| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,065,150 | C→G | 11.9% | intergenic (+42/‑165) | PP_1838 → / → PP_1839 | membrane protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,065,150 | 0 | C | G | 11.9% | 573.0 / 54.5 | 185 | intergenic (+42/‑165) | PP_1838/PP_1839 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (53/110); new base G (8/14); total (61/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.77e-01 | |||||||||||
Only 100 of 193 total aligned reads displayed.
AGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACT > NC_002947/2065001‑2065299 | aGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTcc < 2:8312167/150‑1 (MQ=255) gCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTccc < 1:4969542/150‑1 (MQ=255) cccGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCca < 1:3857544/150‑1 (MQ=255) cccGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCca < 1:5653599/150‑1 (MQ=255) ccGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCGTGCCCCCTccccc > 2:2287008/1‑148 (MQ=255) ggACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAg > 1:3905402/1‑150 (MQ=255) gACCCGCCGGAATTGCTCACGACGCTGGACGCGTATAGCCCGACCGCGACCACGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGACGTAAACGGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAgg < 2:2161444/150‑1 (MQ=38) aCCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGc < 1:3501082/150‑1 (MQ=255) aCCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGc > 2:9059084/1‑150 (MQ=255) aGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCAtt < 1:8955124/150‑1 (MQ=255) gCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTg < 2:5132548/150‑1 (MQ=255) gCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATACGCGGGCTTGCCCCCTCCCA‑CACGCAATg > 2:5033439/1‑150 (MQ=255) ccGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGc < 1:2182980/150‑1 (MQ=255) ggAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGcac > 2:435982/1‑150 (MQ=255) gAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGcacn < 1:8634109/150‑2 (MQ=255) aaTGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAgg < 2:7962/150‑1 (MQ=255) gCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGtc > 2:7779858/1‑149 (MQ=38) cTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTc < 2:1853669/150‑1 (MQ=255) cTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTc < 1:6576852/150‑1 (MQ=255) tCAAGAAGCTGGCAGCGTATATCGAGACCGCGCCCAAGAGCCTGCTGGATAACACCGCCGGCGTGGGGCAGGGCACACCGCAGTACACCGGGGCCGCGTTGCGGCCGATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCg < 2:1593300/150‑1 (MQ=255) tCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCCTTGCACAGGGttag > 1:6068705/1‑148 (MQ=255) aagaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGa < 1:5121876/150‑1 (MQ=255) gaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGGGTGCCCGCGCCCA‑CCGGCCTTGCACACGGTTGGGGcc > 1:1411034/1‑150 (MQ=255) gaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAAGGTCCGAAcc < 2:8053774/150‑1 (MQ=255) agCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAAccct < 1:3296146/150‑3 (MQ=37) agCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCtt < 1:4243702/150‑1 (MQ=255) tGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTtgtg < 2:2921341/150‑1 (MQ=255) ggAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGc < 2:3850886/150‑1 (MQ=255) gAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCa < 2:1275155/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACTCCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 2:2455696/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 2:4173987/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 1:625918/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 2:2455036/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 2:1029826/150‑1 (MQ=255) aGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAAGGTCCGAACCCTGTGCaat < 2:1364713/150‑3 (MQ=255) aGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCaat < 1:187141/150‑3 (MQ=37) cGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTc < 1:1179549/150‑1 (MQ=255) cGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCaatgc < 2:5345223/150‑5 (MQ=25) gTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTcc > 1:833120/1‑150 (MQ=255) gTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAAGGTCCGAACCCtgtg < 2:3921755/143‑1 (MQ=255) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCaatgcct < 1:7779858/150‑7 (MQ=21) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCt < 1:1912624/150‑1 (MQ=255) tatCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCtgt < 1:9059084/150‑1 (MQ=255) tatCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCtgt < 1:764834/150‑1 (MQ=255) tatCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGAGCACGGCACACCGACGGAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCtgt < 1:2634090/150‑1 (MQ=255) tCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCtgtgg < 2:6158745/150‑2 (MQ=21) tCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCtgtgg < 2:5915497/150‑2 (MQ=21) cAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGTACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGa < 2:3983616/150‑1 (MQ=255) gACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGc < 1:1718216/150‑1 (MQ=21) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCgg < 2:8633549/150‑1 (MQ=18) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCgg < 1:1109207/150‑1 (MQ=18) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCgg < 2:1760308/150‑1 (MQ=18) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCgg < 2:7895621/150‑1 (MQ=18) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 1:4045014/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 2:3351463/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 1:1255013/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 2:1316435/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 2:6412660/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCAGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 2:5121566/150‑1 (MQ=255) gcgACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCggcc < 1:4623018/150‑3 (MQ=255) gACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCaa < 1:3162889/150‑1 (MQ=255) gACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCaa < 1:8050634/150‑1 (MQ=255) aaGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCTTTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGGGAGCGGGCAAGccc < 1:1399911/150‑1 (MQ=255) ctgctgGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAATCGCGGGCGGGCCCCCGCCCC‑CACGCCATGCCCACGGGTCGGGCCGTTTTGAGGTGCAGTGCGCGCCGGCCAcccccccgca > 1:2809286/1‑144 (MQ=255) tgctgGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CCGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATg < 2:705237/150‑1 (MQ=255) tgctgGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCGTGCCCGCGCCCC‑CAGGCAATGCACAGGGTTAGGACCATGTGCAGGTCCAGTGCGGGCGGGCAAGCCCCCGCATg > 1:1504333/1‑150 (MQ=255) tgctgGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCGTGCCCCCGCCCC‑CAGGCATTGCACAGGGTTCGGACCGTGTGCTGGGCCAGTGCGAGCGGGCCAGCCCCCGacag > 1:6690716/1‑147 (MQ=255) aTAACCCCGCCGGCGGGGTGCCCGGCACACCGACGTAAACGGGGGCCGCGTTGCGGCCCTTTCGCGGGCTGGCCCGCTCCCA‑CCGGCTTTGCACAGGGTTCGGACCTTGGGCTGGTCCTGTGCGAGGGGGCAAGCCCGCGAATGGGcccc < 2:2390573/150‑1 (MQ=37) aaCACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAATCGCGGGCGTGGCCCCACCCA‑CAGGCAATTGAAAGGGGTGGGACCATTTGGAGGTGCAGTGCGGGCGGGCAACCCCCCGAAAGGGcccccc > 2:2251833/1‑148 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGcaca > 2:8181722/1‑150 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAGTCGCGGGCGTGCCCGCACCCC‑CAGGCCGTGCACAGGGGGCGGGCCGTGTGCCGGGCCGGGGCGGGCGGGCAACCCCGCGGCTGGGCCCCGcccc > 1:679398/1‑147 (MQ=255) tacttcGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CACGCAGTGCACAGGGGTGGGACCGTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGCATGGGCCCCGCACAAtt > 1:7485601/6‑150 (MQ=38) cgGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAATAGCGGGCGTGCCCCCGCCCACCCGCCATTGAACA‑GGTTAGGGCCGTGTGCCCGGGCAGTGCGGGCGGGCCACCCCCCCCAAGGGCCCCCCCCaaaatt > 2:3811716/1‑146 (MQ=255) ggtgCAGGGCCCCCCGACGTCACCCGGGGCCGCGTTGGGGCCCATGCGCGGGCTTGCCCGCGCCCA‑CGGGCATGGCCCAGGGTTCGGACCTTGTGCTGGTCGTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGa < 2:6199661/150‑1 (MQ=37) tgCCCGGCACACCTACGTAAACCGGGGCCGCGTGGGGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CCGGCATGGCACAGGTTTCGGACCTTGGGCCGGTCCTGTGGGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACt < 2:455846/150‑1 (MQ=37) ggCACGGCACCCCGAAGTAAACCGGGGCCGCGTTGCGGCCCATGCGCGGGCTTGCCCGCTCCCA‑CCGGCATTGCACAGGGTTCGGACCTTGGGCTGGTCCTGTGCGAGGGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACt < 2:450688/149‑1 (MQ=38) aCGGCACACCGAGGTACCCGGGGGCCGCGTTGGGGCCCATTCGGGGGCTGGCCCGCTCCCA‑CAGGCATTGCCCCGGGTGGGGACCTTGTGCCGGTCGTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGaa < 2:3143089/150‑1 (MQ=37) ggCACACCGATGTAAACCGGGGCCGCGTTGGGGCCCTTTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACCGGGTTCGGACCTTGTGCTGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACa < 1:8224608/150‑1 (MQ=38) gCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAGTCGCGGGCGTGCCCGCTCCCA‑CCGGCAGTGCACAGGGGTCGGACCGTGTGCAGGGCCGGGGCGCGCCGGCCAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGCCAGGACAt > 2:682915/1‑150 (MQ=255) acCGAAGTAAACCGGGGCCGGGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCTTTGCACAGGGTTCGGACCTTGTGCTGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATc < 1:2994458/150‑1 (MQ=255) cGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCACCCA‑CAGGCATTGCACAGGGGTCGGACCGTGTGCAGGTCCTGTGCGAGCGGGCCAGCCCGCGAATGGGCCCCGCCCAATTTTCCCGGACGGAACATTATccc > 2:7550184/1‑150 (MQ=38) cGGGGCCGCGTTGCGGCCCATTCGCGGGCTTTCCCCCGCCCA‑CAGGCCTTGCACAGGGTTCGGCCCATGTGGAGGTGCTGTGCGAGCGGGCAAGCCCGCGCATGGGGCCCGCCCAAATTTACCGGACTGAACATTATCCCCGCCCCAAgg > 2:5669230/1‑150 (MQ=255) cGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACTGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAgg < 2:2644498/150‑1 (MQ=255) ggggCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCGCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGCCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGt < 2:4845221/150‑1 (MQ=255) cctttCGGGGGCTTGCCCGCCCCCA‑CCGGCATTGCACCGGGTTCGGACCTTGTGCTGGTCCTGCGCGAGCGGGCACGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATc < 1:6571277/147‑1 (MQ=255) ctttCGGGGGGTTGCCCGCTCCCC‑CTGGCATTGCACAGGGTTGGGACCTTGTGCTGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATca < 2:6263067/148‑1 (MQ=255) cATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATca < 2:6041152/150‑1 (MQ=255) gCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGtt > 1:8124298/1‑150 (MQ=18) cccGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTc > 1:3598912/1‑150 (MQ=255) cccGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTc < 2:5393560/150‑1 (MQ=255) cccGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGGGCGAGGGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTc < 2:4878591/150‑1 (MQ=255) ccGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATTCCTGTGGGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCg > 1:4277709/1‑150 (MQ=18) ccGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCg > 2:871758/1‑150 (MQ=18) ccGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCg > 2:3604671/1‑150 (MQ=18) ccGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCg > 2:8866131/1‑150 (MQ=255) gCTCCCA‑CAGGAATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGtt < 1:6076458/150‑1 (MQ=255) tCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGa > 2:4378871/1‑150 (MQ=255) ccccA‑CCGGCCTGGCACTGGGTTCGGACCTTGGGCTGGTCCTGGGCGAGCGGGCACGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGa < 1:2794609/149‑1 (MQ=255) ccA‑CAGGCATTGCACAGGGTTCGGACCTTGTTCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACt > 2:1371417/1‑150 (MQ=255) ccA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACt > 1:5915462/1‑150 (MQ=255) | AGCCCGGACCAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACT > NC_002947/2065001‑2065299 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |