Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,921,591 T→A 19.2% intergenic (+24/+37) PP_1720 → / ← PP_1721 alcohol dehydrogenase/phosphoserine phosphatase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,921,5910TA19.2% 428.1 / 95.5 196intergenic (+24/+37)PP_1720/PP_1721alcohol dehydrogenase/phosphoserine phosphatase
Reads supporting (aligned to +/- strand):  ref base T (96/60);  new base A (15/22);  total (113/83)
Fisher's exact test for biased strand distribution p-value = 2.62e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.73e-01

Only 100 of 203 total aligned reads displayed.

GGGCGGTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCAAGTCATTCC  >  NC_002947/1921442‑1921740
                                                                                                                                                     |                                                                                                                                                      
gggCGGTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGtt                                                                                                                                                        <  1:5137542/150‑1 (MQ=255)
gggCGGTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGtt                                                                                                                                                        <  2:6605553/150‑1 (MQ=255)
  gCGGTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTa                                                                                                                                                      <  2:1005311/150‑1 (MQ=255)
     gTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTAccc                                                                                                                                                  <  1:2863100/150‑1 (MQ=255)
     gTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTAccc                                                                                                                                                  <  2:2685607/150‑1 (MQ=255)
     gTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAAccc                                                                                                                                                  <  1:6955839/150‑1 (MQ=255)
        gTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCcgcg                                                                                                                                               >  2:7471376/1‑150 (MQ=255)
        gTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAACCcgcg                                                                                                                                               <  2:7852556/150‑1 (MQ=255)
         tCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGa                                                                                                                                              <  2:5811064/150‑1 (MQ=255)
          cgccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGaa                                                                                                                                             <  2:8717878/150‑1 (MQ=255)
          cgccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGaa                                                                                                                                             <  2:704830/150‑1 (MQ=255)
          cgccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAACCCGCGaa                                                                                                                                             <  2:667388/150‑1 (MQ=255)
          cgccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCCGGCCCCTTCGCGGGTAAACCCGCGaa                                                                                                                                             <  1:6793095/150‑1 (MQ=255)
           gccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAg                                                                                                                                            >  2:315242/1‑150 (MQ=255)
           gccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAACCCGCGAAg                                                                                                                                            <  2:6331853/150‑1 (MQ=255)
           gccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGGTTACCCGCGAAg                                                                                                                                            >  1:1010448/1‑150 (MQ=255)
            ccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAACCCGCGAAgg                                                                                                                                           <  2:5635753/150‑1 (MQ=255)
            ccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAACCCGCGAAgg                                                                                                                                           <  1:6066610/150‑1 (MQ=255)
            ccgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCCGGCCCCTTCGCGGGTAAACCCGCGAAgg                                                                                                                                           <  2:2365259/150‑1 (MQ=255)
             cgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAACCCGCGAAggg                                                                                                                                          <  1:4213506/150‑1 (MQ=255)
             cgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTAAACCCGCGAAggg                                                                                                                                          <  1:4269273/150‑1 (MQ=255)
             cgcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCCGGCCCCTTCGCGGGTAAACCCGCGAAggg                                                                                                                                          <  1:2723451/150‑1 (MQ=255)
              gcAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAgggg                                                                                                                                         >  2:8801736/1‑150 (MQ=255)
                 gCTGGTCGACACCTATCCGGGGGAGTTTGCCCAGGGGGCGTATGCCGTGCTGGAGACCAACCAGGTGTCGGGCACGCTGGTGATGGTGTTCGACCCTAGCCTTGTTTATGCGGGGGTGGCCCCTTCGCGGGTTTACCCGCTAAGGGGCCg                                                                                                                                      <  2:7168264/150‑1 (MQ=255)
                        gACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGc                                                                                                                               >  1:1195749/1‑150 (MQ=255)
                            ccTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCAt                                                                                                                           >  1:8713763/1‑150 (MQ=255)
                             cTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATa                                                                                                                          >  2:8183427/1‑150 (MQ=255)
                             cTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATa                                                                                                                          >  2:708040/1‑150 (MQ=255)
                              tATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATaa                                                                                                                         >  1:3633977/1‑150 (MQ=255)
                              tATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATaa                                                                                                                         >  2:4005124/1‑150 (MQ=255)
                              tATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATaa                                                                                                                         >  1:709040/1‑150 (MQ=255)
                               aTCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTAc                                                                                                                                                    <  2:6141839/122‑1 (MQ=255)
                                tCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATaaaa                                                                                                                       >  1:5831165/1‑150 (MQ=255)
                                   ggtgttgTTTGCCCTGGGGGCTTTTGCGTAGGTGTAGACCAACCTGGTGTCGGGCATGCTGGTTTTGTTGATCGACCCTAGCCTGGTTTACGGGGGGCTGGCCCCTTGGGGGGTTTACCCGCTAAGGGGCCGGCACAGCCCATAAAAAcc                                                                                                                    <  1:6683247/144‑1 (MQ=255)
                                      ggttttggCCCTGGCGGCGTATGCCGAGCTGGAGACCACCCTGGTGCCGGGCACGCTGGTGTTGGTGATCGACCCTCGCGTGTTGTACGCGGGGCTGGCCCCTTCGGGGTTTTCCCCGCCACGGGGCCGGCACAGCCCATAAAAACCTTc                                                                                                                 <  1:2212778/143‑1 (MQ=255)
                                      ggtgTTTGCCCTGGGGGCGTTTGCCGAGCGGTAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGGGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTc                                                                                                                 <  1:8255828/147‑1 (MQ=255)
                                          tttGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTcagct                                                                                                             >  2:2977064/1‑150 (MQ=255)
                                               ccAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGaa                                                                                                                                             <  2:4036300/113‑1 (MQ=255)
                                               ccAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTcagctccagc                                                                                                        >  2:8737155/1‑150 (MQ=255)
                                               ccAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTAACCGCGaa                                                                                                                                             >  1:4036300/1‑113 (MQ=255)
                                                 aGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGGTTACCCGCGAAGGGGCCGGCCCAGCCCCTAAAAACCTTcagctccagctc                                                                                                      >  2:8504254/1‑150 (MQ=255)
                                                    cggcgTTTGCCGCGGTGGAGACCAACCTGGGGTCGGGCACGCTGGTGAGGTTGAGCGACCCTCGCGTGGTGTACGCGGGGCTGGCCCCTTCGGGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCaga                                                                                                   <  2:3960045/150‑1 (MQ=255)
                                                          aTGCCGAGCTGGAGACCAACCTGGTGTCGGGAATGGTGGTTATGGTTATCGACCCTAGCGTGGTGTAAGCGGGGCTGGCCCCTTGGGGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGc                                                                                             <  2:6392606/150‑1 (MQ=255)
                                                           tGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGcc                                                                                            >  2:428322/1‑150 (MQ=255)
                                                              cGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCCGCTCCAGCTCAGAGTCGGCCAcc                                                                                         >  2:544414/1‑150 (MQ=255)
                                                              cGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCATCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCATCAGCGCCAGCGCAGAGTCGGCCAcc                                                                                         >  1:6164452/1‑150 (MQ=255)
                                                               gAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCATCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCAAAAAAAAAATCAACTCCAGCACAGAGTAGGcccccc                                                                                        >  1:3351222/1‑150 (MQ=255)
                                                                    ggAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGa                                                                                   >  2:4366124/1‑150 (MQ=255)
                                                                     gagaCCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCgg                                                                                              <  2:2754720/138‑1 (MQ=255)
                                                                       gaCCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGAtct                                                                                >  2:7321189/1‑150 (MQ=255)
                                                                         ccaacccGGTGTGGGGCACGCGGGTGATGGTGATCGACCCTAGCCTGGTGCACGCGGGGCGGGCCCCTTCGCGGGTTTACCCGCGACGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCg                                                                              <  1:3753533/150‑1 (MQ=255)
                                                                          caaccaGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCGTCAGCTCCAGCTCAGAGTCGGCCCCCCAGAGATCTCgg                                                                             >  1:5362865/1‑150 (MQ=255)
                                                                           aaccaGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGc                                                                            >  2:6882318/1‑150 (MQ=255)
                                                                            accaGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCCTAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCAATGATCTCGGCa                                                                           >  1:3909739/1‑150 (MQ=255)
                                                                                   gtCGGGCACGCTGGTGATGGTGATCGACCCTAGCCTGGTGTACGGGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTcgc                                                                    <  2:1202745/150‑1 (MQ=255)
                                                                                       ggCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCaa                                                                >  2:866068/1‑150 (MQ=255)
                                                                                        gCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAac                                                               >  2:3366750/1‑150 (MQ=255)
                                                                                        gCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCGCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAac                                                               >  1:4616168/1‑150 (MQ=255)
                                                                                             cTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGc                                                          >  2:3908858/1‑150 (MQ=255)
                                                                                             cTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGc                                                          >  1:7321530/1‑150 (MQ=255)
                                                                                                gtgatggtgatCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAATCCTTGAGCTCCAGGTCAGAGTCGGGCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTc                                                       >  2:7771686/1‑150 (MQ=255)
                                                                                                   atggtgatCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCACAGAGTCGGCCACCCAATTATCTCGGCATGCTCGCGCAACACTGCGtaccg                                                    >  1:9111268/1‑146 (MQ=255)
                                                                                                       tgttCGCCCCTAGCGTGGTTTACGGGGGGCGGGCCCCTTCGGGGGTTCACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTc                                                <  1:3466411/147‑1 (MQ=255)
                                                                                                        gatCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTca                                               >  1:2959556/1‑150 (MQ=255)
                                                                                                        gatCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCATCAGCTCCAGCGCAGAGTCGGCCACCCCATGATCTCGGCAAGCACGCGCAACACCGCGTCCGGGTTca                                               >  1:6559400/1‑150 (MQ=255)
                                                                                                        gatCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTAACCGCGAAGGGGCCGGGACAGCCCATAAAAAACTTGAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTca                                               >  1:1297504/1‑150 (MQ=255)
                                                                                                        gatCGACCCTAGCCTGGTGTAAGCGGGGCTGACCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTca                                               >  1:2784430/1‑150 (MQ=255)
                                                                                                         atCGACCCTAGCGTGGTGTACGGGGGGGGGCCCCGTGGGGGGGTTACCCCGCGACGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTcac                                              <  1:6466926/150‑1 (MQ=255)
                                                                                                         atCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCGTCGCGGGTTTACCCGCGAAGGGGCCGGCACACCCCAGAAAAACCGTCAGCTCCCGCTCAGAGTCGGCCACCCAAAGATCTCCGCATTCTCGCGCAACACAGCGTCCGGGTTcac                                              >  1:7801614/1‑150 (MQ=255)
                                                                                                         atCGACCCTAGCCTGGGGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTcac                                              <  2:8779558/150‑1 (MQ=255)
                                                                                                              cccTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCAAAAAAACCATCAGCGCCAGCTCCGAGTCGGCCACCCATTGATCTCGGCAAGCTCGCGCAACACGGCGTCCGGGGTCACCACAt                                         >  1:1973749/1‑150 (MQ=255)
                                                                                                               ccTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATg                                        >  1:7397828/1‑150 (MQ=255)
                                                                                                                      tGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGa                                 <  2:5552808/150‑1 (MQ=255)
                                                                                                                        gtgtAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATc                               <  2:6816178/150‑1 (MQ=255)
                                                                                                                             aGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCActc                          <  2:4964381/150‑1 (MQ=255)
                                                                                                                                  gggtGGCCCCTTGGGGTTTTTACCCGCTACGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTcaac                     <  1:2433757/147‑1 (MQ=255)
                                                                                                                                  ggCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTcaac                     <  2:6909970/150‑1 (MQ=255)
                                                                                                                                       gCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCtt                                                                                                                  >  1:5007834/1‑52 (MQ=255)
                                                                                                                                       gCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCtt                                                                                                                  <  2:5007834/52‑1 (MQ=255)
                                                                                                                                         cccTTCGCGGGTAAACCCGCGAAGGGGCCAGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACg              >  2:5840534/1‑150 (MQ=255)
                                                                                                                                          ccTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACgg             >  2:517485/1‑150 (MQ=255)
                                                                                                                                          ccTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACgg             >  1:6301924/1‑150 (MQ=255)
                                                                                                                                          ccTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACgg             >  1:2938265/1‑150 (MQ=255)
                                                                                                                                          ccTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACgg             <  2:1307023/150‑1 (MQ=255)
                                                                                                                                           cTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGc            >  2:2070320/1‑150 (MQ=255)
                                                                                                                                           cTTCGCGGGTAAACCCGCGAAGGGGCCAGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGc            >  1:8092398/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCa           >  2:2161086/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCa           >  2:2538782/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCa           >  1:8856215/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGTAAACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCa           >  1:3276317/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGTAAACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCa           >  1:7892331/1‑150 (MQ=255)
                                                                                                                                            ttCGCGGGTAAACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCa           >  2:7906205/1‑150 (MQ=255)
                                                                                                                                             tCGCGGGTTTACCCGCTAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCTCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACCGCaa          <  2:5923078/150‑1 (MQ=255)
                                                                                                                                              cgcgGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCAAg         <  2:3708882/150‑1 (MQ=255)
                                                                                                                                              cgcgGGTAAACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCa                                                                                                     >  1:5235147/1‑58 (MQ=37)
                                                                                                                                              cgcgGGTAAACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCa                                                                                                     <  2:5235147/58‑1 (MQ=37)
                                                                                                                                               gcgGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGACATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCAAGt        >  1:1573459/1‑150 (MQ=255)
                                                                                                                                               gcgGGTAAACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCAAGt        >  2:1711209/1‑150 (MQ=255)
                                                                                                                                                    tttACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCAAGTCATTc   <  2:1195749/150‑1 (MQ=255)
                                                                                                                                                     ttACCCGCGATGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCAAGTCATTcc  <  1:8802017/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GGGCGGTTGTCGCCGCAGCTGGTCGACACCTATCCGGTGGAGTTTGCCCAGGCGGCGTATGCCGAGCTGGAGACCAACCAGGTGTCGGGCAAGCTGGTGATGGTGATCGACCCTAGCCTGGTGTAAGCGGGGCTGGCCCCTTCGCGGGTTTACCCGCGAAGGGGCCGGCACAGCCCATAAAAACCTTCAGCTCCAGCTCAGAGTCGGCCACCCATTGATCTCGGCATGCTCGCGCAACACTGCGTCCGGGTTCACCACATGCGGGTGATCCACTCTCAACAACAACGGCAAGTCATTCC  >  NC_002947/1921442‑1921740

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: