| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,670,063 | A→T | 7.0% | intergenic (+116/‑51) | prpF → / → prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,670,063 | 0 | A | T | 7.0% | 378.0 / 14.1 | 134 | intergenic (+116/‑51) | prpF/prpD | aconitate isomerase/2‑methylcitrate dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (88/34); new base T (8/2); total (96/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.27e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.46e-01 | |||||||||||
Only 100 of 139 total aligned reads displayed.
GGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCCGCGA > NC_002947/2669914‑2670211 | gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 2:2913745/150‑1 (MQ=255)gggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCaa < 2:2578738/150‑1 (MQ=255) ggCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAg < 1:4693896/150‑1 (MQ=255) tGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGGTATCCCTGTGGGAGCGGGCAAGccc > 2:1273294/1‑150 (MQ=255) gcgTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGGGGGCGCGGGCAAGCCCGCGAAgg > 2:8451293/1‑150 (MQ=255) tGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGcac > 2:5919184/1‑150 (MQ=255) gctAGCTTCTACAGCACAAGTGGCGCTCGGCTTCCAGAGGGGCCGCTTTGCTCCCATTGGCGGGATTCACCGCTCCGACAGTTA‑ACCCATGTGTTTGATTGCTGTTATATACCTGGGGTAGCGGTCATGCCCGCGAAGGGCTGCAcagca < 2:7406123/148‑1 (MQ=255) aTAGCTTCTAACGCACCACTGGCGCTCGGCTTCAAGAGGGGCGGCTTGGCGGCCCTTCGCGGGCTGGCCCGCTCCCCCAGGTA‑ATCACTGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCAcagcag < 2:6557346/150‑1 (MQ=38) cTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCCCCGGGA‑ATCACCGGGGTTGTATGCGGGGGGATCCCGGGGGGGGCGGGCAAGCCCGCGCAGGGCGGCGCAGCCGcccc > 1:8903177/1‑150 (MQ=255) gccgaGCGCCAGTGGTGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCACCCACAGGTA‑ATAACAGGGTTTGAATTCTGTGATATCCCAGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGc > 2:190250/5‑150 (MQ=37) aaaGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCCTCGCGGGCTTGCCCGCTCCCACCGGTA‑ATCACAGGGTTTGAATGCTGTTATACCCCGGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGcccttcgcg < 2:2747607/150‑7 (MQ=38) aaGCACCAGTGGCGCTCGGCTACAGGAGGGGCCGCTTGGCGGCCCTGCGGGGGGTTGCCCGCTCCCACTGGTA‑ATCACTGGGTTGGAAGGCTGTTATATCCGTGTGGGTGCGGGCAAGCCCGCGAAGGGCTGCTGTGCAGcccttcgcgg < 2:7858575/150‑8 (MQ=255) aGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACCGGGTTTGAATGCGGTGATATCCCGGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCaaat > 2:1540986/1‑148 (MQ=255) cccgggggcTGGGCTTCACGCGGGGCCGGTTTGGGGCCCTGGGGGGGCTTGCCCGCGCCCACGGTTA‑AGCCCTGGGTTTGTTTGCTGTTTTTTCCCTGTGGGCGGGGGAACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGaa < 2:2566853/143‑1 (MQ=255) tGGCTCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAggg < 2:5143410/150‑1 (MQ=255) tgggCTTCATGTGGGGCGGCTTTGCGGCCCTTGGCGGGGTTGCCGGCTCCCACTGGTA‑ATCACTGGTTTTGAATGCTGTGATTGCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg < 1:9024983/148‑1 (MQ=25) tCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTgg > 2:7459876/1‑150 (MQ=255) tttagagGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCCATTCTGAAGGGAGCTGGATATGa > 2:3641757/4‑150 (MQ=255) atgcggggCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCCCCCACAGTAA‑ATAACCGGTTTTGATTGCTGTCATATCCCGGGGGGCGGGGGCACGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAgc < 1:4466228/146‑1 (MQ=255) aatagGGGCAGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑AAAAAAGGGTTAGAATGCGGTGATATCCCTGTGGGACCCGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAgc > 2:5175912/4‑150 (MQ=37) agagGGGCCGCTTTGCGGCCCTTCGCGGGCTTTCCCCCACCCACAGGTA‑ATAACAGGGTTTGGATGCTGTGATAAACCTGTGGGAGCGGGCCAGCCCGCGAAGGGCTGCACCGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGGgcg > 2:3185917/1‑150 (MQ=37) ggggCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGTTTTGATTGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCa < 2:562817/150‑1 (MQ=255) gCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑AACACAGGGTTTGAATGCTGTGATATCCCGGTGGGAGCGGGCAAGCCCGCGAAGGGCGGCACCGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACg > 2:4917513/1‑150 (MQ=255) cGCTTTGCGGCCCTTCGCGGGCTTTCCCGCACCCAAAGGGA‑ATAACCGGGTTTTCATGCGGTGATAAACCTGGGGGTGCCGGCAAACCCGCGAACGGCCGCAAAGAAGCCACCGCCAATGTGTAGGGAGCTGGATATGCTCGcccaactg > 2:4058435/1‑144 (MQ=255) gCTTTGCGGCCCTTCGCGGGCGTGCCCGCTCCCACAGGTA‑AACACAGGGTTTGAATGCTGTGATATACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAAATCTGAAGGGAGCTGGATATGAGCGCCAACGTAg > 2:6406397/1‑150 (MQ=255) cTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGAt > 2:9026722/1‑150 (MQ=255) ttCGCGGGCTTGCCCCCACCCCCAGGTA‑ATCACAGGGTTTGCATTGTGTGATATACCTGTGGGGGCGGGCAAGCCCGCCGATGGCTGCAAAGCCGCCCCGGCAAATCTGCAGGGAGCTGGATATGAGCGCCAACGGAGACCTCAACGATc > 2:1946305/1‑150 (MQ=255) gggCTTGCCCGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCg > 1:2800268/1‑150 (MQ=17) gCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGa > 1:817257/1‑150 (MQ=255) gCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGa > 2:6834373/1‑150 (MQ=255) gCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGa > 2:705014/1‑150 (MQ=255) ttGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGAtt > 1:1326344/1‑150 (MQ=255) tGCCCGCTCCCACAGGTA‑ACCACCGGGTTTGAATGCTGTGATATCCCTGGGGGCGGGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTa < 1:2210728/150‑1 (MQ=255) cccGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACg > 1:2837963/1‑150 (MQ=18) ccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGcccc < 2:4525817/86‑1 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGcccc > 1:4525817/1‑86 (MQ=255) ccGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 1:4841155/1‑150 (MQ=255) ccGCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGa > 2:6774989/1‑150 (MQ=18) cagCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TAACTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCACCGGCAATTCTGAAGGGAGCTGGATATGAGCGACAACGAAGACCTCAACGATCGCACGGATTACGa > 2:2740586/3‑150 (MQ=17) gCTCCCACAGGGATATCACAGCATTCAAACCCTGTGAT‑TACCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGAcc > 1:1294990/1‑150 (MQ=18) tCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg > 2:1616541/1‑150 (MQ=255) acccACCGTTA‑ATCACTGGTTTTGATTGGTTTTTTACCCCTGTGGTTGGGGGAAACCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCgg < 1:8773172/149‑1 (MQ=255) ccACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGt > 2:6670781/1‑150 (MQ=255) acaGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGccc > 1:2697831/1‑133 (MQ=255) cggTA‑CTCACAGGGTTTGAAGGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTa < 2:8903177/149‑1 (MQ=255) gTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACa > 1:5521444/1‑150 (MQ=255) cactGGGTTTGAATGCTGTGATTTCCCTGTGGGCGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAAccc < 2:831733/150‑1 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 2:4551572/1‑150 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 2:2678249/1‑150 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCt > 1:7060944/1‑150 (MQ=255) acaGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCAGGTGCTACAAACCCt > 1:1980654/1‑150 (MQ=255) ccgggTTTTAATGCTGTGATATCCCTGGGGGTGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg < 2:1206670/148‑1 (MQ=255) caGGGTTTGAATGCTGTGATATCCCTGTGTGATCGGGCAAGCCCGCGAAGGGCTGCACATCAGACACGGCAAATATGAAGTGAGCTGGATATGAGCGCCAACGTAGACATCAACGAACGCCCGGATTACTAACGGGTGCTACAAACCCTg > 1:1286945/1‑150 (MQ=255) caGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGTTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg > 2:4344846/1‑150 (MQ=255) caGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg < 2:5795093/150‑1 (MQ=255) caGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTg > 2:7914685/1‑150 (MQ=255) cgggTTCGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg < 2:3538806/149‑1 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGGGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 1:7107797/1‑150 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 1:1795618/1‑150 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 1:7174036/1‑150 (MQ=255) aGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTgg > 1:7520399/1‑150 (MQ=255) ggTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGcc > 1:4263329/1‑150 (MQ=255) gTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCg > 2:4225152/1‑150 (MQ=255) tttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGctcg > 2:9072239/1‑147 (MQ=255) tttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGa < 2:3191391/150‑1 (MQ=255) tttGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGa > 1:9135824/1‑150 (MQ=255) gCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGcc > 1:6334150/1‑150 (MQ=255) cTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTATACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGccc > 1:3765038/1‑150 (MQ=255) cTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGccc > 2:4422082/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:4984221/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 2:7283762/1‑150 (MQ=255) tgtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCt > 1:4487259/1‑150 (MQ=255) gtgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTTCGCCCTc > 2:4644898/1‑150 (MQ=255) tgATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCg > 1:8826126/1‑150 (MQ=255) cccTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTAcc > 2:1518822/1‑150 (MQ=255) ccggtgGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCg < 1:5919184/147‑1 (MQ=255) ccTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCg > 1:2055467/1‑150 (MQ=255) cTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCgg > 2:8785647/1‑150 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCggg > 1:5122463/1‑150 (MQ=255) tgtgGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCggg > 2:7293874/1‑150 (MQ=255) ccttcgCGGGCTTGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTc > 2:8661962/6‑150 (MQ=255) cttcgCGGGCTTGCCCGCTAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCg > 1:3458227/5‑150 (MQ=255) cttcgCGGGCTTGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCATCGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCg > 2:874712/5‑150 (MQ=255) cttcgCGGGCTTGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCg > 2:6259236/5‑150 (MQ=255) cttcgCGGGCTTGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCg > 1:2264877/5‑150 (MQ=255) ttcgCGGGCTTGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGa > 2:1094362/4‑150 (MQ=255) ttcgCGGGCTTGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGa > 1:6800525/4‑150 (MQ=255) ggAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGa > 2:3260988/1‑150 (MQ=255) gAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGAt > 2:8844356/1‑150 (MQ=255) gAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGAt > 1:8780413/1‑150 (MQ=255) gCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTc > 2:613410/1‑150 (MQ=255) gggCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTccc < 1:4422082/150‑1 (MQ=255) gggCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTccc > 1:4535120/1‑150 (MQ=255) gCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCcgc < 2:7609660/150‑1 (MQ=255) gCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCcgc < 2:6638884/150‑1 (MQ=255) cAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCcgcg > 2:1234364/1‑150 (MQ=255) cAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTG‑AGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCCGCGa < 2:5563687/150‑1 (MQ=255) cAAGCCAGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCcgcg > 2:4761144/1‑150 (MQ=255) aaGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCCGCGa > 2:7354232/1‑150 (MQ=255) aaGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCGGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTCCAAACCCTGGCCGATTACGCCCTCGGCTCCCGGGTCGATTCCCGCGa > 2:5395688/1‑150 (MQ=255) | GGGCTGGGTTCGCGTGCCTGGCGATAGCTTCTAAAGCACCACTGGCGCTCGGCTTCAAGAGGGGCCGCTTTGCGGCCCTTCGCGGGCTTGCCCGCTCCCACAGGTA‑ATCACAGGGTTTGAATGCTGTGATATCCCTGTGGGAGCGGGCAAGCCCGCGAAGGGCTGCACAGCAGCCCCGGCAATTCTGAAGGGAGCTGGATATGAGCGCCAACGTAGACCTCAACGATCGCCCGGATTACGACCGGGTGCTACAAACCCTGGCCGATTACGCCCTCGGCTACCGGGTCGATTCCCGCGA > NC_002947/2669914‑2670211 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |