| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,065,159 | T→C | 15.2% | intergenic (+51/‑156) | PP_1838 → / → PP_1839 | membrane protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,065,159 | 0 | T | C | 15.2% | 431.1 / 55.7 | 187 | intergenic (+51/‑156) | PP_1838/PP_1839 | membrane protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (44/98); new base C (8/18); total (70/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.61e-01 | |||||||||||
Only 100 of 190 total aligned reads displayed.
CAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACTGAGAGGGT > NC_002947/2065010‑2065307 | gCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTg < 2:5132548/150‑1 (MQ=255) gCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATACGCGGGCTTGCCCCCTCCCA‑CACGCAATg > 2:5033439/1‑150 (MQ=255) ccGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGc < 1:2182980/150‑1 (MQ=255) ggAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGcac > 2:435982/1‑150 (MQ=255) ggAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGcac > 2:1480367/1‑150 (MQ=255) gAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGcacn < 1:8634109/150‑2 (MQ=255) gAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGcaca > 1:6041152/1‑150 (MQ=255) aaaTGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAg < 1:9085537/150‑1 (MQ=255) aaTGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAgg < 2:7962/150‑1 (MQ=255) gCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGtc > 2:7779858/1‑149 (MQ=38) cTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTc < 1:6576852/150‑1 (MQ=255) cTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTc < 2:1853669/150‑1 (MQ=255) tCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGGGGGGCCGCGCCCA‑CCCGCAGTGCACAGGGtggg > 1:2830778/1‑147 (MQ=255) tCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCACCCA‑CAGGCATTGCACAGGGTTCg > 2:9025460/1‑150 (MQ=255) aagaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGa < 2:1678630/150‑1 (MQ=255) aagaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGa < 1:435982/150‑1 (MQ=255) aagaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGa < 1:5121876/150‑1 (MQ=255) gaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGAcc < 2:2002221/150‑1 (MQ=255) gaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAAGGTCCGAAcc < 2:8053774/150‑1 (MQ=255) gaagCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCGTGGCCGCGCCCA‑CAGGCAGTGGACAGGGTTCGGGcc > 1:1410792/1‑150 (MQ=255) agCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAAccct < 1:3296146/150‑3 (MQ=37) agCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCtt < 1:4243702/150‑1 (MQ=255) ggAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGc < 2:3850886/150‑1 (MQ=255) ggAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGc > 2:1255013/1‑150 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACTCCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 2:2455696/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 2:4173987/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 1:625918/150‑1 (MQ=255) aaGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAg < 2:2418369/150‑1 (MQ=255) aGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAAGGTCCGAACCCTGTGCaat < 2:1365778/150‑3 (MQ=255) aGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCaat < 1:187141/150‑3 (MQ=37) cGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTc < 1:1179549/150‑1 (MQ=255) cGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCaatgc < 2:5345223/150‑5 (MQ=25) gTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTcc < 1:4805547/150‑1 (MQ=255) gTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTcc < 1:6612391/150‑1 (MQ=255) gTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTcc > 1:833120/1‑150 (MQ=255) gTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAAGGTCCGAACCCtgtg < 2:3921755/143‑1 (MQ=255) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCaatgcct < 2:3451175/150‑7 (MQ=21) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCaatgcct < 1:7779858/150‑7 (MQ=21) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCt < 1:3028577/150‑1 (MQ=255) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCt < 1:1912624/150‑1 (MQ=255) tataTCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCt < 1:1693724/150‑1 (MQ=255) tatCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCtgt < 1:764834/150‑1 (MQ=255) tatCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGAGCACGGCACACCGACGGAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCtgt < 1:2634090/150‑1 (MQ=255) tCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCtgtgg < 2:5915497/150‑2 (MQ=21) tCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCCTTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGc > 2:6988968/1‑150 (MQ=255) cAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGTACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGa < 2:3983616/150‑1 (MQ=255) cAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGa < 1:2804699/150‑1 (MQ=18) aGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCATGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCATGCCCGCTCCCA‑CAGGCAGTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAg > 2:1295915/1‑150 (MQ=255) aGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAg > 2:6200051/1‑150 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCgg < 2:7895621/150‑1 (MQ=18) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCgg < 2:8633889/150‑1 (MQ=18) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCgg < 1:1109207/150‑1 (MQ=18) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCC‑CAGGCATTGCACCGGGTTCGGACCATGTGCAGGTCCTGTGCGAGCgg > 2:4682809/1‑150 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 1:4045014/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 2:6412660/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 1:2638019/150‑1 (MQ=255) ccGCGACCAAGAGCCTGCTGGATAACACCGCCAGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCgg < 2:5121566/150‑1 (MQ=255) gcgACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGc < 2:7576084/150‑1 (MQ=255) gACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCaa < 1:8050634/150‑1 (MQ=255) gACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCaa < 2:3104580/150‑1 (MQ=255) aaGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGccc > 2:1363723/1‑150 (MQ=255) gagCCTGCTGGGTAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCcgc < 2:4848212/150‑1 (MQ=255) tgctgGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCGTGCCCCCGCCCC‑CAGGCATTGCACAGGGTTCGGACCGTGTGCTGGGCCAGTGCGAGCGGGCCAGCCCCCGacag > 1:6690716/1‑147 (MQ=255) aTAACACCGCCGGCGTGGTGCACGGCACACGGAATTAAACGGGGGCCGGGTTGCGGCCCTTGCGCGGGCTTGCCCGCTCCCA‑CCGGCAGTGCACTGGTTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCATGCCCGCGAATGGGcccc < 2:2390210/150‑1 (MQ=255) aaCACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAATCGCGGGCGTGGCCCCACCCA‑CAGGCAATTGAAAGGGGTGGGACCATTTGGAGGTGCAGTGCGGGCGGGCAACCCCCCGAAAGGGcccccc > 2:2251833/1‑148 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGcaca > 2:8181722/1‑150 (MQ=255) acCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAGTCGCGGGCGTGCCCGCACCCC‑CAGGCCGTGCACAGGGGGCGGGCCGTGTGCCGGGCCGGGGCGGGCGGGCAACCCCGCGGCTGGGCCCCGcccc > 1:679398/1‑147 (MQ=255) tacttcGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CACGCAGTGCACAGGGGTGGGACCGTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGCATGGGCCCCGCACAAtt > 1:7485601/6‑150 (MQ=38) gccgGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAAtt < 2:6089306/150‑1 (MQ=255) cgGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCAATAGCGGGCGTGCCCCCGCCCACCCGCCATTGAACA‑GGTTAGGGCCGTGTGCCCGGGCAGTGCGGGCGGGCCACCCCCCCCAAGGGCCCCCCCCaaaatt > 2:3811716/1‑146 (MQ=255) ggCGTGGTGCACGGCACACCGAATTAACCGGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CCGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTc < 2:1836688/150‑1 (MQ=255) cGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTccc < 2:7516530/150‑1 (MQ=255) ggCACGGCACCCCGAAGTAAACCGGGGCCGCGTTGCGGCCCATGCGCGGGCTTGCCCGCTCCCA‑CCGGCATTGCACAGGGTTCGGACCTTGGGCTGGTCCTGTGCGAGGGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACt < 2:450688/149‑1 (MQ=38) ggCACACCGATGTAAACCGGGGCCGCGTTGGGGCCCTTTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACCGGGTTCGGACCTTGTGCTGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACa < 1:8224608/150‑1 (MQ=38) acCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCCATGCACAGGGTTCGGTCCGTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAAAGGGCCCCGCACAAATTTCCCGGACTGAACATTATc > 2:8788770/1‑150 (MQ=37) cGAAGTAAACCGGGGCCGCGTTTCGGCACATTCGCGGGCTTGCCCGCTCCCA‑CAGGCAATGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAACACCCCGAATGGGCACCGCACAATATTCCCGGACTGAACCGTATccc > 2:8392224/1‑150 (MQ=37) aaaCCGGGGCCGCGTTGCGGCCCATTAGCGGGCTTGCCCCCTCCCA‑CAGGCAATTGACCGGGTTGGGACCTTGTGGAGGTGCTGTGCGGGCGGGCAACCCCCCGAAAGGGCCCCGCACAAATTTACCGGGCTGTAAAATATAcccccccc > 2:6197812/1‑150 (MQ=255) cGGGGCCGCGTTGCGGCCCATTCGCGGGCTTTCCCCCGCCCA‑CAGGCCTTGCACAGGGTTCGGCCCATGTGGAGGTGCTGTGCGAGCGGGCAAGCCCGCGCATGGGGCCCGCCCAAATTTACCGGACTGAACATTATCCCCGCCCCAAgg > 2:5669230/1‑150 (MQ=255) cGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACTGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAgg < 2:2644498/150‑1 (MQ=255) ggCCGCGTGGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGTGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCa < 1:9025460/150‑1 (MQ=255) cctttCGGGGGCTTGCCCGCCCCCA‑CCGGCATTGCACCGGGTTCGGACCTTGTGCTGGTCCTGCGCGAGCGGGCACGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATc < 1:6571277/147‑1 (MQ=255) cATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATca < 2:6041152/150‑1 (MQ=255) ggtttGCCCGCTCCCC‑CTGTCTTTGCACTGGTTTCGGACGTTTTGCTGGTCGTGTGCGCGGGGGCACGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTg < 1:566459/147‑1 (MQ=255) gCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGtt > 1:3664921/1‑150 (MQ=18) gCCCGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGGGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGtt > 1:8124298/1‑150 (MQ=18) cccGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTc < 2:5393560/150‑1 (MQ=255) cccGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTc > 1:3598885/1‑150 (MQ=255) ccGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATTCCTGTGGGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCg > 1:4277709/1‑150 (MQ=18) ccGCTCGCA‑CAGGACCTGCACAAGGTCCGAACCCTGTGCAATGCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCg > 2:3604671/1‑150 (MQ=18) gCTCCCA‑CAGGCATTGCACCGGGTTCGGACCTTGTGCCGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGtt < 1:1473879/150‑1 (MQ=255) gCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGtt < 2:3309558/150‑1 (MQ=255) gCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGtt > 1:1319713/1‑150 (MQ=255) gCTCCCA‑CAGGAATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGtt < 1:6076458/150‑1 (MQ=255) tCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGa > 2:4378871/1‑150 (MQ=255) a‑caGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACTga > 2:7255014/1‑150 (MQ=255) a‑caGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACTga > 1:1767061/1‑150 (MQ=255) a‑caGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACTga < 1:7255014/150‑1 (MQ=255) a‑caGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACTga > 2:4767445/1‑150 (MQ=255) a‑caGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATAACACACCTGGTGTTCGTTGACTga > 2:704874/1‑150 (MQ=255) gCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACTGAGAgg < 2:6777960/150‑1 (MQ=255) | CAGCCGGAAATGCTCAAGAAGCTGGAAGCGTATATCCAGACCGCGACCAAGAGCCTGCTGGATAACACCGCCGGCGTGGTGCACGGCACACCGAAGTAAACCGGGGCCGCGTTGCGGCCCATTCGCGGGCTTGCCCGCTCCCA‑CAGGCATTGCACAGGGTTCGGACCTTGTGCAGGTCCTGTGCGAGCGGGCAAGCCCGCGAATGGGCCCCGCACAATTTTCCCGGACTGAACATTATCCCCGCCCCAAGGTCAGTTATTCAGGCATCACACACCTGGTGTTCGTTGACTGAGAGGGT > NC_002947/2065010‑2065307 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |