| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,052,548 | A→G | 5.4% | intergenic (‑76/+99) | PP_1824 ← / ← PP_1825 | Smr domain‑containing protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,052,548 | 0 | A | G | 5.4% | 655.5 / 3.2 | 218 | intergenic (‑76/+99) | PP_1824/PP_1825 | Smr domain‑containing protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (82/112); new base G (10/2); total (100/118) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.65e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 222 total aligned reads displayed.
CGGCACGGTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGC > NC_002947/2052400‑2052696 | cGGCACGGTCGGGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAA < 2:2023027‑M1/150‑1 (MQ=255) gcttgttgctgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAAc > 2:572998‑M1/124‑150 (MQ=255) gCACGGTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACC > 2:152050‑M1/1‑150 (MQ=255) cttgttgctgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAAcc < 2:8873193‑M1/28‑1 (MQ=255) ttgttgctgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGgtgaaacc < 1:6813585‑M1/29‑4 (MQ=255) gttgctgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑Gc > 1:1092015‑M1/120‑150 (MQ=255) cGGTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GC < 2:8303872‑M1/150‑1 (MQ=255) cGGTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GC < 2:40743‑M1/150‑1 (MQ=255) ggTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCT > 1:6082052‑M1/1‑150 (MQ=255) tgctgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTc > 1:1521619‑M1/118‑150 (MQ=255) gTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTC < 1:123974‑M1/150‑1 (MQ=255) gTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTC < 1:3250219‑M1/150‑1 (MQ=255) gTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTC < 1:7869924‑M1/150‑1 (MQ=255) gTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTC < 1:4689107‑M1/150‑1 (MQ=255) ctgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCt < 2:289121‑M1/35‑1 (MQ=255) atgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCt < 1:3950591‑M1/35‑1 (MQ=255) tgctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgcctcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTTCaccc‑gcgaaga > 1:3577374‑M1/115‑145 (MQ=255) gTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTA < 1:6294289‑M1/150‑1 (MQ=255) gTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGGCTTGCTTGAGGCCTCCACGTCGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTA < 1:8643222‑M1/150‑1 (MQ=255) gctgtggctgggcgtgcgtttctggcggcgcagccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTAc > 1:1525708‑M1/114‑150 (MQ=255) gCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACgg < 1:6164706/150‑1 (MQ=255) cGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGTTGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACggg < 2:6210821/150‑1 (MQ=255) aTCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGAt < 2:9014442/150‑1 (MQ=255) aTCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGAt < 1:7291451/150‑1 (MQ=255) aTCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGAt < 2:4412057/150‑1 (MQ=255) ggCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTc < 1:4849719/150‑1 (MQ=255) tttACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTcaca < 1:4271973/150‑1 (MQ=255) tttACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTcaca < 1:4270749/150‑1 (MQ=255) tttACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTcaca < 2:6675394/150‑1 (MQ=255) tttACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAAACC‑GCTCCTACGGGGATGTcaca > 2:3350006/1‑150 (MQ=255) tACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACaga < 1:2723516/150‑1 (MQ=255) ccgcGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGccc > 2:5952798/1‑150 (MQ=255) cgcACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGaa < 1:5767567/150‑1 (MQ=255) cGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGGTTACGCGACGGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCGTCGCGGGGGCACCC‑GCGCCGACGGGGCAGTCCCAGCGCCCCACCAcggcg > 2:8081645/1‑150 (MQ=255) ggCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGAcggcgg < 1:1717695/150‑1 (MQ=255) gccgtatccgcttgcgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGt < 1:5266080‑M1/69‑1 (MQ=255) cTTGAACCGGGAAAAATCGGCGTCGTGCATGAGGCCTCCACGTCGGCGGCGTAGTTTCCGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGt < 1:3279894/150‑1 (MQ=39) cTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGt < 1:5952798/150‑1 (MQ=255) ttGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCGACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTg > 2:3650371/1‑150 (MQ=255) ttGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCGTCGCGGGGGGACCC‑CCGCCGGCGGGGGTGTCCCACAGCCCCAAGACCGCcggggg > 1:2220192/1‑148 (MQ=255) aaCAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCt < 1:8290809/150‑1 (MQ=255) aaCAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCGACGGGGATGTCACACAGCCCGAAGACGGCGGGGTGCCt > 2:8999189/1‑150 (MQ=255) aCAGGGAAAAAGCGTCGTCTTGCATGCTGCCGCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTGCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTg > 2:2139416‑M2/1‑149 (MQ=255) cAGGGAAAAATCGTCGTCGTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgt > 1:106838‑M2/1‑148 (MQ=255) gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTATTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtag > 1:3132216‑M2/1‑146 (MQ=255) gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtag < 1:21555‑M1/150‑41 (MQ=255) gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtag > 2:9099592‑M2/1‑146 (MQ=255) gggAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtag > 1:9145092‑M2/1‑146 (MQ=255) aaaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGTACCC‑CCTCCGACGGGGAGGGCACAGAGCCCGAAGACGGCGGGGGGCCGgtaggagcg < 2:7417373‑M2/150‑10 (MQ=255) aaaTCGTCGTCTGGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcg > 2:1138096‑M2/1‑141 (MQ=255) cgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGagctg > 2:8564078‑M1/68‑148 (MQ=255) cgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCgg > 2:3917818‑M1/68‑150 (MQ=255) cgccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCgg > 2:7240754‑M1/68‑150 (MQ=255) aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgg < 1:5151333‑M1/150‑47 (MQ=255) aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg > 2:5989471‑M2/1‑140 (MQ=255) aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg > 1:6766556‑M2/1‑140 (MQ=255) aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg > 2:5440336‑M2/1‑140 (MQ=255) aaTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgg > 1:7162713‑M2/1‑140 (MQ=255) aaTCGTCGTCTTGCACGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCTGGTGAACCC‑GCTCCTACGGGGATTTCTCAGAGCCCTAAGACGGCGGGGTGCCTttagtagctg > 2:697332‑M2/1‑140 (MQ=255) gccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCggg > 2:8394483‑M1/67‑150 (MQ=255) gccgcgggcgggagcttaacctgtcgccgcacctgatgaagaagcacgattgatggttttgcgtaaCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCggg > 2:933730‑M1/67‑150 (MQ=255) aTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGTAACCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcggg < 1:5549304‑M1/150‑48 (MQ=255) aTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcggg < 1:7399853‑M1/150‑48 (MQ=255) aTCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcggg > 2:7583351‑M2/1‑139 (MQ=255) cgtcgtCTTGCATGACGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggtt > 2:6622095‑M2/1‑137 (MQ=255) tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGTAACC‑GCTCCTAAGGGGCTGTCAAAGAGCCCGAAGACGGCGGGGGGGCTgtaggggcgggttaa < 2:1265132‑M2/150‑16 (MQ=255) tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttca > 2:6294545‑M2/1‑135 (MQ=255) tcgtcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGGGTACCC‑CCGGCGTGGGGGTTGTGACAGAGCCCGGAGTGGGGGGGGTGGCTGGTGGTGGGGGttga > 2:1265129/1‑148 (MQ=255) gcgtctTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttca > 2:5957685‑M2/2‑135 (MQ=255) tcTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcaccc > 1:6396941‑M2/1‑132 (MQ=255) ttGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgc < 2:2475043‑M1/150‑57 (MQ=255) ttGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCGTCGCGGGGGGGCCC‑GCGGCGGCGGGGGGGGGCCAGCGCCCGGAGACGGCGGGGGGCCGGGGGGGGCGGGGTGAccccc > 1:3648456/1‑148 (MQ=255) tggcaTGATGCCTCCACGTAGGGGGCGTTTTTTACGCGAGTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgc > 1:817560‑M2/3‑130 (MQ=255) gCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCCCAGAGCCCGAAGACGGCGGGGTGCCCggaggagcgggttcacccgcga < 2:6706715‑M2/150‑23 (MQ=255) cATGTTGCCTCCCCGTAGGCGGGGTTGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACcggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaa < 2:2018412‑M1/150‑60 (MQ=255) cATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTAGCGGGTGAAACC‑GCACCAAACGGGGTGTGACAGAGCCCCAAGACGGCGGGGTGGCGgtgggagcgggttgacccccgac < 2:988649‑M2/150‑24 (MQ=255) ggCCCCCCCGTCGGCGGCTTTGTTTCCGCGAGTGGGGGGCGGTGTGCCGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTCGGGGTTTGTCACAGAGCCCGAAGAGGGGGGGGTGCCTGTTGGAGCGGGTTCCCCCGCGAAGAGGc < 2:641438/149‑1 (MQ=25) cTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGTAACC‑CCTCCTACGGGGGTGTCACATAGGCCCAAGAACCGGGGGTGCCGGTAGGAGCGGGTTAACCCCCCAAGAGGCCCg > 2:5754070/1‑150 (MQ=255) cTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCGTCGCGGGGGGTCCC‑CCTCCCACGGGGGTGTCACAGCGCCCGCACGCCGCGGGGTGGCGGGGGGGGCGGGGTCACCCGCGCCCAGGcccc > 2:5521128/1‑149 (MQ=255) tCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGCTGTCCCAGAGCCCGACTACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgc < 2:7463366‑M2/150‑33 (MQ=255) tgttgccgcgTCGGTGGGGCGGTGTGCCGCCTGGGCGGGCCTCTTGGCGGGTGAACCC‑GCTCCTCCGGGGATGTCACAGAGCCCGCAGACGGGGGGGTGCCTGTTGGTGCGGGTTCACCCGCGACGAGGCCCGCACAGGTTACGCAAAAc < 2:8204874/144‑1 (MQ=255) tgTTTCCGCGCCTGTGGGGGGGTGTGCTGCGTGTGGGGGCCTCTGCGGGGGTGAACCC‑GCGCCCCGGGGTATGTCACCGCGCCCGAAGACGGGGGGGTGCCTGTAGGAGGGGGTCCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAAc < 2:3592328/149‑1 (MQ=255) tgtgCTGCCTGGGGGGGCCTC‑TCGGGGGTTCACCCGGCTCCTCGGGGGTTGACACTGAGCCCTAATCGGGGGGGGGGCCTTTCGGTGGGGGTCCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTtcatca < 2:3265540/150‑1 (MQ=255) TCTTCGCGGGTGAAACC‑GCTCCTACCGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCCCGAATAGGCCCCCACAGGTTACGCAAAACCAACAAAAGTGCTTGTTCATCAGGTGCGGCGGCAGGTTAAg < 2:2264246‑M1/150‑1 (MQ=255) CTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCAGCAGGTGCGGCGACCGGTTAAGc < 2:6784517‑M1/150‑1 (MQ=255) ttCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCGgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatg < 2:5996079‑M2/150‑92 (MQ=255) TTCGCGGGTTAACCC‑GCTGCTACGGGGATTTCAAAGAGCCCGAATACGGCGGGGTGGCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGTCAGGGTAAGCt < 2:378425‑M1/150‑1 (MQ=255) TTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGATCCCGAAGACGGCGGGGTGCCGGTAGGAGCGGGGTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCAACAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAgca < 2:6311054‑M1/150‑2 (MQ=255) gcgggggTTACCCG‑GCTCCTAGGGTTTTTTCACAGTGCCCGAAGAGGGGGGGGTGCCTTTAGCCGGGGTTACACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTc < 2:8669581/146‑1 (MQ=255) gcgGGTGCCCCG‑GCTCCTACcgcccccccgccgtcttcgggctgtgggtcatccccgtcggtgcgggtccccccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaa < 2:4540889‑M1/150‑131 (MQ=255) gcgGGTGAACCC‑GCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactaccccgcctacgtggaggcctaatgcac > 1:8893399‑M1/1‑20 (MQ=255) gcgGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaa < 2:4828765‑M2/150‑95 (MQ=255) GCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGCCAGGTTAAGCTccc < 1:8263188‑M1/150‑1 (MQ=255) GCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTccc < 2:4178539‑M1/150‑1 (MQ=255) GCGGGTGAACCC‑GCTACTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATAGTGCTTATTCATAAGGTTCGGCGACAGGTTAAGCTccc < 1:8693898‑M1/150‑1 (MQ=255) CGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTcccg < 1:1865901‑M1/150‑1 (MQ=255) gggTGAACCC‑GCTCCTACaggcaccccgccgtcttcgggctctgtgacatccccgtaggagcgggttcacccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaaga > 2:4680935‑M1/1‑18 (MQ=255) GTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTcccgccc < 2:232975‑M1/150‑1 (MQ=255) tGACCCC‑GCCCCGACcgcccccccgccgtctgcgggcactgtgacaccccggtaggggcgggttcccccgcgaagaggcccgcacaggctgcacaccgccccacagtcgcgtaaactacgccgcctacgtggaggcatcatgcaagacga < 2:7906581‑M1/150‑136 (MQ=255) GAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCccgcccgc < 2:6093066‑M1/150‑1 (MQ=255) | CGGCACGGTCGTGGCGGATCGGCTTTACGCCGCGCACTTCGGCCTTGAACAGGGAAAAATCGTCGTCTTGCATGATGCCTCCACGTAGGCGGCGTAGTTTACGCGACTGTGGGGCGGTGTGCAGCCTGTGCGGGCCTCTTCGCGGGTGAACCC‑GCTCCTACGGGGATGTCACAGAGCCCGAAGACGGCGGGGTGCCTGTAGGAGCGGGTTCACCCGCGAAGAGGCCCGCACAGGTTACGCAAAACCATCAATCGTGCTTCTTCATCAGGTGCGGCGACAGGTTAAGCTCCCGCCCGC > NC_002947/2052400‑2052696 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |