2:3119286/1‑150 (MQ=255)
                                                                         gCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTTCAGGTTTAGTGTTCTAGAAAGGAGTTCCCGGTGGACGAATAACAGCAAACCaa                                                                              >  1:1224038/1‑149 (MQ=255)
                                                                         gCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCAt                                                                              <  1:5898790/150‑1 (MQ=255)
                                                                               tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGGGGACGAATACCAGCAAACCATCCgcgc                                                                        >  1:639405/1‑150 (MQ=255)
                                                                               tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTAGTGTACTAGAAAGGAGTTCACGGTGGACGAATACCAGCAAACCATACgcgc                                                                        >  1:638830/1‑150 (MQ=255)
                                                                               tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑GTGCCCGCGAAGAGGCCCGGACAGGTTTGGGGTAAAAGAAACGAGTTACCGGTGGGAGAAAAACAACAAAACaaaccccc                                                                        >  1:387158/1‑143 (MQ=255)
                                                                               tCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑ATGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCAACCgcgc                                                                        >  2:4124796/1‑150 (MQ=255)
                                                                                    ccTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGt                                                                   >  2:6737208/1‑150 (MQ=255)
                                                                                     cTGTTCGTCTAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCTTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTc                                                                  <  1:3662220/150‑1 (MQ=255)
                                                                                        ttCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGCTTTGCCCCCG‑AGAGGCCGGGACAGGTTTCGTGTACAAGAAAGGAGTTGCCGGGGGACGGATACCCGCCAACCAACCGCGCCCGGTcccc                                                               >  1:7666165/1‑148 (MQ=255)
                                                                                        ttCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGa                                                               <  2:7558738/150‑1 (MQ=255)
                                                                                        ttCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCAGTCCGa                                                               >  2:4869830/1‑150 (MQ=255)
                                                                                           gtcgAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCg                                                            >  2:5297634/1‑150 (MQ=255)
                                                                                              gAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCAt                                                         >  2:393905/1‑150 (MQ=255)
                                                                                                    gcgcGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTcgc                                                   <  1:7721847/150‑1 (MQ=255)
                                                                                                     cgcgGTTCCAGCGCTCGGGCAACTGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTcgcg                                                  <  2:1578944/150‑1 (MQ=255)
                                                                                                      gcgGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACACGTTTCGTGTACTAGAAAGGAGTCCCCGGTGGACGAATAACAGCAAACCAAACGCGCCCAGTCCGACCGCATCGTCGCgg                                                 >  2:2627800/1‑150 (MQ=255)
                                                                                                      gcgGTTCCAGCGCCCGGGCAACGGCCCGGTTGGGCGTCTCCGCGGGC‑TGGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCgg                                                 <  1:4378464/150‑1 (MQ=255)
                                                                                                         gTTCCCGCGCTCGGGCAAATGCCGGTGTTGGGGTCTTGGCGGGC‑TGGCCCGCTACGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGcac                                              <  1:1902967/150‑1 (MQ=255)
                                                                                                         gTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGcac                                              <  1:2468072/150‑1 (MQ=255)
                                                                                                         gTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCCCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCGGTCCGACCGCATCGTCGCGGcac                                              >  2:1883321/1‑150 (MQ=255)
                                                                                                           tCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAg                                            >  2:2211895/1‑150 (MQ=255)
                                                                                                            ccAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCCCGGGC‑TTGCCCGCGCAGAGGCCGGAACAGGGTTCGTGTACTAGAAAGGACTTCCCGGTGGACGAATACCAGCAAACCAACCGCGCCCTGTCCCACCGCATCGTCGCGGCACAGa                                           >  2:6275220/1‑150 (MQ=255)
                                                                                                                   tCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCCTCGTCGCGGCACAGACGCCGAt                                    >  2:7530808/1‑150 (MQ=255)
                                                                                                                     gggCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACAAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATcc                                  <  2:3437233/150‑1 (MQ=255)
                                                                                                                       gCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCgg                                <  2:7889500/150‑1 (MQ=255)
                                                                                                                       gCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCgg                                <  2:3361210/150‑1 (MQ=255)
                                                                                                                         aaaTGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGCAGAGGCCGGTACAGGTTTCGTGGTCTAGAAAGGAGTTCCCGGTGGCCGAATACCAGCAAACCATCCGCGCCCAGTCCGCCCGCATCGTCGCGGCACAGACGCCGATCCGGGt                              >  1:2821734/1‑150 (MQ=255)
                                                                                                                              aCCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTg                         <  2:337877/150‑1 (MQ=255)
                                                                                                                               ccGTGTTGGCGTCTTCGCGGGC‑TGGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGa                        <  1:8954498/150‑1 (MQ=255)
                                                                                                                                  ggtTGGCGTCTTCGCGGGC‑GTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGAcgc                     <  1:7971388/149‑1 (MQ=255)
                                                                                                                                   gtTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGAcgcg                    <  1:6563937/150‑1 (MQ=255)
                                                                                                                                    tgggCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAACGGAGTTCCCGGTGGACGAATACCAGCCAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCgg                   <  2:6206983/148‑1 (MQ=255)
                                                                                                                                     tGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGt                  <  1:8280368/150‑1 (MQ=255)
                                                                                                                                      ggCCTCTTCGCGGGC‑AAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCGTGACGCGGTg                 >  2:1785507/1‑150 (MQ=255)
                                                                                                                                         gTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAg              >  2:2053272/1‑150 (MQ=255)
                                                                                                                                          tCTTCGCGGGC‑AAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGt             >  1:6823056/1‑150 (MQ=255)
                                                                                                                                           cggcgcgGGC‑TGGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCCTCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTg            <  2:1232208/147‑1 (MQ=255)
                                                                                                                                           cTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTg            <  1:4990192/150‑1 (MQ=255)
                                                                                                                                            ttCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           >  1:6807587/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           >  2:8211166/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGC‑GTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGCCGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           <  2:5333751/150‑1 (MQ=255)
                                                                                                                                            ttCGCGGGC‑AAGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           >  1:6658808/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGC‑AAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           >  2:7150962/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGC‑AAGCCCGCGAAGACGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           >  1:1380390/1‑150 (MQ=255)
                                                                                                                                             tCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTggg          >  1:7217405/1‑150 (MQ=255)
                                                                                                                                              cgcgGGC‑TTGCCCGCTAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGga         <  1:183226/150‑1 (MQ=255)
                                                                                                                                               gcgGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATcc                                  >  1:8387951/1‑124 (MQ=255)
                                                                                                                                               gcgGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATcc                                  <  2:8387951/124‑1 (MQ=255)
                                                                                                                                               gcgGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTgg           <  2:5046912/147‑1 (MQ=255)
                                                                                                                                                  ggC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGgacgac     >  1:6103278/1‑150 (MQ=255)
                                                                                                                                                    c‑TTGCCCGCTAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGacaa   <  1:5467747/150‑1 (MQ=255)
                                                                                                                                                    c‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGacaa   <  2:6312983/150‑1 (MQ=255)
                                                                                                                                                      ttGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGacaac  >  1:3346187/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GCCGGAGGACAACGGCGACGGCGTGCTGATCGACAGCCCGGCGGCGCGGGTGCTGGCCTACCTGGACGACCCGGCCAACTCCGACCTGTTCGTCGAAGTGGCGCGGTTCCAGCGCTCGGGCAAATGACCGTGTTGGCGTCTTCGCGGGC‑TTGCCCGCGAAGAGGCCGGTACAGGTTTCGTGTACTAGAAAGGAGTTCCCGGTGGACGAATACCAGCAAACCATCCGCGCCCTGTCCGACCGCATCGTCGCGGCACAGACGCCGATCCGGGTCCTTGACGCGGTGAAGTGGGACGACAAC  >  NC_002947/1704529‑1704827

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑