Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,297,739 T→G 8.2% intergenic (+20/+113) PP_5496 → / ← PP_2023 hypothetical protein/glutathione S‑transferase family protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,297,7390TG 8.2% 805.0 / 44.8 257intergenic (+20/+113)PP_5496/PP_2023hypothetical protein/glutathione S‑transferase family protein
Reads supporting (aligned to +/- strand):  ref base T (111/124);  new base G (20/2);  total (131/126)
Fisher's exact test for biased strand distribution p-value = 6.72e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 264 total aligned reads displayed.

ATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGC  >  NC_002947/2297590‑2297887
                                                                                                                                                     |                                                                                                                                                    
aTCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCt                                                                                                                                                      >  1:3385322/1‑150 (MQ=255)
 tCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCtt                                                                                                                                                     <  1:3992461/150‑1 (MQ=255)
   ggTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCCCAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTtgt                                                                                                                                                   <  2:1190193/150‑1 (MQ=255)
   ggTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTtgt                                                                                                                                                   <  1:7477802/150‑1 (MQ=255)
    gTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTtgtg                                                                                                                                                  >  1:158958/1‑150 (MQ=255)
    gTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTtgtg                                                                                                                                                  >  1:5255037/1‑150 (MQ=255)
     tCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTgg                                                                                                                                                 <  2:1468319/150‑1 (MQ=255)
       gTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGa                                                                                                                                               <  2:506646/150‑1 (MQ=255)
          cTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCg                                                                                                                                            <  2:2363774/150‑1 (MQ=255)
          cTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCg                                                                                                                                            <  1:7490213/150‑1 (MQ=255)
          agtttgccggggtcgaaccgcagtggttcgccgaggcggcttatccgcgtgtgcggagctggctggaggggtggctggcttcggagttgttcaaggcaatcatggtccgctgattaaacatcgggctgcacataGGTCCTTGTGGGAGCg                                                                                                                                            >  2:8551591‑M1/135‑150 (MQ=255)
           tGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCgg                                                                                                                                           <  1:4315207/150‑1 (MQ=255)
           tGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCgg                                                                                                                                           <  1:2521042/150‑1 (MQ=255)
           tGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCgg                                                                                                                                           <  1:623888/150‑1 (MQ=255)
            gCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCggg                                                                                                                                          <  2:3578426/150‑1 (MQ=255)
            gCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCggg                                                                                                                                          <  1:6279338/150‑1 (MQ=255)
             ccAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGc                                                                                                                                         >  1:4799505/1‑150 (MQ=255)
             ccAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGc                                                                                                                                         >  2:6888900/1‑150 (MQ=255)
              cAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGcc                                                                                                                                        >  1:5583058/1‑149 (MQ=255)
              cAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCa                                                                                                                                        >  1:2266158/1‑150 (MQ=255)
                    atgcccatgccGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCcg                                                                                                                                  >  1:3855798/1‑150 (MQ=255)
                     tgcccatgccGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCcgc                                                                                                                                 <  2:2990430/150‑1 (MQ=255)
                           tgccGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAacac                                                                                                                           >  2:3677493/1‑150 (MQ=255)
                              cGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCgg                                                                                                                        <  1:8942700/150‑1 (MQ=255)
                               gACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGc                                                                                                                       >  1:7771135/1‑150 (MQ=255)
                                  agcagcAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCaga                                                                                                                    <  1:5854816/150‑1 (MQ=255)
                                  agcagcAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCaga                                                                                                                    <  1:8653352/150‑1 (MQ=255)
                                      gcaAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCg                                                                                                                <  1:1075196/150‑1 (MQ=255)
                                      gcaAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCg                                                                                                                <  1:1389224/150‑1 (MQ=255)
                                      gcaAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCg                                                                                                                <  2:7195756/150‑1 (MQ=255)
                                         aGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTg                                                                                                             <  1:3244690/150‑1 (MQ=255)
                                          ggCTTCTGCCACCCACAGCTACACCGCGCAGTACCTGCGCCAGCGCGCAAATTTCCTGGCGGCCCTGAGTGGCAAGCACCACCACTGATGGGGCTTGTGTGAGGTCCTTGGGGGAGGGGGCATGCCCGCGAACACCGGCTCTGCCGGTgt                                                                                                            <  1:219628/150‑2 (MQ=255)
                                          ggCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCg                                                                                                                         <  2:143216/137‑1 (MQ=255)
                                          ggCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGc                                                                                                            >  2:6003474/1‑150 (MQ=255)
                                          ggCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGc                                                                                                            <  2:6586542/150‑1 (MQ=255)
                                            cTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCa                                                                                                          <  2:2328643/150‑1 (MQ=255)
                                             ttCTGCCACCCACAGCTACACCGAGCAGAACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCAt                                                                                                         >  2:644246/1‑150 (MQ=255)
                                                tGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCCTCCa                                                                                                      >  1:4127728/1‑150 (MQ=255)
                                                   cacccacAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACcg                                                                                                   >  2:2746066/1‑150 (MQ=255)
                                                      ccacAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCgg                                                                                                >  2:2972382/1‑150 (MQ=255)
                                                        acaGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTg                                                                                              >  2:4562457/1‑150 (MQ=255)
                                                         cgtgtgcggagctggctggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacatgGGTCCGTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGtgg                                                                                             <  1:1997155‑M1/63‑2 (MQ=255)
                                                         caGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGc                                                                                             <  1:8159809/150‑1 (MQ=255)
                                                          aGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGcc                                                                                            <  2:5458111/150‑1 (MQ=255)
                                                            cTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCg                                                                                          <  2:4167317/150‑1 (MQ=255)
                                                             tACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGc                                                                                         >  2:3276610/1‑150 (MQ=255)
                                                                  cGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTcgc                                                                                    <  2:1885958/150‑1 (MQ=255)
                                                                   gAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTcgcg                                                                                   <  1:8374178/150‑1 (MQ=255)
                                                                   gAGCAGGACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTcgcg                                                                                   <  2:2010917/150‑1 (MQ=255)
                                                                    ctggctggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacatgGGTCCGTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCgg                                                                                  >  1:6819436‑M1/77‑150 (MQ=255)
                                                                    ctggctggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacatgGGTCCGTGTGGGAGCGGGCAGGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCgg                                                                                  >  1:6587703‑M1/77‑150 (MQ=255)
                                                                    aGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCgg                                                                                  <  1:6695201/150‑1 (MQ=255)
                                                                    aGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCgg                                                                                  <  2:7384423/150‑1 (MQ=255)
                                                                    aGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCgg                                                                                  <  2:7961639/150‑1 (MQ=255)
                                                                    aGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGGGCCCGCTTCGCgg                                                                                  <  1:4645271/150‑1 (MQ=255)
                                                                     gCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCggg                                                                                 <  2:9096136/150‑1 (MQ=255)
                                                                      ggctggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacatgGGTCCGTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGTCATCCACCGCGGTGCCCGCTTCGCGGGc                                                                                >  1:1023499‑M1/75‑150 (MQ=255)
                                                                      ggctggagggggggctggcttcggagctgttcaaggcaatcagggtccgctgattaaacatcgggctgcacatgGGTCCGTGTGGGAGCGGGCAGGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGc                                                                                >  1:4808352‑M1/75‑150 (MQ=255)
                                                                       gctggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacatgGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGGGCCCGCTTCGCGGGCa                                                                               >  2:6099141‑M1/74‑150 (MQ=255)
                                                                        gTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCTGTGCCTTCCACCTCGGTGCCCGCTTCGCGGGCAT                                                                              <  2:1638679‑M1/150‑1 (MQ=255)
                                                                        gTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCAT                                                                              <  2:4534464‑M1/150‑1 (MQ=255)
                                                                        ctggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacatgGGTCCGTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCAt                                                                              >  2:1526349‑M1/73‑150 (MQ=255)
                                                                        ctggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacataGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCAt                                                                              >  2:4276181‑M1/73‑150 (MQ=255)
                                                                          ggaggggtggctggcttcggagctgttcaaggcaatcatggtccgctgattaaacatcgggctgcacataGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGc                                                                            >  2:4362721‑M1/71‑150 (MQ=255)
                                                                             tGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCCTCCACCGCGGTGCCCGCTGCGCGGGCATGCCCG                                                                         >  2:8801220‑M1/1‑150 (MQ=255)
                                                                             tGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCG                                                                         >  1:2076658‑M1/1‑150 (MQ=255)
                                                                             tGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCG                                                                         >  2:7748734‑M1/1‑150 (MQ=255)
                                                                             tGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATG‑CCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCCTGCCCGC                                                                        >  2:2516010‑M1/1‑150 (MQ=255)
                                                                                        cttcggagctgtttaaggcaatcatggtccgctgattaaacatcgggctgcacatgGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACgg                                                              >  2:3924441‑M1/57‑150 (MQ=255)
                                                                                          cAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGAc                                                            <  2:8179417/150‑1 (MQ=255)
                                                                                           aaTTTCCATGGGGGGCTGAGTGGCAAGCACCACCACTGATCTGGGTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGGCCGGTTGGCGGGGATGCGCGGTGCCACACGGagc                                                           >  2:3805784/1‑148 (MQ=25)
                                                                                            aTTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCGTCGCGGGCATGCCCGCTCCCACACGGAccc                                                          >  1:1228219/1‑150 (MQ=255)
                                                                                                  aTGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCAAGCCCGCTCCCCCACGGACCCATGTGc                                                    >  2:5378561/1‑150 (MQ=255)
                                                                                                     cGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCCCGTCGCGGGCAAGCCCGCTCCCACACGGACCCCAGTGCAGc                                                 >  1:1795029/1‑150 (MQ=37)
                                                                                                           tgtgTGGCAAGCACCACCCCTGATCTGGCTTGTGTGAGGTCGTTGTGGGAGCGGGCTTGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGGGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATg                                           <  2:3368389/147‑1 (MQ=37)
                                                                                                            gAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCCTGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGt                                          >  2:1115715/1‑150 (MQ=255)
                                                                                                                 gCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCGTCGCGGGCAGGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAAt                                     >  2:6327722/1‑150 (MQ=255)
                                                                                                                     gCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGGCCGCTTCGCGGGCCTGCCCGCGCCCACACCGTCCCAATTGCAGCCCGAATTTTAATAAGc                                 >  1:1922464/1‑150 (MQ=25)
                                                                                                                     gCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACAAGGACCCATGTGAAGCCCGATGTTTAATCAGc                                 >  1:7409010/1‑150 (MQ=255)
                                                                                                                     gCACCACCACTGATCGGGGTTGTGTGAGGTCCTTGTGGGAGGGGGCATGCCCGCTAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGc                                 <  1:3586321/150‑1 (MQ=255)
                                                                                                                      caccaccacTTATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCTGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCg                                <  2:6974318/150‑1 (MQ=255)
                                                                                                                       accaccacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCAAGTGCAGCCCGAAGTTTAATCAGCgg                               >  1:8210725/1‑150 (MQ=255)
                                                                                                                        ccaccacTGATCTGGCTTGTGTGAGGTCCTGGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGa                              <  2:7540129/150‑1 (MQ=255)
                                                                                                                         caccacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGAc                             >  2:553324/1‑150 (MQ=255)
                                                                                                                         caccacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACCGACCCAAGTGCAGCCCGATGTTTAATCAGCGGAc                             >  1:2980774/1‑150 (MQ=255)
                                                                                                                         caccacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCATCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCCGCCCGAGGTTTAATCAGCGGAc                             >  2:8439601/1‑150 (MQ=255)
                                                                                                                         caccacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCCCGTCGCGGGCCTGCCCCCGCCCCCACCGCCCCAAGTGCACCCCCAAGGTTAAACAGCGGAc                             >  1:284416/1‑150 (MQ=25)
                                                                                                                          accacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCGTCGCGGGCATGCCCCCGCCCACCCCGACCCAAGTGCAGCCCGATGTTTAATCAGCGGAcc                            >  1:1634851/1‑150 (MQ=37)
                                                                                                                            cacTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCCCTTCGCGGGCAAGCCCGCACCCACACCGACCCAAGTGCAGCCCCATGTTTAATAAGCGGAccct                          >  1:2703356/1‑148 (MQ=37)
                                                                                                                             acTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATg                         >  2:4747741/1‑150 (MQ=255)
                                                                                                                               tGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCGTCGCCGGCCTGCCCCCTACCACACGGACCCAATTGCCGCCCCAAGTTTAATAAGCGGACCATGAt                       >  1:7136391/1‑150 (MQ=25)
                                                                                                                                      gCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCGTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCCGCCCGATGTTTAAACAGCGGACCCAGATTGCCTTg                >  1:2993216/1‑150 (MQ=37)
                                                                                                                                        ttGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATAAGCGGACCATGATTGCCTTGaa              >  1:1439591/1‑150 (MQ=255)
                                                                                                                                        ttGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCGTCGCGGGCCAGCCCCCGCCCCCACCGACCCAAGTGCAGCCCCAAGTTTAAACAGCCGCCCAAGATTTccattaa              >  1:8615441/1‑145 (MQ=21)
                                                                                                                                        ttGTGGGTGGTCCTTGGGGGAGGGGGCAGGCCCGCGAACCCCGGCCGCGCCGGGGCCATCCCCCGCGGGGCCCGCTTCGCGGGCTGCCCCGCACCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGaa              <  1:5454265/150‑1 (MQ=255)
                                                                                                                                          gtgtgtGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACa            <  1:9100992/150‑1 (MQ=255)
                                                                                                                                          gtgtgAGGTCCTTGTGGGAGCTGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCCCGTCGCGGGCAATCCCCCTCCCACACCGACCCAAGTGCAGCCCCATGTTTAATAAGCGGACCAAGATTTCCTTGAACa            >  1:8451249/1‑150 (MQ=25)
                                                                                                                                              gAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGGGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTc        <  2:5255037/150‑1 (MQ=255)
                                                                                                                                                    CTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGc                                                                                         >  1:3683217‑M1/1‑63 (MQ=255)
                                                                                                                                                    CTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCGTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGc  <  2:6272749‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
ATCGGTCGTACTGCCAGCGCATGCCCATGCCGACAGCAGCAAGGCTTCTGCCACCCACAGCTACACCGAGCAGTACCTGCGCCAGAGCGCCAATTTCCATGCGGCCCTGAGTGGCAAGCACCACCACTGATCTGGCTTGTGTGAGGTCCTTGTGGGAGCGGGCATGCCCGCGAACACCGGCAGAGCCGGTGCCATCCACCGCGGTGCCCGCTTCGCGGGCATGCCCGCTCCCACACGGACCCATGTGCAGCCCGATGTTTAATCAGCGGACCATGATTGCCTTGAACAGCTCCGAAGC  >  NC_002947/2297590‑2297887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑