Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 1,967,236 A→G 6.1% intergenic (+63/+56) PP_1762 → / ← yciK hypothetical protein/putative oxidoreductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029471,967,2360AG 6.1% 598.3 / 18.6 198intergenic (+63/+56)PP_1762/yciKhypothetical protein/putative oxidoreductase
Reads supporting (aligned to +/- strand):  ref base A (95/87);  new base G (4/8);  total (102/96)
Fisher's exact test for biased strand distribution p-value = 2.44e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.98e-01

Only 100 of 208 total aligned reads displayed.

GACTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTG  >  NC_002947/1967087‑1967385
                                                                                                                                                     |                                                                                                                                                      
  cTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAg                                                                                                                                                     <  2:4795075/150‑1 (MQ=255)
  cTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAg                                                                                                                                                     <  2:1431939/150‑1 (MQ=255)
    gCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGa                                                                                                                                                   <  2:1690207/150‑1 (MQ=255)
     cATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCCACCCACAAGGAt                                                                                                                                                  >  2:6726623/1‑150 (MQ=255)
        gttcctgttcctGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTgc                                                                                                                                               <  2:8021401/150‑1 (MQ=255)
          tcctgttcctgGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCGTGCCCCCACCCACACGAACACCGCAAACCACCAggcattcgc                                                                                                                                             >  2:3226542/1‑143 (MQ=255)
          tcctcttcctgGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCATCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTTGAGGGTTgcgg                                                                                                                                             <  2:6903748/150‑2 (MQ=39)
           cctgttcctgGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGcc                                                                                                                                            <  1:8684827/150‑1 (MQ=255)
           cctgttcctgGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCCCACCCACAGGATCAAACCAACCCACAAGGGTTGCGcc                                                                                                                                            >  1:7596230/1‑150 (MQ=255)
            ctgttcctgGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGccc                                                                                                                                           <  2:6735455/150‑1 (MQ=255)
               ttCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGc                                                                                                                                        >  1:5290448‑M2/1‑149 (MQ=255)
                 ccTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCTCAACCCTCAAGGATTGCGCCCTGcct                                                                                                                                      >  1:2875064‑M2/1‑147 (MQ=255)
                   tcatgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAACCCTCAAGGATTGCGCCCTGCCtgt                                                                                                                                    >  1:4448397‑M1/83‑150 (MQ=255)
                    ggAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtg                                                                                                                                   >  1:2544179‑M2/1‑144 (MQ=255)
                    ggAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtg                                                                                                                                   >  1:3437135‑M2/1‑144 (MQ=255)
                    ggAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtg                                                                                                                                   >  2:2327064‑M2/1‑144 (MQ=255)
                    ggAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtg                                                                                                                                   >  2:8325624‑M2/1‑144 (MQ=255)
                    ggAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtg                                                                                                                                   >  1:8249730‑M2/1‑144 (MQ=255)
                     gAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgg                                                                                                                                  >  1:3152804‑M2/1‑143 (MQ=255)
                     atgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccactaaaccggcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTgg                                                                                                                                  >  2:5941067‑M1/81‑150 (MQ=255)
                     atgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgtacCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTgg                                                                                                                                  >  1:3752543‑M1/81‑150 (MQ=255)
                     atgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTgg                                                                                                                                  >  2:6571513‑M1/81‑150 (MQ=255)
                     atgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTgg                                                                                                                                  >  2:2164984‑M1/81‑150 (MQ=255)
                      tgccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAACCCTCAAGGATTGCGCcct                                                                                                                                          <  2:3169828‑M1/62‑1 (MQ=255)
                       gcgcTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtggga                                                                                                                                >  2:1117537‑M2/1‑141 (MQ=255)
                       gccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgtacCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGa                                                                                                                                >  1:2063950‑M1/79‑150 (MQ=255)
                       gccggtgtacctgtacctgatggggccggacagcacaggggtgaacgggcaggcgttcaacgcccaataaacctgcatCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGa                                                                                                                                >  1:3483287‑M1/79‑150 (MQ=255)
                        cgcTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggag                                                                                                                               >  1:4268008‑M2/1‑140 (MQ=255)
                          cTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcg                                                                                                                             >  1:3411383‑M2/1‑138 (MQ=255)
                           tgcatgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgg                                                                                                                            >  1:7841625‑M2/1‑137 (MQ=255)
                           tgcatgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgg                                                                                                                            >  1:7023140‑M2/1‑137 (MQ=255)
                             catgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATcctgtgggagcgggc                                                                                                                          >  2:1782763‑M2/1‑135 (MQ=255)
                             catgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCGTGCCCGCGCCCACAGGGTCACCGCAACCCTCAAGGATTTCGCCCGGccggggggagcgggc                                                                                                                          <  1:6864759‑M2/150‑16 (MQ=255)
                               tgcaGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATcctgtgggagcgggcaa                                                                                                                        >  2:2870004‑M2/1‑133 (MQ=255)
                                gaaGCTGGAAGGGCGCCAGCAAGGACGTATGCGGCCGGCGTTGGCTGAGGGCTGATCGCTTTCATGTACCGGCCTCTTCGCGGCCTTGCCACCACCCACAGGATCACCGCAACCATCAACGCATCCGCCCAGCCGTTGGGAGCGGGCaac                                                                                                                       >  2:5237620/3‑149 (MQ=255)
                                  aGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCGTGCCCGCACCCACAGGATAACCCCAACCCGCAAGGGTTGCGCCCGGccggtgggagcgggccagcc                                                                                                                     <  1:5291607‑M2/150‑21 (MQ=255)
                                    cgggatGGGCGCCAGAAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccg                                                                                                                   >  2:247511‑M2/3‑128 (MQ=255)
                                          gggCGCCAGCTTGGCCGTTTGGGGCCGGCTTTGGCTGCGGGCTTTTCGCTTTCCTTTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACCGTATCACCGCAACCCTCAAGGTTTGCGCCCTGcctgtgggagcgggcaagcccgcgaaga                                                                                                             >  2:8102753‑M2/1‑122 (MQ=255)
                                          gggCGCCACCACGGCCGTAGGCGGCCGGCTTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTACGCGGGATTGCCCGCACCAACAGCATAACCCCAACCAAAAAGCATTGCGCCCTGCCTGTGGGAGCGGCCACGCCCGCGAaga                                                                                                             <  2:3489207/150‑1 (MQ=255)
                                                    aaGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACCGGGTCACCGCAACCCCCAAGGATTGCGCCCAGccggtgggagcgggccagcccgcggaggggcccaggcc                                                                                                   <  1:8335689‑M2/150‑39 (MQ=255)
                                                                       gTTGGCGGGGGGCTGAGCGCTTGCCGGGACCGCCCTCTCCGCGGGCTGGCCCGCTCCCCCCGGACCACCGCAACCCTCCCGGATGGCGCCCTGCCTGTGGGAGCGGGCACGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAAc                                                                                <  2:5772885/150‑1 (MQ=255)
                                                                         tGGCTGGGGGCTGATCGATTCCCTGTACCGCCCTCTTCGGGGGGTGGCCCGCTCCCACAGGAGCACCCCACCCCACAAGTTTTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGc                                                                              <  2:6503797/150‑1 (MQ=37)
                                                                            cTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCCCACCCACAGGATCACCCCAACCCACAAGGCATTAGCCCAGCCGGTGGGAGCGGGCCACCCCCCCCAGAGGCCGCTGCAGGTTTATTTGGCGTTGTAAGccag                                                                           >  2:4199858/1‑148 (MQ=255)
                                                                             tGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCGTGCCCCCGCCCCCCCGGTAACCGCAACCCCCAACGGATTCGCCCGGCCGGTGGGCGCGGGCCCGCCCCCCAAGAGGCCCCTGCCGGGTTATTGGGCGGTGTACCCCAGc                                                                          >  2:2594505/1‑150 (MQ=255)
                                                                                gggATGATCGCTTTCCTGTACCGGCCTCTTCGCGGGGGTGCCCCCGCCCCCAGGATCACCGCAACCCACCAGGGGTGCGCCCGGCCGGGGGGGGCGGGCAAGCCCCCGCAGAGGGCGCGGCCGGGGTTTTTGGGGGTGTACGCCGGCCCg                                                                       >  2:8713103/1‑150 (MQ=255)
                                                                                    tGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCGTTGCCGCACCCACAGGATGACCGCCACCCGCCAGGATTGCGCCCGGCCGGGGGGAGCGGGCCACCCCGCGGAGAGGGCGATGGAGGTTTATTTGGCGGTGGCCGCCAGccccgtca                                                                   >  2:6340015/1‑145 (MQ=255)
                                                                                       tCGCTTTCCTGTACCGGCCTCTTCGCGGGCGTGCCCCCGCCCCCAGGATCACCCCAACCCACAAGGATTGCGCCCGGCCGGTGGGGGCGGGCCAGCCCCCGAAGAGGCCCCTGCAGGTTTATTTGGCGTTGGAAGCCGGCCCGGTCAccc                                                                >  2:1268424/1‑150 (MQ=255)
                                                                                           tttCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcggg                                                                                                                           >  2:1678668‑M2/1‑73 (MQ=255)
                                                                                                     CGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTg                                                                                                                                                >  2:7238066‑M1/1‑56 (MQ=255)
                                                                                                       gcccgtgCGCGGGCTGGCCCGCCCCCACCGGATCACCGCACCCCTCACGTATTGCGCCCTGCCTGTGGGCGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGccc                                                >  2:3990114‑M1/8‑150 (MQ=255)
                                                                                                            gTCGGGGGCTGGCCCGCCCCCCCCGGACCACCCCACCCCTCACGTATGGCGCCCGGCCTGGGGGAGCGGCCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATca                                           >  2:2542503‑M1/2‑150 (MQ=255)
                                                                                                                     TTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt                                  <  1:1941533‑M1/150‑1 (MQ=255)
                                                                                                                     TTGCCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt                                  <  1:1941654‑M1/150‑1 (MQ=255)
                                                                                                                     TTGCCCGCTCCCACAGGATCGCCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATcaggtacaggt                                  <  1:5002554‑M1/150‑1 (MQ=255)
                                                                                                                     TTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGa                                                                                  >  1:7058872‑M1/1‑102 (MQ=255)
                                                                                                                        CCCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAggtacaggtaca                               <  2:4517057‑M1/150‑1 (MQ=255)
                                                                                                                        CCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTc                                                      <  1:1787865‑M1/127‑1 (MQ=255)
                                                                                                                         CCGCTCCCACAGGCAGGGCGCAATCCTTGAGGGTTGCGGTGATCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTacac                              <  2:6670048‑M1/150‑1 (MQ=255)
                                                                                                                         CCGCTCCCACAGGATCACCGCACCCCTCAAGGATTGCGCCCTGCCTGGGGGAGCGGGCCAGCCCGCGAAGAGGCCGATGCAGGGGTAGTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCGGTCCGGCCCCATCAGGTACAGGTacac                              <  2:8694084‑M1/150‑1 (MQ=255)
                                                                                                                         CCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCTGGCCCCATCAGGTACAGGTacac                              <  2:8416820‑M1/150‑1 (MQ=255)
                                                                                                                         CCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTacac                              <  1:3261823‑M1/150‑1 (MQ=255)
                                                                                                                           gCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagc                            <  1:7941354‑M2/150‑110 (MQ=255)
                                                                                                                           GCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCg                            <  2:7012516‑M1/150‑1 (MQ=255)
                                                                                                                           GCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCg                            <  1:226227‑M1/150‑1 (MQ=255)
                                                                                                                             tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGgctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgc                          <  2:7832703‑M2/150‑112 (MQ=255)
                                                                                                                             tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccgatgcaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgc                          <  1:6294125‑M2/150‑112 (MQ=255)
                                                                                                                             tCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccgatgcaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgc                          <  1:3189828‑M2/150‑112 (MQ=255)
                                                                                                                               ccACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccgatgcaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgctc                        <  2:1021760‑M2/150‑114 (MQ=255)
                                                                                                                               CCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCAt                        <  2:1451250‑M1/150‑1 (MQ=255)
                                                                                                                               CCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCAt                        <  2:218107‑M1/150‑1 (MQ=255)
                                                                                                                               CCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCAt                        <  1:946367‑M1/150‑1 (MQ=255)
                                                                                                                                cacaGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgctcc                       <  1:8943197‑M2/150‑115 (MQ=255)
                                                                                                                                CACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATg                       <  2:7385746‑M1/150‑1 (MQ=255)
                                                                                                                                CACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATg                       <  1:701785‑M1/150‑1 (MQ=255)
                                                                                                                                 acaGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgctcca                      <  1:4510545‑M2/150‑116 (MQ=255)
                                                                                                                                 acaGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatc                                                                                        >  2:4219223‑M2/1‑35 (MQ=255)
                                                                                                                                 acaGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatc                                                                                        <  1:4219084‑M2/84‑50 (MQ=255)
                                                                                                                                 ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa                      <  1:1823963‑M1/150‑1 (MQ=255)
                                                                                                                                 ACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGa                      <  1:7348110‑M1/150‑1 (MQ=255)
                                                                                                                                  CAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGAt                     >  2:6907829‑M1/1‑150 (MQ=255)
                                                                                                                                   aGGATCACCGCAACCCTCAAGGATTGCGCCCTGcctgtgggagcgggcaagcccgcgaagaggccggtacaggaaagcgatcagcccgcagccaacgccggccgcatacggccttgctggcgcccttccagctgcatgcagcgctccagg                    <  2:6190840‑M2/150‑118 (MQ=255)
                                                                                                                                       tCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCtt                >  2:7593653/1‑150 (MQ=255)
                                                                                                                                        cACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTc               <  2:7348110/150‑1 (MQ=255)
                                                                                                                                         aCCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCg              <  2:5291594/150‑1 (MQ=255)
                                                                                                                                                 ccTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTCTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCgg      >  1:5863120/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  1:2821058/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  1:3537143/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  2:5426894/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  1:4639066/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  2:5161719/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  2:5112540/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  2:4593095/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  2:3747898/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  2:7866518/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  1:5584204/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  2:2461720/1‑150 (MQ=255)
                                                                                                                                                   tCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgt    >  1:1152480/1‑150 (MQ=255)
                                                                                                                                                     aaGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgttg  >  1:5524436/1‑150 (MQ=255)
                                                                                                                                                     aaGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgttg  >  1:6138939/1‑150 (MQ=255)
                                                                                                                                                     aaGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGgttg  >  1:1542978/1‑150 (MQ=255)
                                                                                                                                                     |                                                                                                                                                      
GACTGCATGTTCCTGTTCCTGGAGCGCTGCATGCAGCTGGAAGGGCGCCAGCAAGGCCGTATGCGGCCGGCGTTGGCTGCGGGCTGATCGCTTTCCTGTACCGGCCTCTTCGCGGGCTTGCCCGCTCCCACAGGATCACCGCAACCCTCAAGGATTGCGCCCTGCCTGTGGGAGCGGGCAAGCCCGCGAAGAGGCCGATGCAGGTTTATTGGGCGTTGAACGCCTGCCCGTTCACCCCTGTGCTGTCCGGCCCCATCAGGTACAGGTACACCGGCATGATCTCTTCGGGCAGCGGGTTG  >  NC_002947/1967087‑1967385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: