BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,510,754	A→T	9.8%	M109K (ATG→AAG)	PP_2203 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,510,754	0	A	T	9.8%	682.5 / 25.4	256	M109K (ATG→AAG)	PP_2203	hypothetical protein
Reads supporting (aligned to +/- strand): ref base A (153/69); new base T (5/24); total (158/98)
Fisher's exact test for biased strand distribution p-value = 1.12e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 258 total aligned reads displayed.

TGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGACG  >  NC_002947/2510606‑2510903

tGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCAt                                                                                                                                                      <  2:1772120/150‑1 (MQ=255)

    ggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGccc                                                                                                                                                  >  1:6007908/1‑150 (MQ=255)

    ggcACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGccc                                                                                                                                                  >  1:5857182/1‑150 (MQ=255)

       aCCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGc                                                                                                                                               >  1:5122468/1‑150 (MQ=255)

          aaaGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCAcc                                                                                                                                            >  2:8137598/1‑150 (MQ=255)

            aGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCATGCCCATGGGCTCGCCCGGCatgga                                                                                                                                          <  2:3521684/150‑5 (MQ=255)

                  tGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGcc                                                                                                                                    >  2:7695305/1‑150 (MQ=255)

                  tGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGcc                                                                                                                                    >  1:492948/1‑150 (MQ=255)

                     gaAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCtt                                                                                                                                 >  2:3949722/1‑150 (MQ=255)

                        aCAGCGCCCCTCGGCTGAGAATCTGTTGTGGGCGCCCAGGGTGTCCTGGCCAGCCTGGGTCACCCCGATGACCTGGTCGGCATCCTTGTGGTCACCCATCTCCATGCGGGGCGAGCCCTGGGGCTTGCCCGGCACCGCCAGGCCCTTGAg                                                                                                                              <  2:3314069/150‑1 (MQ=255)

                        aCAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAg                                                                                                                              >  2:2470282/1‑150 (MQ=255)

                          aGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGt                                                                                                                            >  1:3062335/1‑150 (MQ=255)

                              ccccTCGGCTGCGAATCAGTTGTGGGCGACCACGGTGTCCTGGCCATCCTGGGACACCCCTATGACCTGGTAGGCATCCTTGGGTTCACCCACCTCCCGGCGGGGCGAGCCCAGGGGCTTGCCCGCCACCGCCAGGCCCTTGAGGTCGtt                                                                                                                        <  1:1463068/150‑1 (MQ=255)

                              ccccTAGGCTTAGAATCAGTAGTTGGCTACCAGGGTGTCCTGGCAATCCTGGGTCACCCCGATGACCTGGTTGGCATCCTTGTGTTCACCCATCTCCATGCCGGGCGAGCCCTTGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGtt                                                                                                                        <  2:4704045/150‑1 (MQ=255)

                               cccTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTg                                                                                                                       >  2:7188360/1‑150 (MQ=255)

                               cccTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTg                                                                                                                       >  2:3137091/1‑150 (MQ=255)

                                ccTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGc                                                                                                                      >  1:2613583/1‑150 (MQ=255)

                                  tAGGCTGCGCATCAGTAGTGGGCGACCACGGTGTCCTGGCCAACCTGGGTCACCCCGCTGACCTGGTAGGCAACCTTGTGGTCACCCATCTCCATGCGGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGt                                                                                                                    <  1:7628111/150‑1 (MQ=255)

                                  tAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTAGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGt                                                                                                                    >  1:8269195/1‑150 (MQ=255)

                                  tAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCATGGGTCACCCCGATGACCTGGTAGGCATCCTAGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGt                                                                                                                    >  1:9097044/1‑150 (MQ=255)

                                    ggCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGttt                                                                                                                  >  1:8813931/1‑150 (MQ=255)

                                     gCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTg                                                                                                                 >  1:3873536/1‑150 (MQ=255)

                                       tGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGTGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTGGAGGTCGTTGCGTTTGGc                                                                                                               >  1:4826403/1‑150 (MQ=255)

                                               tgttgtTGGCTACCTCGGTGTCCTGGCCATCCTGGGTCACCCCTATGACCTGTTAGGAATCCTTGTGTTAACCCTTCTCCATGCCGGGCGAGCCCTTGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGgc                                                                                                       <  2:5040075/146‑1 (MQ=255)

                                                 tttttGGCGACCACGGTGTCGTGGCCATCCTGGGTCACCCCGATCACGTGGTAGGAATCCTTGTGTTCACCATTCTCCATCCCGGGCGTGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGgcgc                                                                                                     <  2:7831753/147‑1 (MQ=255)

                                                    ttGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCAcc                                                                                                  >  1:2443493/1‑150 (MQ=255)

                                                    ttGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCAcc                                                                                                  >  1:6210719/1‑150 (MQ=255)

                                                         gACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTc                                                                                             >  1:4109945/1‑150 (MQ=255)

                                                         gACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTc                                                                                             >  1:556437/1‑150 (MQ=255)

                                                            cACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggc                                                                                          >  1:2269092/1‑150 (MQ=255)

                                                             cgggTGTCGTGGCCATCGTGGGACCCCCCGAGGAGGTGTTTGGCATCCTTGTGGACACCCATCTCCAGGCCGGGCGCGCCCTGGGGCTGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggcc                                                                                         <  2:2269092/148‑1 (MQ=255)

                                                             cgggTGTCCGGGCCACCCGGGGCCCCCCCCTGCCCCGGGTCGGCACCTTTGTGGACCCCAATCCCCTTGCGGGGCGCGCCCCGGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggcc                                                                                         <  1:7091667/148‑1 (MQ=255)

                                                             aCGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggcc                                                                                         <  2:6415348/150‑1 (MQ=255)

                                                             aCGGTGTCCTGGCCATCCTGGGTCACCCCGAGGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggcc                                                                                         <  2:2922637/150‑1 (MQ=255)

                                                               ggTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTCGGCATCCTTGTGGTCACCCCTCTCCATGCCGGGCGAGCCCCTGGGCATGCCCGGCACCGCCAGGCCCGTGAGGTCGTGGCGTTTGGCCCGCCGGCGCACCTGCTcggccgg                                                                                       >  2:292169/1‑150 (MQ=255)

                                                                gtgtCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTcggccggc                                                                                      >  2:5595442/1‑150 (MQ=255)

                                                                   tCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACg                                                                                   >  2:1418120/1‑150 (MQ=255)

                                                                     cTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTg                                                                                 >  1:5284454/1‑150 (MQ=255)

                                                                      tGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATACCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                >  1:7419663/1‑150 (MQ=255)

                                                                      gggCCATCCTGGGTCACCCCGATGACCTGGTCGGCATCCTTGTGGTCACCCATCTCCTTGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTgg                                                                                <  1:3608383/149‑1 (MQ=255)

                                                                        gCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCGTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGcc                                                                              >  1:1427314/1‑150 (MQ=255)

                                                                           aTCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCGGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTc                                                                           <  2:4945388/150‑1 (MQ=255)

                                                                             cgtGGGTCACCCCGATGACCTGGTAGGCATCGTTGTGGTCACCCTACACCATGCCGGGCGAGCCCATGGGCATGCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcga                                                                         <  1:6849483/148‑1 (MQ=255)

                                                                             ccggggTCCCCCCGTTGCCCTGGTCGGCAGCCTTGGGGGCACCCCTCGCCCGGCCGGGGGCGCCCCGGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcga                                                                         <  2:5795715/147‑1 (MQ=255)

                                                                              cTGGGTCACCCCGATGACCGGGTCGGCATCGTTGGGGTCACCCATCTCCATGCCGGGCTCGCCCTGGGGCAGGCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTcgac                                                                        <  2:8813931/150‑1 (MQ=255)

                                                                                 ggTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGaa                                                                     >  2:5621976/1‑150 (MQ=255)

                                                                                  gTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAAc                                                                    >  1:5632828/1‑150 (MQ=255)

                                                                                  gTCACCCCGATGACCTGGTAGGCATCCTGGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAAc                                                                    <  2:5110638/150‑1 (MQ=255)

                                                                                         cGATGACGGGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgccgc                                                             <  2:4728744/150‑1 (MQ=255)

                                                                                         ataTGACCTTTTAGCCATCATTGTGGACACCCAACACCACGCCGGGCGAGCCCATGGGAATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTgccgc                                                             <  2:1095364/148‑1 (MQ=255)

                                                                                               ccTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCa                                                       >  1:4010026/1‑150 (MQ=255)

                                                                                               ccTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCa                                                       >  1:8614888/1‑150 (MQ=255)

                                                                                                cTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCAc                                                      >  1:3207461/1‑150 (MQ=255)

                                                                                                 tGGTCGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCTTGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCAcc                                                     <  2:2511573/150‑1 (MQ=255)

                                                                                                 tGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCAcc                                                     >  1:8505910/1‑150 (MQ=255)

                                                                                                 tGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCAcc                                                     >  2:5416566/1‑150 (MQ=255)

                                                                                                       gCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtg                                               >  2:457132/1‑150 (MQ=255)

                                                                                                        cacctttGTGTACACCAAACTCCTTGCGGGGCGCGCCCTTGGGATGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                              <  1:7312054/145‑1 (MQ=255)

                                                                                                        cATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                              <  2:6801661/150‑1 (MQ=255)

                                                                                                        cATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCAGGGGCCGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                              <  2:2060424/150‑1 (MQ=255)

                                                                                                        cATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCAGGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGgtgt                                              <  2:5998025/150‑1 (MQ=255)

                                                                                                          tCCTTGGGGACACCCATCTCCATGCGGGGCGCCCCCTGGGCCAGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTgg                                            <  1:2525911/150‑1 (MQ=255)

                                                                                                           ccTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGc                                           >  2:6627181/1‑150 (MQ=255)

                                                                                                            cTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCa                                          >  2:4233235/1‑150 (MQ=255)

                                                                                                            cTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCa                                          >  2:1495323/1‑150 (MQ=255)

                                                                                                             ttGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCac                                         >  1:2014442/1‑150 (MQ=255)

                                                                                                             ttGTGGACCCCCACCTCCAGCCGGGGCGCGCCCTGGGCCGGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCac                                         <  1:4797876/150‑1 (MQ=255)

                                                                                                               ggggTCACCCATCTCCTGGCCGGGCGAGCCCATGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCacga                                       <  2:7487066/148‑1 (MQ=255)

                                                                                                                tgGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCacgac                                      <  2:2800913/150‑1 (MQ=255)

                                                                                                                tgGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCacgac                                      >  2:1222124/1‑150 (MQ=255)

                                                                                                                    cACCAATCTCCAGGCGGGGCGCGCCCTTGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACACaa                                  <  1:1234462/150‑1 (MQ=255)

                                                                                                                     aCCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCGGGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGACCTTGCCGCCGAGCACCCCGGGGTGGCACGCCGCAAg                                 >  2:7516699/1‑150 (MQ=255)

                                                                                                                       ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                               >  2:7628342/1‑150 (MQ=255)

                                                                                                                       ccATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGc                               >  2:7040422/1‑150 (MQ=255)

                                                                                                                         aTCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGt                             <  2:8386631/150‑1 (MQ=255)

                                                                                                                            tcCTTGCCGGGCGAGCCCTGGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgc                          <  1:8225150/150‑1 (MQ=255)

                                                                                                                            cccAGGCGGGGGGCGCCCTGGGGCCGGCCGGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgc                          <  1:1860947/149‑1 (MQ=255)

                                                                                                                              ggtGCCGGGCATGCCCATGGGCTCGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgcgc                        >  2:5528237/3‑150 (MQ=255)

                                                                                                                              cATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgcgc                        >  1:1088008/1‑150 (MQ=255)

                                                                                                                              cATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgcgc                        >  1:6585462/1‑150 (MQ=255)

                                                                                                                                  ccGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACg                    >  2:5368503/1‑150 (MQ=255)

                                                                                                                                   cGGGCGCGCCCAGGGGCAGCCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGCGTGGCGCCACGCCTTGCGTCGTGCCAcac                   <  1:1396171/150‑3 (MQ=255)

                                                                                                                                    gggCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGcc                  >  1:8742423/1‑150 (MQ=255)

                                                                                                                                      gcttgCCCATGGCCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGa                <  1:2817089/146‑1 (MQ=255)

                                                                                                                                      gcgcccccAGGGGCAGGCCCGCCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGcctt                <  1:3419729/145‑3 (MQ=255)

                                                                                                                                      gCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGa                <  2:8195633/150‑1 (MQ=255)

                                                                                                                                        gAGCCCAGGGGCTTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAgg              <  2:899539/150‑1 (MQ=255)

                                                                                                                                         aGCCCATGGGCTGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTGGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGc             <  2:4863490/150‑1 (MQ=255)

                                                                                                                                         aGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGgcgc                        >  2:8658100/1‑139 (MQ=255)

                                                                                                                                           cccATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGt           >  2:3708193/1‑150 (MQ=255)

                                                                                                                                           cccATGGGCAGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGACCTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGt           <  1:2213743/150‑1 (MQ=255)

                                                                                                                                            ccATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGtt          >  2:7361818/1‑150 (MQ=255)

                                                                                                                                            ccATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGtt          >  2:5904839/1‑150 (MQ=255)

                                                                                                                                              aTGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGGTGc        >  1:6062442/1‑150 (MQ=255)

                                                                                                                                              aTGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGGGGCGCCACGCCGAGGCGTTGc        >  1:461/1‑150 (MQ=255)

                                                                                                                                               tGGGCTGGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCt       <  1:719380/150‑1 (MQ=255)

                                                                                                                                               tGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCt       <  2:7157183/150‑1 (MQ=255)

                                                                                                                                                  gCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGa    >  2:6515832/1‑150 (MQ=255)

                                                                                                                                                    aTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGACg  >  1:2121394/1‑150 (MQ=255)

                                                                                                                                                    aTGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGACg  >  2:8017671/1‑150 (MQ=255)

TGGCGGCACCAAAGGCGCTGAGAAACAGCGCCCCTAGGCTGAGCATCAGTAGTTGGCGACCACGGTGTCCTGGCCATCCTGGGTCACCCCGATGACCTGGTAGGCATCCTTGTGGTCACCCATCTCCATGCCGGGCGAGCCCATGGGCATGCCCGGCACCGCCAGGCCCTTGAGGTCGTTGCGTTTGGCCAGCAGGCGCACCTGCTCGGCCGGCACGTGGCCTTCGACGAACTTGCCGCCGATCACCCCGGTGTGGCACGACGCAAGGCGTGGCGCCACGCCGAGGCGTTGCTTGACG  >  NC_002947/2510606‑2510903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`