| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,414,841 | G→C | 7.3% | intergenic (+140/‑281) | rlmM → / → PP_2114 | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,414,841 | 0 | G | C | 7.3% | 648.5 / 33.0 | 205 | intergenic (+140/‑281) | rlmM/PP_2114 | 23S rRNA (cytidine(2498)‑2'‑O)‑methyltransferase RlmM/transposase |
| Reads supporting (aligned to +/- strand): ref base G (99/91); new base C (12/3); total (111/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.69e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.11e-01 | |||||||||||
Only 100 of 215 total aligned reads displayed.
GCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACA > NC_002947/2414692‑2414990 | gCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTGAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATg > 1:2378377/1‑150 (MQ=255)gCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATg > 1:6055953/1‑150 (MQ=255) ccACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATgg < 2:4247727/150‑1 (MQ=255) ccACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATgg > 1:4406228/1‑150 (MQ=255) ccACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATgg > 1:417998/1‑150 (MQ=255) cACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGa > 1:7262426/1‑150 (MQ=255) cACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGa < 1:6329908/150‑1 (MQ=255) cGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATg < 1:5674715/150‑1 (MQ=255) tGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGccc > 2:4458680/1‑150 (MQ=255) aGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATCCATGCCCGt < 1:7012138/150‑1 (MQ=255) ggCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGACATGGATGCCCGTc < 2:2364129/150‑1 (MQ=255) gCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCa < 1:6519227/150‑1 (MQ=255) ccAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATCCATGCCCGTCac < 1:3014972/150‑2 (MQ=255) cAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAg > 1:9101879/1‑150 (MQ=255) cACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAgcgc < 1:1847522/150‑1 (MQ=255) aCGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCt < 1:583176/150‑1 (MQ=255) gtcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a < 2:3846893/150‑1 (MQ=255) gtcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a > 1:6858659/1‑150 (MQ=255) gtcgtTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑a < 2:4687519/150‑1 (MQ=255) ttctgcttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGcc > 2:3943789/1‑150 (MQ=255) ttctgcttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGcc > 1:6599596/1‑150 (MQ=255) ttctgcttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGcc > 2:4109561/1‑150 (MQ=255) ggcgagtcactttttgtcaaccgcgacaaaaagtaaccaaaaaacgctgcgctcccatcatccggcccctgcgctgcgctccggggtcccctcactccGGCCTTGCGGA‑GGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGccc > 2:7925395‑M1/99‑150 (MQ=255) ttctgcGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatgg > 1:5800705/1‑150 (MQ=255) ctgcgtctgcgtCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGTGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggat > 1:5131141/1‑150 (MQ=255) ctgcgtctgcgtCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggat < 2:3223153/150‑1 (MQ=255) gcgtctgcgtctGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatggatgg < 1:3762918/150‑1 (MQ=255) cgtctgcgtctgCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATggg < 1:6210784/150‑1 (MQ=255) cgtctgcgtctgCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATggg < 2:6294146/150‑1 (MQ=255) cgtctgcgtctgCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCAGGGATggg > 1:3058470/1‑150 (MQ=255) gtctgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGAGgggg > 2:6049021/1‑150 (MQ=255) tctgcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGc > 1:3264113/1‑150 (MQ=255) gcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTg < 1:1794080/150‑1 (MQ=255) gcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtc < 1:4729440/150‑2 (MQ=255) gcgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCtc < 2:1999697/150‑2 (MQ=255) cgtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGc < 2:65419/150‑1 (MQ=255) gtctgcTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCtca < 1:9018372/150‑3 (MQ=255) acgcgacaaaaagtaaccaaaaaacgctgcgctcctatcatccggcccctgcgctacgctccggggttccctcgctccGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCatgg < 2:8273847‑M1/57‑1 (MQ=255) cttctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGCAGGCCCCATCCATGGGGCCT‑CAgcgct < 2:1322135/150‑2 (MQ=14) tctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑Ta < 1:1460030/150‑1 (MQ=255) tctgcttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑Ta < 2:2145013/150‑1 (MQ=255) cttTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTcc > 1:7563979/1‑150 (MQ=40) ttttGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTccc > 2:8922519/1‑150 (MQ=40) ttGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCgg < 2:5401562/150‑1 (MQ=38) aagtaaccaaaaaacgctggctcctatcatccggcccctgcgctacgctccggggttccctcgctccGGGCTTGCTCCCGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCgg > 1:1101028‑M1/68‑150 (MQ=255) gCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGa < 2:8095162/150‑1 (MQ=37) ccaaaaaacgctggctcctatcatccggcccctgcgctacgctccgggggtccctcgctccGGGCTTGCTCCCGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCaa > 1:6046528‑M1/62‑150 (MQ=255) aaaaaacgctgcgctcccatcatccggcccctgcgctgcgctccggggtcccctcactccGGCCTTGCGAA‑GGCAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCA‑GGATGGGGCCTTCGGCGCGGTCCTGCCGGGAGCAAg > 2:146547‑M1/61‑150 (MQ=255) ttCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGccc > 1:8196240/1‑150 (MQ=37) ttCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGccc > 2:2562942/1‑150 (MQ=37) accgtcggctcccatcatccggcccctacgctacgctccggggtcccctcactctGGGCTTGCGGA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGa > 1:2968202‑M1/56‑150 (MQ=255) tAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGa < 1:368202/150‑1 (MQ=38) gcgcgcGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGAGCG‑TACTCCCGGGAGCAAGCCCGGAGCg < 1:378945/150‑1 (MQ=38) tggctcctatcatccggcccctgcgctacgctccggggttccctcgctcgGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑‑GGCCCCA‑GGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCGGAGCGAg > 2:4657222‑M1/51‑150 (MQ=255) gcgcgATAGTTGAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGTA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAg < 2:3498168/150‑1 (MQ=21) cgcgATCGTTCCGGCGCCGCAGATTGCGACTTCAGGAGGCCGAGCGTCGGGCTTGCGAA‑GGGAGGTGACGGGCATGGAGGCCCGTCAAGCGCTG‑AGGCCCCAGGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAgg < 2:3055385/150‑1 (MQ=11) cgcgATCGTTCCGGCGACGCAGATTGCGACTTCCGGTGGCCGCGCGTTGGGCTTGGGAC‑GGGAGGTGACGGGCTTGGATGCCCGTCAAGCGCTG‑TGGCCCCATGGATGGGGCCTGCTGCGCT‑TCCTCCCGGGAGCAAGCCCGGAGCGAgg < 2:1548737/150‑1 (MQ=11) gcgATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAggg > 1:84759/1‑150 (MQ=37) tCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCgg > 1:8937490/1‑150 (MQ=37) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTa < 2:4406228/150‑1 (MQ=37) gACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTa < 2:2637519/150‑1 (MQ=37) cGCAGATTGCGACTTCCGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCCTGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAgc < 2:5053984/150‑1 (MQ=255) gCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAgcg > 2:8292273/1‑150 (MQ=37) cttttGCGACTCCTGGTGGCCGAGCTTTGGGCTTGCGTT‑GGGTGGTGAGGGGCATGGTTGCCCGTCATGCGCTG‑CGGCCCCCTGTTTGGGGCCTGCAGCGCT‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCa < 2:281389/147‑1 (MQ=11) aGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATCCATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGACCCCCGGAGCGTAGCGCa > 1:1584807/1‑150 (MQ=255) aTTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGTGGTGACGGGCATGGAGGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAgg < 1:8344069/150‑1 (MQ=255) tGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAgggg > 2:1831681/1‑150 (MQ=37) gACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCg > 1:7450712/1‑150 (MQ=37) ttCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgat > 1:7187504/1‑150 (MQ=37) aggaggCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgatgat > 1:6270408/1‑150 (MQ=37) aggaggCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGgatgat > 2:1063523/1‑150 (MQ=37) ggaggCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATa < 2:7285620/150‑1 (MQ=38) aggCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAgg < 2:6858659/150‑1 (MQ=37) ggCCGAGCGTAGGGCTTGCGAC‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGa < 2:7462847/150‑1 (MQ=37) ggCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGa < 2:3743964/150‑1 (MQ=37) ccGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAga > 1:1030845/1‑149 (MQ=37) GGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttt < 1:7777185‑M1/150‑1 (MQ=255) GGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttt < 2:7163729‑M1/150‑1 (MQ=255) ggtggCGAG‑GGGTGGTGCGGGGCTTGGCGGCCCGCCACGCGCGG‑CGGCCCCTTGGTGGGGGCCGGCCGCGCG‑TACCCCGGGGACCACGCCGGGGGCGCGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGttttt < 1:5553562/146‑1 (MQ=9) CTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGACCCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttttt < 2:6213800‑M1/150‑1 (MQ=255) CTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGtttttt > 2:5243701‑M1/1‑150 (MQ=255) TTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGTATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTg > 2:5784564‑M1/1‑150 (MQ=255) TTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTg > 2:8024262‑M1/1‑150 (MQ=255) gacgggAGGTGACGGGCATGGATGCCCGTCACGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTa < 2:8572971/147‑1 (MQ=255) gggAGGTGACGGGCAGGGATGCCCGCCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCACGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACtt < 2:7828923/150‑1 (MQ=255) ggTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTg > 1:1334605/1‑150 (MQ=39) ttGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGt > 1:6751305/2‑150 (MQ=255) ttGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGt > 1:2445877/2‑150 (MQ=255) ttGACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCAGGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGt > 2:8462255/2‑150 (MQ=255) gACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTcg > 2:2492610/1‑150 (MQ=39) gACGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTcg > 2:5744219/1‑150 (MQ=255) aCGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTcgc > 1:8924422/1‑150 (MQ=255) aCGGGCATCCATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTcgc > 2:2760303/1‑150 (MQ=255) gCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt > 2:8289955/1‑150 (MQ=39) gCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGgtt > 2:6449953/1‑150 (MQ=255) gCATGGATGCCCGACAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGttt < 2:4779137/150‑1 (MQ=255) cATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTg > 2:7699401/1‑150 (MQ=39) cATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTg > 1:6400065/1‑150 (MQ=39) aTGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGa < 2:6065297/150‑1 (MQ=39) ggATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACa > 2:6685467/1‑150 (MQ=39) | GCCACGCTGAGGCCAGCACGTCGTTCTGCTTCTGCGTCTGCGTCTGCTTCTGCTTTTGCTGTTGCTTCTAAGCGCGCGATAGTTCAGGCGACGCAGATTGCGACTTCAGGAGGCCGAGCGTAGGGCTTGCGAA‑GGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑AGGCCCCATGGATGGGGCCTGCAGCGCG‑TACTCCCGGGAGCAAGCCCGGAGCGAGGGAACCCCGGAGCGTAGCGCAGGGGCCGGATGATAGGAGCGCAGCGTTTTTTGGTTACTTTTTGTCGCGTTTGACA > NC_002947/2414692‑2414990 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |