| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,665,984 | T→G | 8.0% | intergenic (+44/‑119) | prpC → / → acnA‑II | methylcitrate synthase/aconitate hydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,665,984 | 0 | T | G | 8.0% | 385.0 / 2.2 | 145 | intergenic (+44/‑119) | prpC/acnA‑II | methylcitrate synthase/aconitate hydratase |
| Reads supporting (aligned to +/- strand): ref base T (37/92); new base G (8/7); total (45/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.50e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 150 total aligned reads displayed.
GGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTG > NC_002947/2665835‑2666129 | ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGt < 2:559402/150‑1 (MQ=255)ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGt < 1:7482527/150‑1 (MQ=255)ggcggcGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGt < 1:7482716/150‑1 (MQ=255) gcACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGGGGGccggg > 1:8591650/1‑147 (MQ=255) aCGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGa < 2:3926932/150‑1 (MQ=255) aCGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGa < 2:7421817/150‑1 (MQ=255) aCGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGa < 2:1795281/150‑1 (MQ=255) aCGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGa < 2:2803296/150‑1 (MQ=255) cGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGaa < 2:6188113/150‑1 (MQ=255) gTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAt < 1:1320739/150‑1 (MQ=255) gTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAt < 1:5572434/150‑1 (MQ=255) gTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAt < 2:1906492/150‑1 (MQ=255) gTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAt < 1:1929621/150‑1 (MQ=255) gTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCACGCCcgctccc < 2:2308772/150‑5 (MQ=255) tCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATg < 1:1995944/150‑1 (MQ=255) ttCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGGCcgcgcctgcc > 1:4445768/1‑144 (MQ=255) ttCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGCATG‑Ca > 2:5898165/1‑150 (MQ=255) ttCGAGAAGCGCGCCAATAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑Ca > 2:21433/1‑150 (MQ=255) cGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CAcc > 2:3555598/1‑150 (MQ=255) gAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CAccc < 1:11722/150‑1 (MQ=255) gAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CAccc < 1:6734740/150‑1 (MQ=255) gAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCCCGACAG‑CAccc > 2:4585387/1‑150 (MQ=255) agcagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGACTG‑CGCCCg > 1:3756783/1‑150 (MQ=255) agcagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCg < 2:7600335/150‑1 (MQ=255) agcagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCg < 2:7600028/150‑1 (MQ=255) cagcGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGc < 2:3847703/150‑1 (MQ=255) gcgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCt < 2:5091291/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCtt < 2:7812378/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCtt < 1:1410184/150‑1 (MQ=255) cgcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCtt < 1:4663157/150‑1 (MQ=255) gcgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTg < 1:3650937/150‑1 (MQ=255) cgcCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGt < 2:7082546/150‑1 (MQ=255) ccAACACCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCCGATCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCtcgcac < 1:3277725/150‑6 (MQ=255) caacaaCCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAAc < 2:6746638/150‑1 (MQ=255) aacaacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGGAAG‑CACCCCGCCGTGTAAcc > 2:4082180/1‑150 (MQ=255) acaacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCa < 2:1527186/150‑1 (MQ=255) caacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCAc < 1:3138537/150‑1 (MQ=255) caacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCAc < 1:3555598/150‑1 (MQ=255) aacCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGGCCCCGAATG‑CACCCGGCCGTGGAACCAca > 1:9000650/1‑149 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTCTAGAGATGCTACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CTCCCGGCCTTGTAACCACtgt < 1:6057594/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtgt < 2:2921227/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtgt < 2:2921236/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtgt < 1:21433/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtgt < 1:467126/150‑1 (MQ=255) ccGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtgt < 2:4318964/150‑1 (MQ=255) cGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGGGCCCGCGAATG‑CACCCCGCCTTGTAACCACtggg > 2:4395944/1‑148 (MQ=255) tcCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACctgc < 1:5654730/150‑1 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgcg < 2:2720219/150‑1 (MQ=255) cGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGGGCCCGCGCATG‑CACCCCGCCATGTAACCACAGTGCACCAGCGGACGCCATcgcg > 2:585936/1‑150 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTcgctg < 1:1845741/150‑3 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:1650452/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:446370/150‑1 (MQ=255) gAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCATTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:5259069/150‑1 (MQ=255) gAGCATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:5259365/150‑1 (MQ=255) tATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCCCGAATG‑CACCCCGCCGGGTAAACACAGTGCAACAGCAGACGCATAAGCGGGCa > 2:5000623/1‑150 (MQ=255) gTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCCGCCGTGTAACCACTGTGCACCGGCTGACGCATTCGCGGGCACGc > 2:5135416/1‑150 (MQ=255) tCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg > 2:8473131/1‑143 (MQ=255) tCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCgg < 1:8473131/143‑1 (MQ=255) cGGCGTCGAACAGCGCCAGTTCGTGCCTATCGTGCTGCGCTTAATATCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGGGGGCGTGCCCGCGAATG‑CACCCGGCCTTTTAACAACTGTGCACCTGCTGACGCATTCGCGGGCACGccc < 1:3884533/150‑1 (MQ=255) ggCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CAACCGGCCTTTTGACCCCAGTGGACCTGAGTACCCAATAGCGGGCACGCCCg > 2:4840679/1‑150 (MQ=255) ggCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGGGGCCCCGCAAG‑CACCCCGGCGTGTAACCACAGTGCCCCGGCGGACCCAATGCCGGGCACccccc > 2:275946/1‑149 (MQ=255) gcggaccAGCGCCAGTTCGTGCCGAGCGAGCAGCGCTGAATAGCTATAGATAGGCACCCCG‑TTGCCCTTTAGGGAGGGGGGGTGCCCGCTAATG‑AACCCGGCCTGTTAACCACTGTGCACCGGCTGACGCTTGCGCGGGCCCGCCCGCTc < 2:7419342/144‑1 (MQ=255) ctaaCAGCGCCTGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTGCCCTTGAGGGAGGGGGCGTGCCCGCTAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCTTTCGCGGGCACGCCCGCTccc < 2:5960960/148‑1 (MQ=255) aCAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGGGTGGCCGCGGATG‑GACCCGGCCGTGGGACCACTGTGCGCCAGCAGGCGCCGTCGCGGGCACGCCCCCGCCcaca > 1:5951321/1‑150 (MQ=255) cAGCGCCTGTTCGTGCCTATGTCGCTGCGCTGAATTGCTATTGAGTGGAAACCGG‑TTTCCTTTGTGGTTGGGGGCGTGCCCGCGATTG‑CACCGGCCCTTTTAACCACTGTGCACGTGCGCACGCATTGGGGGGCACGCCCGCTCCCACAg < 2:3537168/150‑1 (MQ=255) cgcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCGTGTAAACACAGTGCACCAGCGGCCGCATTCGCGGGCCCCCCCGCGcccccccgta > 1:9086498/1‑143 (MQ=255) gcCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCATTGAGGGAGCGGGCGGGGCCGCGAGTT‑AACCCGGGCGGGTAACCAATGTGGAACTGCTGACGCATTGGCGGGCCCGCCCGCGGCCCCAgggtc > 2:4163911/1‑147 (MQ=255) ctgTTCGTGCCTATCGTGCCGCGCTCAATCGCTATAGAGTGCCACCCCG‑TTTCCCTTGCGGGAGCGGGCGGGCCCGCTATTG‑CACCCGGCCTTTTAACCACTTTGAACCTGCTGACGATTTCGGGGCCACGCCCGCTCCCACAGGTACgg < 2:8505168/148‑1 (MQ=255) cAGTCCGTGCGGATCGAGCAGCGCTGAATAGCTATCGCGAGGCAACCGG‑TTTCCCTGGGGGGCGCGGGCGTGCCGGCGAATG‑CACCCGGCCTTGTACCCACTGTGCACCGGGGGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACgg < 2:7200513/150‑1 (MQ=255) ggTGCCGATCGCGCCGCGCTTAATAGCTATCGCGCGGCACCCCG‑TGCCCCTTGCGGGCGCGGGGGTGCCCGCGAATC‑CACCCGGCCTTGCACCCACTGTGCACCGGCTGACGCTTGCGCGGGCACGCCCGCTCCCACAGGTACGGTGaaa < 2:2704999/149‑1 (MQ=255) cgggCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGaaa < 2:8310360/147‑1 (MQ=255) tGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCCCGCATGCCACCCGCCGTGGTAA‑CACAGGGGACCAGCGGAAGCAATAGCGGGCCCCCCCGCGCCCCCAAGGACGGTgggacc > 2:140451/1‑145 (MQ=255) cGATCGCGCAGCGCTTAATAGCTAGCGCGCGGCAACCCG‑TTGCCCTGGAGGGCGGGGGCGTGCCCGCCACTG‑CACCCGCCCTTGAAACCACGGTGAACGTGCTGACGAATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTc < 2:8591650/150‑1 (MQ=255) cGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTGGTAACCACGGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTc < 2:7598302/150‑1 (MQ=255) tttCGAGCAGCGCTCAATTGCTATAGAGTGGAAACCGG‑TTCCCCTTGTGGTTGGGGGGGTCCCCGCTAATG‑CACCCGGCTTTTTAACCACGGTGCACCTGGGGACGAATTGGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTcc < 2:3309908/148‑1 (MQ=255) gATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCGTGTAAACACTGTTCAACTGCTGACGCAATCGCCGGCACGCCCGCTCCCACAGGTACGGGGTAACCTTcc > 2:631981/1‑150 (MQ=255) aTCGAGCAGCGCTGAATAGCGATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAAG‑AAACCGGCCATGTAACCACTGTGCACCAGCTGACGCATTAGCGGGCCCGCCCCCTCCCACAGGGACCGTGTAACCTTCCg > 2:8556018/1‑150 (MQ=255) cGAGCAGCGCTTAATAGCTATCGCGAGCCAACCCG‑TTCCCCTTGCGGGAGCGGGCGTGCCCGCTAATG‑CACCCGGCCTTGAAACCACTGTGCACCTGCTGACGCATTCGCGGCCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGaa < 2:4152334/150‑1 (MQ=255) agcagcGCTGCAGAGCTATCGCGTCGCAACCCG‑TTTCCCTTGTGGGAGCGGGCGGGCCCGCGAATG‑CACCCGGCCTTGTACCCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATc < 2:8962958/150‑1 (MQ=255) cagcGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTACCCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCt < 2:5283648/150‑1 (MQ=255) gcgcTGAATCGCTATCGCGCGGCACCCGG‑TTCCCCTTGCGGGTGGGGGGGGGCCCGCGATTG‑CACCCGGCCTTGTAACCCCTGGGCACCTGCTGACGCATTCGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCtgt < 2:4287308/150‑1 (MQ=255) cgcTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtg < 1:3693731/82‑1 (MQ=255) cgcTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAAAT‑CACCCCGCCGTGTAAAAAACGTGCACCTGCTGAACAATTAGCCGGCCCCCCCCCGCCCCCAGGTACAGTGAAAACATCCCAAtacaggg > 2:3995174/1‑144 (MQ=255) tGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCCCGCAAG‑CACCCCGCCCTGTAACCCCAGTGCCCCAGCGGACGCCAGCGCGGGCACGCCCCCGCCCCCACGGACGGGGACACCATCCGAATCCGGGGAcc > 2:542921/1‑150 (MQ=255) cTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtgt > 2:4204177/1‑73 (MQ=255) cTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACtgt < 1:4204177/73‑1 (MQ=255) cgcggCCACCGG‑TTTCCCTTGCGGGCGCGGGCGTGCCCGCTACTG‑CCCCCGGCCTTGTACCCACGGGGCACCTGCTGACGCTTTCGCGGCCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCa < 1:8394255/147‑1 (MQ=255) gagGCAACCCG‑TTGCCCTTGCGGGAGCGGGCGGGCCCGCGAATG‑CACCCGCCCTTGTACCCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCat < 2:5783716/150‑1 (MQ=255) ggCACCCCG‑TTCCCCTGGCGGGCGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGCACCCACTGTCCACCGGCGCACGCATCCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga < 1:8382523/150‑1 (MQ=255) ggCAACCGG‑TTTCCCTTGTGGGCGGGGGCGTGCCCGCTACGG‑CCCCCGGCCTTGTCACCAGTGTCCACGTGCTGACGCATGCGGGGGCCCGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga < 2:418000/150‑1 (MQ=255) ggCAACCGG‑TGGCCCTTGCGGGCGGGGGCGGGCCCGCGAATG‑CACCCGGCCTGGTACCCACTGTGCACCTGCTGACGCTGTCGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatga < 2:4445768/150‑1 (MQ=255) gCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATT‑CACCCCGCCGTGTGGCCACTGTGCACCAGCAGACGCCTTCGCGGGCACCCCCCCGCCCACACGTACGGTGCAACCGTACGAAACCAGTGACCGAGCCAGATTCCaagat > 2:6659831/1‑150 (MQ=255) gCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCCGCCTTGTAACCACTGTGCCCCAGCTGACGCAATCGCGGGCCCGCCCGCTCCCACAGGTACCGTGAAACCGTCCGAATCCTGTGACCGAGCCGGATTCCatgat > 2:6659828/1‑150 (MQ=255) gcaCCCGTTTTCCTTTGTGGGGGGGGGCGTGCCCGCTTATG‑CACCCGGCGTTGTCACCCGTGGGCACCTGGTGCCGCATGGGGGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCatgat < 2:3256799/148‑1 (MQ=255) ccG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCCGATT‑CAACCCGCCGGGTAACCACCGTGCCCCAGCGGCCGCAGTAGCCGGCACGCCCCCGCCCACACCTACCGGGGAACCCTACCCATACGGTGACCCAGCCCGATTACAAGATGAaca > 2:8843105/1‑150 (MQ=255) g‑TTTCCCTTGTGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTTACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACt < 2:5974662/150‑1 (MQ=255) ttGAGGGAGCGGGCGTGCCCCCCAAAT‑CACCCCGCCGTGTAACCACAGTTCACCTGCTGAAGCAGTAGCGGGGACGCCCGCACCCACACGGACGGTGAAAACATACCAAAACTGTGACCGAGCCAGATTACATGAAGAAAACAGCATaac > 2:6515425/1‑148 (MQ=255) cgCGGGGGGGCCCGCGTCTG‑CCCCCGGCCTGGTAACCACTGGGCACCTGCTGACGCTTTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCa < 2:7537939/149‑1 (MQ=255) gcgggcggGCCCGCGCCGG‑CCCCCGGCCTTGAAACCCCTGGGCCCCTGCCGACGCCTCCGCGGCCCCGCCCGCTCCCACAGGTACGGTGAAACCTTCCGATTCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCAc < 1:646939/150‑1 (MQ=255) ggCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTg > 2:4623179/1‑150 (MQ=255) | GGCGGCGCACGTCTTCGAGCAGCGCGCCAACAACCGCATCATCCGCCCGAGCGCCGAGTATGTCGGCGTCGAACAGCGCCAGTTCGTGCCGATCGAGCAGCGCTGAATAGCTATAGAGAGGCAACCCG‑TTTCCCTTGAGGGAGCGGGCGTGCCCGCGAATG‑CACCCGGCCTTGTAACCACTGTGCACCTGCTGACGCATTCGCGGGCACGCCCGCTCCCACAGGTACGGTGAAACCTTCCGAATCCTGTGACCGAGCCTGATTCCATGATGAACACTGCATACCGCAAGCACCTG > NC_002947/2665835‑2666129 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |