| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,243,291 | C→G | 5.3% | intergenic (+73/‑208) | gltX → / → PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,243,291 | 0 | C | G | 5.3% | 366.7 / 6.8 | 117 | intergenic (+73/‑208) | gltX/PP_t25 | glutamate‑‑tRNA ligase/tRNA‑Ala |
| Reads supporting (aligned to +/- strand): ref base C (54/55); new base G (4/2); total (59/58) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.28e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
GGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTCCACAGCG > NC_002947/2243143‑2243440 | ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCTCGAATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:1877710/150‑1 (MQ=255)ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:2598623/150‑1 (MQ=255)ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:2598613/150‑1 (MQ=255)ggCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCg < 2:2598515/150‑1 (MQ=255) gCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCgg < 2:2312960/150‑1 (MQ=255) ctGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCAc < 1:6822456/150‑1 (MQ=255) ggACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGc < 1:5119222/150‑1 (MQ=255) aCCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGccc < 1:3702266/150‑1 (MQ=255) ctgctgGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCCAAAGCAAAGGTCAAATCAAAATAGCATTAGCCCGCACcccccc > 2:4591003/1‑148 (MQ=255) tggggtgTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCGAAAGCAAAGGGAAATTCAAAAACCCATACGCCCGCCCGCCCCCGCCcccac > 2:1331113/1‑149 (MQ=255) ggggttTCGAAGAAATAAAACAAAGAGTGGTAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCATTGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAgg < 2:1105923/150‑1 (MQ=255) gaagaaAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGTGCCCCCCCATGCCATGGGAAATTAAAAAAACCAATAGCCGGCACGCCCGCGCCCACAGGCCCACaaa > 2:6349059/1‑150 (MQ=255) gaagaaAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCGAATGCAAAGGTAAAATAAAGATAGCCGTCGCCGGCACCCCCCCTCCCACACGCCCACaaa > 2:8590418/1‑150 (MQ=255) agaaagaaAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGGGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑c < 2:1404434/150‑1 (MQ=255) gaaagaaaACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGGGGGGCCCCGAAAGCACAGGTAAAATAAAAATAGCAATAGCCCGCCCGCCCCCGCCCCCAGGCCAACAAAG‑cc > 2:3919905/1‑150 (MQ=255) aaagaaaACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAAAATAGCATTCGCCGGCACGCCCGCTACCACAGGCCAAATAAG‑ccc > 2:3688948/1‑150 (MQ=255) gaaaACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAAAGCAATGGTAAATTAAATATGGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACAAAG‑CCCC‑aa > 2:1457715/1‑150 (MQ=255) aaaCAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATAGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACGAAG‑CCCC‑aaaa > 2:7522481/1‑150 (MQ=255) aaGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCGCAAGGCATGGTAAATTGAAAATAGCAATCGGCCGCCCCCCCCCGCCCCCACGCCAACAAAA‑CCCC‑aaaaaaaac > 2:7709585/1‑147 (MQ=255) ttttGGTAAAAGCTGTTGGCTTCCATCGCCTTATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCTAATGCAATGTTAAATTCAATATCGCTTTCGCTGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCggg < 1:7386224/147‑1 (MQ=38) gcgTGGTAAATGGTGTTGGCTTCCATCGCCTTATTCAGCTTTGCACCTAACCTGGGGGAGCGGGGGTGCCCGCGAATGAATTGTTAAATTCAATAGCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCggg < 1:3518583/148‑1 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAAAGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCGCCCACAGGCCAACAAAG‑CCCC‑ACAAAACCGGGGTAgg > 2:6082379/1‑150 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCCCAATCAAAGGTAAAATAAATAAAGAAATAGCAGGCACCCCCCCACCCACACGCCAACAAAGCCCCC‑AAAAAACCcggcgaa > 2:7386224/1‑146 (MQ=255) ggAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCCCCCAAGCAAAGGTAAAAAAAAAATAGCAATAGCCCGCACCCCCCCACCCACACGCCAAAAAAA‑CCCCAAAAAAACCggggggg > 2:3503247/1‑147 (MQ=255) taataggtGTTGGCTGCAATGCCCTGATTCTGTTTTGCACCAAACCCGTGGGTGCGGGGGGGCCCGCTAATGAAATGTTAAATTAAATACCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAggg < 1:8034450/143‑1 (MQ=255) aGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCCCGAAAGCAAAGGTAAAATAAAAATAGCATTAGCCGGCACCCCCCCTACCACAGGCCAAAAAAT‑CCCC‑AAAAAAACCGGGGAGGGGGGt > 2:5714588/1‑150 (MQ=255) gTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCGAATGCAATGTTAAATTCAATATCGCCTCCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGt < 1:6632761/150‑1 (MQ=255) gTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCGAATGGAATGGTAAATTAAAAATAGCATTGGCCGGCACGCCCGCTCCCAAAGGGCAACAAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGt > 1:608251/1‑150 (MQ=255) ttGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTg < 2:2194098/150‑1 (MQ=255) gggCTTCCCTCGCCGGATACAGCTTTGCACCGACCCCGTGGGAGCGGGCGGGCCCGCTAATCCATTGGTAAATTCAATTTCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGa < 1:4840427/149‑1 (MQ=255) ggCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATACAATATCGCCTCCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGAt < 1:742098/150‑1 (MQ=255) gCTTCCATCGCCTGATTCAGCTTTGCACCTAACCCGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGAtt < 1:9050872/150‑1 (MQ=255) ctcccctCGCCTGATTCAGCTTTGCACCTACCCAGTGGGAGCGGGCGTGCCCGCGACTGCAATGGTAAATGCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTg < 2:1769429/144‑1 (MQ=255) cATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTAt < 2:4551733/150‑1 (MQ=255) tCGCCTTATTCTGCTTTGCACATAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGTTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCt < 1:7143075/150‑1 (MQ=255) tCGCCTTATTCAGCTTTGCACATAACCTGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCt < 1:1384847/150‑1 (MQ=255) tCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGGGCCCGCGAATGCAATGGTAAATACAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCt < 1:1384477/150‑1 (MQ=255) tCAGCTTTGCACCTAACCCGGGGGAGCGGGCGTGCCCGCTAATGAAATGGTAAATTCAATACCGCATCCCCCGCCCCCCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGaaaaaa < 1:6349059/150‑1 (MQ=255) tCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGGCCCCCCATTGAAAGGTAAAATAAATATAGCAATAGCCGGCACCCCCCCACCCACCCGCCAACGAAT‑CCCC‑CAAAAACCCGGGGAGGGGGGGGAGTGGTTGTTTTATGTGtaaaaa > 2:7141442/1‑150 (MQ=255) tCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATTCAATGGTAAAATCAATATCGCATTCGCCGGCACCCCCCCTCCCACAGGCCAACAAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGGGtaaaaa > 2:8358479/1‑150 (MQ=255) gatttGCACCTAACCTGTGGGCGGGGGCGTGCCCGCTAATGAAATGTTAAATTAAATATCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttt < 1:4118462/148‑1 (MQ=255) gCTTTGCACCTAACCTGTGGGTGGGGGCGTGCCCGCGAATGAAATGGTAAATTCAATATCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttt < 1:3503247/150‑1 (MQ=255) tttGCACCTAACCTGTGGGAGGGGGCGTGCCCGCGATTGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 1:1768483/150‑1 (MQ=255) tttGCACCTAACCTGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCTTTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 2:1993190/150‑1 (MQ=255) tttGCACCTAACCAGGGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAAttttt < 2:4025763/150‑1 (MQ=255) ccTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAatat < 2:3222977/150‑1 (MQ=255) aaCCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAtttt < 2:1476365/150‑1 (MQ=255) ccccgTGGGAGGGGGCGTGCCCGCTAATGCATTGTTAAATTCAATATCGCTTCCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 1:4008576/146‑1 (MQ=255) aCCTGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATAGCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 1:713200/150‑1 (MQ=255) aCCAGTGGGTGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 1:712983/150‑1 (MQ=255) aCCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATAGCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATAttttt < 1:5235963/150‑1 (MQ=255) ggAGCGGGGGTGCCCGCGAATGCATTGGTAAATTCAATCTCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAtt < 2:4599405/150‑1 (MQ=255) ggAGCGGGCGTGCCCGCGACTGCATTGGTAAATTCCATCTCGCTTTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAACACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAAtt < 2:4599680/150‑1 (MQ=255) gAGGGGGCGTCCCCGCTAATGAATGGGTAATTCCCCTAGCGCCGGCGCCGGAACCCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 1:2717797/150‑1 (MQ=255) gAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTa < 2:2214119/150‑1 (MQ=255) gCGTGCCCGCGAATGCATTTGTAAATTCAATTTCGCATGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGa < 1:6437727/150‑1 (MQ=255) gTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACa > 2:9009656/1‑150 (MQ=255) gTGCCCCCCAATGAACTGGTAATTTCTATATCGCATTCGCCGCCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGTGTTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTATTTTGACa < 1:7056563/150‑1 (MQ=255) ccggcgAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACTGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:4542825/4‑150 (MQ=25) ccggcgAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 1:7811235/4‑150 (MQ=25) ccggcgAATGCGATATTGAATTTACCATTGCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGcc > 2:7597674/4‑150 (MQ=25) ccGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:3476815/1‑150 (MQ=255) ccGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGccc > 1:210225/1‑150 (MQ=255) cgcgAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCt > 2:7633060/1‑150 (MQ=255) cgcgAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCt > 1:798615/1‑150 (MQ=255) gcgAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:2617721/1‑150 (MQ=255) gcgAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:5227213/1‑150 (MQ=255) gcgAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:5226507/1‑150 (MQ=255) gcgAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTg > 1:4337866/1‑150 (MQ=255) gCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATcc > 1:1657463/1‑150 (MQ=255) aaTGTTAAATTCAATCCCCCCTGCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa < 1:3205990/150‑1 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 1:7184574/1‑150 (MQ=255) aaTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGa > 2:7319600/1‑150 (MQ=255) aTGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGaa < 2:8860906/150‑1 (MQ=255) tgttAAATTCACTATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAAc < 2:8964734/147‑1 (MQ=255) gttAAATTCAATACCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACt < 1:1637113/148‑1 (MQ=255) ggTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACt > 2:5135578/1‑150 (MQ=255) gTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACtt > 1:4007623/1‑150 (MQ=255) aaaTTCAAGTGCGCCTTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTaa < 1:9054716/150‑1 (MQ=255) aaTACAATATCCCATTCCCCGCCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAat < 1:3688948/150‑1 (MQ=255) aTTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAata < 1:812028/150‑1 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg < 2:573618/128‑1 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAg > 1:573618/1‑128 (MQ=255) ttCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAatat > 2:7276135/1‑150 (MQ=255) ttgCATTCGCGGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc > 1:988502/3‑150 (MQ=255) tCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc < 2:6500616/150‑1 (MQ=255) tCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc > 2:5451074/1‑150 (MQ=255) tCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGcccc > 2:1205746/1‑150 (MQ=255) cggaTTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCg > 1:2722666/4‑150 (MQ=255) gCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAT‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAat < 1:8409921/139‑1 (MQ=255) gCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAat > 2:8409921/1‑139 (MQ=255) gCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGt > 1:1127124/1‑150 (MQ=255) cATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTc > 2:7360542/1‑150 (MQ=255) cATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTc > 1:9098339/1‑150 (MQ=255) cATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTc > 2:1125881/1‑150 (MQ=255) cATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATGTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTGAATATGCGCCCCGTc > 2:8792215/1‑150 (MQ=255) cATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGCTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTc < 2:6736761/150‑1 (MQ=255) tCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTCcac > 1:6432608/1‑150 (MQ=255) gCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTCCACAg > 2:8333574/1‑150 (MQ=255) cGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTCCACAGCg > 2:7926328/1‑150 (MQ=255) | GGCTCTGGACCTGCTGGGTGGGGTGTCGAAGAAAGAAAACAAAGAGTGGGAAAAGCTGTTGGCTTCCATCGCCTGATTCAGCTTTGCACCTAACCAGTGGGAGCGGGCGTGCCCGCGAATGCAATGGTAAATTCAATATCGCATTCGCCGGCACGCCCGCTCCCACAGGCCAACTAAG‑CCCC‑AAAAAACCGGGGTAGGGCGGTAAGTGATTGTTATCTGTGAAAAAATTTTTGAATATTTTTGAAAATTAGTTTGACAGCCCTGCAATCCGAACTTAATATGCGCCCCGTCCACAGCG > NC_002947/2243143‑2243440 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |