| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,173,782 | T→A | 5.8% | intergenic (+352/+51) | PP_5484 → / ← PP_1924 | hypothetical protein/phosphinothricin N‑acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,173,782 | 0 | T | A | 5.8% | 955.8 / 31.5 | 285 | intergenic (+352/+51) | PP_5484/PP_1924 | hypothetical protein/phosphinothricin N‑acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (125/141); new base A (11/6); total (138/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.11e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.29e-01 | |||||||||||
Only 100 of 288 total aligned reads displayed.
GTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATACCCCACATCATGCC > NC_002947/2173633‑2173930 | gtggtACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCAt > 1:7502165/1‑150 (MQ=255)gtggtACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCAt > 2:1729161/1‑150 (MQ=255) ggtACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTc < 1:3447497/150‑1 (MQ=255) ggtACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACAGGCAGCTATGGGTCGAATGCGGCCTGTCGTGACCGGCTGCAATc < 1:9065325/150‑1 (MQ=37) gtACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCg > 1:6807326/1‑150 (MQ=255) tACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGa < 1:8913201/150‑1 (MQ=255) tACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTATGGGTCGAATGCGGCCTGTCGTGACCGGCTGCAATCGa < 2:2783240/150‑1 (MQ=37) ccGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGAcc > 1:1183006/1‑150 (MQ=255) ccGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGAcc > 1:4960892/1‑150 (MQ=255) tGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAg < 2:7642215/150‑1 (MQ=255) gACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGc > 1:2081175/1‑150 (MQ=255) gTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGCCAGGCCGCATTCGACCCATAGCTGCCTTCcgcg < 1:218334/150‑1 (MQ=255) gTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTcgcg < 1:3225945/150‑1 (MQ=255) gTCAGGCGTGTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTGGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGAGTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTcgcg < 2:5347134/150‑1 (MQ=255) tCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCgg > 2:1952558/1‑150 (MQ=255) gTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACa > 2:2257922/1‑150 (MQ=255) gTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACa < 2:7167037/150‑1 (MQ=255) ttGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGt > 2:4854765/1‑150 (MQ=255) ggggcgggCCCCCCCAACCGGGCTGCTATGCCCA‑GCATGGTTTGTTGTTTCGCGGCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCAc < 1:2571541/144‑1 (MQ=255) aGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCa < 1:96071/150‑1 (MQ=255) gggACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCAc > 2:2538990/1‑150 (MQ=255) ggACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACt < 2:9159627/150‑1 (MQ=255) aCGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTgg > 1:403819/1‑150 (MQ=255) gCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGAc > 1:1738510/1‑150 (MQ=255) cccccccAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGAcc < 2:8876653/150‑1 (MQ=255) ccccccAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTg > 1:2016651/1‑115 (MQ=255) ccccccAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGAccc > 1:1548764/1‑150 (MQ=255) ccccAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCAGTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCctc > 2:6859249/1‑150 (MQ=255) cccAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCctct > 1:4311968/1‑150 (MQ=255) cccAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCctct > 1:2362461/1‑150 (MQ=255) cGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAgg > 1:5343431/1‑150 (MQ=255) cGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAgg > 2:2959214/1‑150 (MQ=255) cGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAgg < 2:5107705/150‑1 (MQ=255) ggCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGc > 2:2371127/1‑150 (MQ=255) cTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCAc < 2:4915806/150‑1 (MQ=255) tAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGAAGCCGGTCACGACAGGCCGCAATCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACAGGGACCCTCTAACGAGGCACTGGGa > 1:5122845/1‑150 (MQ=255) cgcATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGAttt < 1:6452191/150‑1 (MQ=255) gcATCCAGTGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTg < 1:7125441/150‑1 (MQ=255) gcATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTg < 2:5839260/150‑1 (MQ=255) cATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTgg < 1:658907/150‑1 (MQ=255) cATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTgg < 2:1769238/150‑1 (MQ=255) cATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTgg < 1:7610912/150‑1 (MQ=255) cATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTgg < 1:144105/150‑1 (MQ=255) ccAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGAt > 1:7233541/1‑150 (MQ=255) cAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATa < 1:483959/150‑1 (MQ=255) aGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAg < 1:8714543/150‑1 (MQ=255) tggtggTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGc < 2:7353349/150‑1 (MQ=255) ggtggtTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGAGAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGcc < 2:2568408/150‑1 (MQ=255) gtggtTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCt > 2:4672665/1‑150 (MQ=255) ggtTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGACGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTaa > 2:3241666/1‑150 (MQ=255) gtTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAAt < 2:8535238/150‑1 (MQ=255) gtTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAAt < 1:4142145/150‑1 (MQ=255) gtTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAAt > 1:5180300/1‑150 (MQ=255) gtTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAAt < 1:3079042/150‑1 (MQ=255) ttAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATg < 1:8709425/150‑1 (MQ=255) aGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGa < 2:1548764/150‑1 (MQ=255) aGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGa < 1:4244726/150‑1 (MQ=255) cgccCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGcc > 1:2933736/1‑150 (MQ=255) gccCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGa > 2:432969/1‑130 (MQ=255) gccCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCt > 2:481777/1‑150 (MQ=255) ccccATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCggg < 2:1306705/150‑1 (MQ=255) ccccATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCggg > 2:6282351/1‑150 (MQ=255) ccccATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCggg < 2:6605137/150‑1 (MQ=255) ccccATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCggg < 1:600976/150‑1 (MQ=255) ccccATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCggg < 2:8461098/150‑1 (MQ=255) ccATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGt > 1:2860491/1‑150 (MQ=255) cATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCgggggg < 1:3634113/150‑3 (MQ=255) aTCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGa > 1:3769594/1‑150 (MQ=255) aTCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGa < 2:8140278/150‑1 (MQ=255) cACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAg < 1:3869139/150‑1 (MQ=255) gggCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGcc > 1:1014544/1‑150 (MQ=255) cAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTCACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTc < 2:7896218/150‑1 (MQ=255) cAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTc < 2:2146105/150‑1 (MQ=255) cAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTc < 2:6118355/150‑1 (MQ=255) cTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTc > 2:2813239/1‑150 (MQ=255) tttGGGTCGATTGCAGCCGGACACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCa < 2:6409075/150‑1 (MQ=255) tatGGGTCGAATGCGGCCTGTCGTGACCGGCTGCAATCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGAttt > 2:5572799/3‑106 (MQ=18) tGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCAcc < 1:8270419/150‑1 (MQ=255) gTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGaa < 2:4031689/150‑1 (MQ=255) gTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGaa > 2:1650010/1‑150 (MQ=255) tCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGAGTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGaaa > 1:4725343/1‑150 (MQ=255) tCGAATGCGGCCTGTCGTGACCGGCTGCAATCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGaaa > 2:2029282/1‑150 (MQ=38) tCGAATGCGGCCTGTCGTGACCGGCTGCAATCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGaaa > 2:5968195/1‑150 (MQ=38) tCGAATGCGGCCTGTCGTGACCGGCTGCAATCGACCCAAAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGaaa > 2:348237/1‑150 (MQ=37) cGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAAt < 2:577051/150‑1 (MQ=255) aTTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAAGGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCa < 1:4991545/150‑1 (MQ=255) tGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCaaa < 2:721646/150‑1 (MQ=255) cAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAAcc > 1:945478/1‑150 (MQ=255) gtcgtgACCGGCTGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAAt > 1:4485861/6‑150 (MQ=255) tCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATa < 1:5757905/150‑1 (MQ=255) aCGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATAcc < 2:1183006/150‑1 (MQ=255) cGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATAccc < 2:5498283/150‑1 (MQ=255) gACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAg < 1:2511193/103‑1 (MQ=255) gACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATAcccc > 1:6169536/1‑150 (MQ=255) gACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATAcccc > 1:5458828/1‑150 (MQ=255) aGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATACCCcaca > 1:8572617/1‑150 (MQ=255) tgCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATACCCCAcatcat > 1:7772583/2‑150 (MQ=255) cGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGCCCTTCGTCACCGAAATc < 2:4243369/127‑1 (MQ=255) gCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATACCCCACATCATg > 2:4983816/1‑150 (MQ=255) aTTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATACCCCACATCATGcc < 1:6020856/150‑1 (MQ=255) | GTGGTACCGGTTGACCGTAACCGGTCAGGCGTTTGCGGTAAGGGACGGCCCCCCCAAACCGGCTGCATAGCGCATCCAGGGTTGGTGGTTAGCCGCCCCCCCATCACGGGCAGCTTTGGGTCGATTGCAGCCGGTCACGACAGGCCGCATTCGACCCATAGCTGCCTTTCGCGGAAGACAGTCAAACTCACTGGGACCCTCTAACGAGGCACTGGGATTTGGGATAGGAAGCCTAATGGAGCCTCGGGGTGAAGGCCTTCGTCACCGAAATCAAACCGCCAATACCCCACATCATGCC > NC_002947/2173633‑2173930 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |