| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 1,947,850 | G→C | 9.7% | intergenic (‑68/+102) | PP_1748 ← / ← PP_1749 | hypothetical protein/acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 1,947,850 | 0 | G | C | 9.7% | 428.4 / 4.7 | 153 | intergenic (‑68/+102) | PP_1748/PP_1749 | hypothetical protein/acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base G (65/70); new base C (13/5); total (78/75) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.79e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 153 total aligned reads displayed.
GGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGC > NC_002947/1947705‑1947997 | ggggCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGACAGGGCCGCaaa < 2:8850570/150‑1 (MQ=255)ggggCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCaaa < 1:3703664/150‑1 (MQ=255) ggCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGc < 1:1348606/150‑1 (MQ=255) ggCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGc < 1:1957528/150‑1 (MQ=255) tGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGc < 1:8082229/150‑1 (MQ=255) gggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCTGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGccc > 1:717374/1‑150 (MQ=255) gggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGccc < 2:4452326/150‑1 (MQ=255) gggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGccc < 2:3773112/150‑1 (MQ=255) ggATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGcccc < 2:6290783/150‑1 (MQ=255) aTGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCgg < 1:2089623/150‑1 (MQ=255) aTGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCgg < 2:3113507/150‑1 (MQ=255) aTGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCgg < 2:3579320/150‑1 (MQ=255) gAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAg > 1:6857558/1‑136 (MQ=255) aTTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAATGGCCGCAAAGCGGCCCCGGCAATATCgg > 1:7625424/1‑150 (MQ=255) gcagcaCGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGaa < 1:3781441/150‑1 (MQ=255) tttGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCTGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGAccc < 2:717374/150‑1 (MQ=255) tgcgaTCGTCGAGTGGGGGTTCGGGGAGTGGTTCGGACTTGTCCAGGCCGCGGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCTAAAGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTa < 2:3033516/147‑1 (MQ=37) gagaTCGTCGAGATCGGGTTCGGGGTGTCGTTCGCAGATGTCCAGGCCTCGGGTCGGGTTAAAATTTTGCA‑GTGTTGTGGGAGCGGCCTTGTGT‑CGCGAACGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAg < 2:4695278/150‑1 (MQ=38) tCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCGTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAAAATAGGCAGCGAAGCTGAGACCCAAGGGgcgcg > 2:7540123/1‑149 (MQ=255) cGAGATCGGGTTGGGGGTGTCGTTCGGACATGTCCAGGCCTCCGGTCGGTTTAAAATTTTGCC‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCtt < 2:261506/150‑1 (MQ=38) cGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTGGCA‑GGCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCtt < 2:6521327/150‑1 (MQ=255) gcgtgggggTTGGGGGTGTCTTTCGGACATGTCCTGGCCGCCGGTGGGTTTAAATTTTTGCT‑GTTTGGTGGGCGGGGCGTGGTGG‑CGCTACCGGCCCCCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:2279364/144‑1 (MQ=255) gagtgggggTTCGGGGCGTCGTTCGTACATGTCCAGGCCTCGGGTCGGG‑TAAAATTTTGGACGTCTTGGGGGCGCGGCCTTGTGT‑CGCGAAAGGGCCCCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:8791587/144‑1 (MQ=37) gagaTGGGGTTGGGGGAGTGGTTCGGACTTGCCCCGGCCTCGGGTGGGTTTAAAATTTTGCA‑GTGTTGTGGGAGCGGCCTTGTGT‑CGCGAACGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:2661889/150‑1 (MQ=37) gagaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 2:8097714/150‑1 (MQ=255) gagaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 1:8317491/150‑1 (MQ=255) gagaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTc < 2:8097973/150‑1 (MQ=255) agaTCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCGAGTGT‑AGCGCAAAGGCCCCCAAACGGCCCCCGCAAAATAGGCAGAGAAACGGTGAACCAACGGgcgccgag > 2:2423305/1‑146 (MQ=255) ctCGGGTTCGGGGTGTCGTCCGGAGAGGTCCTGGCCGCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAACGGGCCGCATTGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCa < 2:1961269/149‑1 (MQ=37) accGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCC‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCa < 2:1961545/148‑1 (MQ=255) aTCGGGTTCGGGGAGTGGTTCGGACTTGTCCCGGCCTCCGGTCGGTTTAAAATTTGGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCa < 1:6596679/150‑1 (MQ=38) ggggtggggggAGCCGGCCGGACCTGTCCAGGCCTCGGGTCGGGTTAAAATTTTGCA‑GTATTGTGGGAGGGGCATGGTGT‑CGCTAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcc < 1:8120862/143‑1 (MQ=37) ggTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAATTTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCAcccc < 1:6112347/150‑1 (MQ=255) gTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCa > 2:6626439/1‑150 (MQ=255) tCGGGGTGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAACGGGCCGCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAtt < 2:3850212/150‑1 (MQ=255) gggggCGTGGTTCGGACTTGTCCTGGCCCCGGGTGGGGTTAAAATTTGGCC‑GTCTGGTGGGAGCGGCCTTGTGG‑CGCGAACGGGCCCCAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTc < 1:1687104/149‑1 (MQ=255) cGGGGAGTCGTTCGGACAGGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTc < 1:8948620/150‑1 (MQ=255) cGGGGAGTCGTTCGGACAGGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTGGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTc < 2:4795333/150‑1 (MQ=255) ggggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCGTGTGT‑CGCGCAAGGGGCGCCAAGCGGCCCCGGCCATATCGGCAGCGAAGCTGAGCCCCGAGGGGCGCGTCGCCCCCCATTcg > 2:6835506/1‑150 (MQ=255) ggggAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGAAGCGGGCCTGTTT‑GGCGCAAAGGCCCCCAACCCGCCCCCGCCAAAAAGGCAGCCCAACAGAGACCCAAAGGGGGCGGCGCAcccccatcg > 2:1586375/1‑145 (MQ=255) gggTGTCGTTCGGACATGTCCAGGCCTCCGGTGGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTcgc < 1:5206443/150‑1 (MQ=255) gAGTCTTTGGGACTTGTCCTGGCCTCCGGTCGGTTTAAAATTTTGCT‑GTGTTGTGGGAGCGGCCTTGTGT‑CGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGa < 1:5751825/150‑1 (MQ=37) gAGTCTTTCGTACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGGGGCCTTGTGT‑CGCGAATGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGa < 1:6854134/150‑1 (MQ=255) gAGTCGTTCGTACTTGTCCAGGCCTCGGGTGGGGTTAAATTTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGC‑CGCTAATGGGCCGAAACGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGa < 1:2553938/150‑1 (MQ=255) gTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCCTGTTT‑CGCGAAAGGGCCCCAAACCCGCCCCCGCCAAATAGGCCCCGAACCAGAGACCCAAAGGGCGCGTAGCACCCCCAACGCCACACaa > 2:4842886/1‑150 (MQ=255) ttCGCAAATGCCCAGCCCTCCGTTCTGTTTAAAATTTTGAA‑GTCTTGTGGCAGCGCCCTTGTGA‑CGCTAACGGCCCCAAAAGCGCCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAg < 1:2518654/150‑1 (MQ=255) tCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCGTGGGT‑CGCGCAAGGGCCCCCAACCCGCCCCCGCACTAGCGGCCCCGCAGCCGCGCCCCGAGGGGCGCCTCGCACCCCACTCGCGCCACaacg > 2:5805444/1‑148 (MQ=255) tCGGACATGCCCAGGCCTCGGGTCGGTTTAAATTTTTGCT‑GTCTTGTGGGAGCGGCGTTGTGT‑CGCTAATGGGCCGCAATGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAgg < 1:1183468/150‑1 (MQ=37) tttCCTGGCCGCGGGTGGGGTTATTATTTTGCT‑TTGTTTGGGGTGGGGCGTTGTGT‑CGCGAATGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTTGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTcc < 2:9147536/148‑1 (MQ=18) tCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCATGTGT‑CGCCAAAGGGCCCCAAAGCCGCCCCCGCAAAATACGCACCCCAGCAGAGACCCAAAGGGCGCATCCCACCCCCAAAGCCACACAAAGCcccaccca > 2:2731548/1‑150 (MQ=255) cgggTGGGGTTAAAATTTGGCT‑TTGTGGGGGTCGCGGCCTTGTGT‑CGCGAACGGGCCGAAACGGGCCCCCGGCAATATCGGCAGCGACGCTGAGACCCTAGGGGCGATTCGCACCCCATGCGCGACACACGGCCGCTCCCACAAAAAGcc < 2:7044538/148‑1 (MQ=255) gggcgttttAAATTTTTGCC‑GTCTGGTGGGAGCGGCCTTGTGT‑CGCGAACGGGCCGCAAAGGGGCCCCGGCAATATCGGCAGCGACGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGa < 2:1489096/143‑1 (MQ=25) tAAAATTTTGCC‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGt < 2:7630823/150‑1 (MQ=255) aaTTTTGCA‑GTCTTGTGGGATCGGCCGTGTGT‑GGCGCAAGGGCCCCCAAACGGCCCCCGCCAAAAAGGCACCCCCTCAGAGACCCAAGGGGCGCGTCGCACCCCCATAGCGCAACAAAGCCCCACCCACCAAAAACCCCGCAggggtccg > 2:3979826/1‑143 (MQ=255) tttttGCA‑GTCTTGTGGGTGCGGCCTTGTGT‑CGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAgg < 2:5140866/149‑1 (MQ=255) aTTTTGCA‑GTGTTGTGGGCGCGGCGTTGTGT‑CGCTAATGGGCCGCAACGGGGCCCCGGCAATATCGGCAGCGACGCTGAGACCCTTGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAgg < 2:5140748/150‑1 (MQ=25) a‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATAGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCCGTTGTCAGGCCAAcgg > 2:6794810/1‑150 (MQ=255) gTCGTGTGGTAGCGG‑CTTGTTTCCGTTAAGGGGCCGCAACGGGGCCCGTGAATTTTGGGCAGCGATGATGTTACCGTAGGGGGGCTTCGAACCACTTTCGGGACACATGGCAGCTCCCACAAAAAGCCGAGCAGTTTTCAGGCCAAcggc < 2:8872125/150‑1 (MQ=255) tgttGGGGGCGCGGCGTTGTGG‑CGCGAAGGGGCCGAAACGCGGCCCCGGAAATAGCGGCAGCGACGCTGAGACCCTCGGGGCGCTGCGCACCCCATTCGCGACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcggcc < 2:227353/148‑1 (MQ=255) ttGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAAcggccgg > 2:8225694/1‑150 (MQ=255) ttGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATAGACGCAGCGACGCTGCGACCCTAGGGGCGCGTCGCACCCCATGCGCGACACAAGGCCGCTCCCACAAATCGCCGAGCCGGTGGCCGGCCAAcggccgg > 2:8225319/1‑150 (MQ=21) ggtcgCGGCCTGGTGG‑CGCGAATGGCCCGAAAAGCGGCCCCGGCACTAGCGGCAGGGACGCTGCGCCCCTCGGGGCGCTTCGCACCCCATTCGCCAAACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTAt < 2:3391252/146‑1 (MQ=25) ggAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCTGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCAATCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATg > 2:3628188/1‑150 (MQ=255) gCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGaaa > 2:3964255/1‑150 (MQ=255) ttGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTggggctgcttcgcagccctttcgcgacacaaggccgctcccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactc < 2:9042452‑M2/150‑91 (MQ=255) ttGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTCTGGGGAAAcag > 1:5597135/1‑150 (MQ=255) ttGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcag > 2:5975459/1‑150 (MQ=255) gtgt‑CGCGAACGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagca < 2:7448955/150‑1 (MQ=255) tgt‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag > 2:3225066/1‑150 (MQ=255) tgt‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag > 2:9101084/1‑150 (MQ=255) tgt‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagcag > 2:6111002/1‑150 (MQ=255) gt‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGTGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCACCCACAAAAAGCCGAGCAGTTGTCAGGCCAACCGCCCGCTATGTGGAAACAGCAgg > 1:2547719/1‑150 (MQ=37) t‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTCTGGGGAAACAGCAGGt > 2:7757118/1‑150 (MQ=255) t‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 2:1399962/1‑150 (MQ=255) t‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:8842745/1‑150 (MQ=255) t‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGt > 1:2867630/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 2:3801060/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 1:8120616/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 2:4102669/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 2:6927887/1‑150 (MQ=255) gcgAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCg > 1:4404314/1‑150 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTggggctgcttcgcagccctttcgcgacacaaggccacacccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactccacacgctc < 1:3079883‑M2/150‑100 (MQ=255) gAAAGGGCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTggggctgcttcgcagccctttcgcgacacaaggccacacccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactccacacgctc < 1:2637399‑M2/150‑100 (MQ=255) cggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaa > 2:3562888/3‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaa > 1:7768993/2‑150 (MQ=255) ggggCCGCTTTGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCGTCGCACCCCATGCGCGACCCAAGGCCGCTCCCACAAAAAGCCGAGCAGATGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaa > 1:4517872/2‑150 (MQ=38) aGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaa > 1:5131557/1‑150 (MQ=255) aGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaa > 1:558514/1‑150 (MQ=255) gggCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaaa > 2:4935229/1‑150 (MQ=255) gggCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaaa > 2:4266613/1‑150 (MQ=255) gggCCGAAAAGCGGCCCCGGCATTTTCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaaa < 2:2890730/150‑1 (MQ=255) gggCCCCAACGGGGCCCCGGAAATATCGGCTGCTATGGTTAGACCCTCGGGGCGCTACGCACCCCTTTCGCGACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaaa < 2:217641/150‑1 (MQ=255) ggcccGAAACGCGCCCCCGTAAATAGCGGCCGCTACGCTGAGACCCTCGGGGCGGTCCGCACCCCTTCCGCCACACACGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATaaaa < 2:3082323/147‑1 (MQ=255) ggCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAAc > 1:3845182/1‑150 (MQ=255) gCCGCAAAGCGGCCCCGGCAATCTAAGTTGCGAAGCTGAAAATCTggggctgcttcgcagccctttcgcgacacaaggccgcacccacagaacgaggtctgctcatacacttttagcaggcgccacggccaactccacacgctcgctctt < 2:1511399‑M2/150‑106 (MQ=255) gCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACg > 2:4133257/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTCTGGGGAAACAGCAGGTCGATAAAACGc > 2:4878639/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAAcagca < 1:3143269/136‑1 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 1:731668/1‑150 (MQ=255) ccGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGc > 1:6359877/1‑150 (MQ=255) | GGGGCTGGGGATGGCGAGCATTTCCAGCAGCACGCGTTTGAGATAGTCGAGATCGGGTTCGGGGAGTCGTTCGGACATGTCCAGGCCTCCGGTCGGGTTAAAATTTTGCA‑GTCTTGTGGGAGCGGCCTTGTGT‑CGCGAAAGGGCCGCAAAGCGGCCCCGGCAATATCGGCAGCGAAGCTGAGACCCTAGGGGCGCTTCGCACCCCATTCGCGACACAAGGCCGCTCCCACAAAAAGCCGAGCAGTTGTCAGGCCAACGGCCGGCTATGGGGAAACAGCAGGTCGATAAAACGC > NC_002947/1947705‑1947997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |