| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,670,046 | C→A | 17.5% | intergenic (+99/‑68) | prpF → / → prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,670,046 | 0 | C | A | 17.5% | 358.9 / 48.3 | 137 | intergenic (+99/‑68) | prpF/prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Reads supporting (aligned to +/- strand): ref base C (59/53); new base A (13/12); total (72/65) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 143 total aligned reads displayed.
CTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACC > NC_002947/2669898‑2670195 | cTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATcc < 2:107173/150‑1 (MQ=255)cTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATcc < 2:2311843/150‑1 (MQ=255) tCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACCGGGTGT‑GAATGCTGTGATATccc > 2:8855358/1‑150 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCt < 2:1684286/150‑1 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCt < 2:1684430/150‑1 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCt < 2:5767420/150‑1 (MQ=255) cgcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCt < 2:874999/150‑1 (MQ=255) gcgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtg < 2:3782190/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtgt < 2:625651/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtgt < 2:5755069/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtgt < 1:3842530/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtgt < 1:3445542/150‑1 (MQ=255) cgTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtgt < 2:4901230/150‑1 (MQ=255) gTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtgtg < 1:8719157/150‑1 (MQ=255) gTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCtgtg < 1:7331163/150‑1 (MQ=255) gCTGATGGAGGGCTGGGGTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGA‑ATCACAGGGTTT‑GAATGCTGGGATATACCTGgggg > 1:2973270/1‑150 (MQ=39) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGa < 2:1468318/150‑1 (MQ=18) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGa < 2:1207065/150‑1 (MQ=18) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGa < 2:1207112/150‑1 (MQ=18) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGa < 2:5222915/150‑1 (MQ=18) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGa < 2:1841683/150‑1 (MQ=18) cTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGa < 2:4304420/150‑1 (MQ=18) gATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCACGAGGGGCCGCTTTGCGGCCCATCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGc < 2:3839522/150‑1 (MQ=255) gATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGc < 2:8342836/150‑1 (MQ=255) gATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGc < 2:5900703/150‑1 (MQ=18) gATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCAAAAGCACCACTCGCGCTCGGCTTCAAGAGGGGCCGCTTTGCAGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGc < 2:4619858/150‑1 (MQ=17) tGGAGGGCTGGGTTCGCGTGCCTGGCGCTAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGCgg < 2:1310739/150‑1 (MQ=18) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCgg < 1:8142900/150‑1 (MQ=255) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCgg < 1:8142914/150‑1 (MQ=255) tGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGCgg < 2:5298316/150‑1 (MQ=18) ggAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCggg < 2:907436/150‑1 (MQ=255) ggAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCggg < 2:907383/150‑1 (MQ=255) gAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCCCAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGCGGGc < 2:6814019/150‑1 (MQ=18) gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 2:2578738/150‑1 (MQ=255) ggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCGCCCCCACGTA‑AACACACGGTTTGGAATG‑TGGGTTATCACGGGGGGAGCGGGCacg > 1:7034878/1‑148 (MQ=255) tGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGccc < 2:4287624/150‑1 (MQ=255) gcgTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGGGGGCGCGGGCAAGCCCGCGAAgg > 2:8451293/1‑150 (MQ=255) tGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGcac > 2:5919184/1‑150 (MQ=255) cTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCCCCGGGA‑ATCACCGGGGTT‑GTATGCGGGGGGATCCCGGGGGGGGCGGGCAAGCCCGCGCAGGGCGGCGCAGCCGcccc > 1:8903177/1‑150 (MQ=255) tCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCgg > 2:4814877/1‑150 (MQ=255) caaaaGCACCACTGGCGCTCGGCTACAAGAGGGGCCGCTTGGCGGCCCTTCGGGGGCTTGCCCGCTCCCACAGTTA‑ACCACAGGTTTT‑GAATGCTGGGATAACCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGc < 2:5500684/148‑1 (MQ=37) aaaGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCCTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACAGGGTTT‑GAATGCTGTTATACCCCGGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGcccttcgcg < 2:2747607/150‑7 (MQ=38) aaGCACCACGGGCGCTCGGCTTCAAGTGGGGCCGCTTGGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACCGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCTAGCCCGCGAAGGGCTGCTGTGCAGcccttcgcgg < 2:7858636/150‑8 (MQ=37) aGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACCGGGTTT‑GAATGCGGTGATATCCCGGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCaaat > 2:1540986/1‑148 (MQ=255) ccacTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTGGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGa < 2:8921123/150‑1 (MQ=255) cacTGGCGCTCGGATTCATGCGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACCGTTA‑ATCACAGGTTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa < 2:2567575/150‑1 (MQ=37) tGGCTCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAggg < 2:5143410/150‑1 (MQ=255) tgggCTTCATGTGGGGCGGCTTTGCGGCCCTTGGCGGGGTTGCCGGCTCCCACTGGTA‑ATCACTGGTTTT‑GAATGCTGTGATTGCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg < 1:9024983/148‑1 (MQ=25) tCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg > 2:7459876/1‑150 (MQ=255) tCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg < 2:7588144/150‑1 (MQ=255) tCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg < 2:7340876/150‑1 (MQ=255) tttagagGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCCATTCTGAAGGGAGCTGGATATGa > 2:3641757/4‑150 (MQ=255) agagGGGCCGCTTTGCGGCCCTTCGCGGGCTTTCCCCCACCCACAGGTA‑ATAACAGGGTTT‑GGATGCTGTGATAAACCTGTGGGAGCGGGCCAGCCCGCGAAGGGCTGCACCGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGGgcg > 2:3185917/1‑150 (MQ=37) cGCTTTGCGGCCCTTCGCGGGCTTTCCCGCACCCAAAGGGA‑ATAACCGGGTTT‑TCATGCGGTGATAAACCTGGGGGTGCCGGCAAACCCGCGAACGGCCGCAAAGAAGCCACCGCCAATGTGTAGGGAGCTGGATATGCTCGcccaactg > 2:4058435/1‑144 (MQ=255) gCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACAGGGTTT‑GAATGCGGGGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCGGCCCAGCCGCCCCGGCACTTCTGAAGGGAGCTGGATATGTGCGCCAACGTAg > 2:6716790/1‑150 (MQ=37) gCTTTGCGGCCCTTCGCGGGCGTGCCCGCTCCCACAGGTA‑AACACAGGGTTT‑GAATGCTGTGATATACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAAATCTGAAGGGAGCTGGATATGAGCGCCAACGTAg > 2:6406397/1‑150 (MQ=255) cTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGAt > 2:9026722/1‑150 (MQ=255) ttCGCGGGCTTGCCCCCACCCCCAGGTA‑ATCACAGGGTTT‑GCATTGTGTGATATACCTGTGGGGGCGGGCAAGCCCGCCGATGGCTGCAAAGCCGCCCCGGCAAATCTGCAGGGAGCTGGATATGAGCGCCAACGGAGACCTCAACGATc > 2:1946305/1‑150 (MQ=255) cgGGCTGGCCCGCTCCCCCCGGTA‑CGCCCAGGGTTT‑GCATGCTGTGATATCCCTGGGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGccc < 1:4475976/150‑1 (MQ=255) gggCTTGCCCGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCACAACGATCGCCCg > 1:7333969/1‑150 (MQ=17) gCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGa > 2:6834373/1‑150 (MQ=255) ttGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGAtt > 1:1326344/1‑150 (MQ=255) cccGCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACg > 1:2837963/1‑150 (MQ=18) ccGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGcccc > 1:4525817/1‑86 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGcccc < 2:4525817/86‑1 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 1:4841155/1‑150 (MQ=255) cagCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TAACTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCACCGGCAATTCTGAAGGGAGCTGGATATGAGCGACAACGAAGACCTCAACGATCGCACGGATTACGa > 2:2740586/3‑150 (MQ=17) gCTCCCACAGGGATATCACAGCATTC‑AAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGAcc > 1:1294990/1‑150 (MQ=18) tCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTATGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg > 1:3083138/1‑150 (MQ=255) acccACCGTTA‑ATCACTGGTTTT‑GATTGGTTTTTTACCCCTGTGGTTGGGGGAAACCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg < 1:8773172/149‑1 (MQ=255) ccACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:3015507/1‑150 (MQ=255) ccACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:6670781/1‑150 (MQ=255) acaGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGccc > 1:2697831/1‑133 (MQ=255) acaGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGccc < 2:2697831/133‑1 (MQ=255) acaGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGc > 2:6427687/1‑150 (MQ=255) gTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACa > 1:5521444/1‑150 (MQ=255) cactGGGTTT‑GAATGCTGTGATTTCCCTGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAAccc < 2:831733/150‑1 (MQ=255) cacaGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAAccc > 1:2364869/1‑150 (MQ=255) acaGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 1:7060944/1‑150 (MQ=255) acaGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 2:4551572/1‑150 (MQ=255) acaGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCAGGTGCTACAAACCCt > 1:1980654/1‑150 (MQ=255) caGGGTTT‑GAATGCTGTGATATCCCTGTGTGATCGGGCAAGCCCGCGAAGGGCTGCACATCAGACACGGCAAATATGAAGTGAGCTGGATATGAGCGCCAACGTAGACATCAACGAACGCCCGGATTACTAACGGGTGCTACAAACCCTg > 1:1286945/1‑150 (MQ=255) caGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg > 2:7914685/1‑150 (MQ=255) cgggTTC‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg < 2:3538806/149‑1 (MQ=255) aGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGGGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 1:7107797/1‑150 (MQ=255) aGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 1:1795618/1‑150 (MQ=255) ggTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGcc > 1:4263329/1‑150 (MQ=255) ttt‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGa > 1:9135824/1‑150 (MQ=255) cTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTATACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGccc > 1:3765038/1‑150 (MQ=255) cTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGccc > 2:4422082/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:4984221/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:4487259/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:5042791/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:6073919/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:7283762/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:7086417/1‑150 (MQ=255) gtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTTCGCCCTc > 2:4644898/1‑150 (MQ=255) tgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCg > 1:8826126/1‑150 (MQ=255) tCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTAc > 2:1210144/1‑150 (MQ=255) cccTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTAcc > 2:1518878/1‑150 (MQ=255) | CTCGCGTGCTGATGGAGGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTT‑GAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACC > NC_002947/2669898‑2670195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |