| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,676,788 | G→A | 5.8% | intergenic (+74/+232) | PP_2343 → / ← PP_2344 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,676,788 | 0 | G | A | 5.8% | 816.7 / 25.5 | 259 | intergenic (+74/+232) | PP_2343/PP_2344 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (134/110); new base A (10/5); total (144/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.32e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 264 total aligned reads displayed.
CGAAATTGACGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCAAGC > NC_002947/2676639‑2676936 | gAAATTGACGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGt > 1:3878106/1‑150 (MQ=255) gAAATTGACGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGt > 2:5755192/1‑150 (MQ=255) ttGACGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGt > 1:3122822/1‑150 (MQ=255) tGACGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTg > 1:8024004/1‑150 (MQ=255) aCGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTgga > 1:2761825/1‑150 (MQ=255) cGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCTCCACGGACCCGTggcg < 1:4937346/150‑3 (MQ=255) gCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTggagg > 2:9159448/1‑150 (MQ=255) cATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGACCCGTggcgga < 2:5961589/150‑1 (MQ=255) aTTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGgaggag > 2:2995973/1‑150 (MQ=255) tttGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGgaga < 2:3331618/150‑1 (MQ=255) tttGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGgaga > 2:3111060/1‑150 (MQ=255) gTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGAc > 2:6988514/1‑150 (MQ=255) gTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGAc < 1:953375/150‑1 (MQ=255) cAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtg > 2:1437734/1‑150 (MQ=255) aGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCtgt < 1:6648942/150‑1 (MQ=255) cTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTAt > 2:7268441/1‑150 (MQ=255) cTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGAGCTGTGTAt > 2:4343754/1‑150 (MQ=255) tATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATc > 1:5863098/1‑150 (MQ=255) tATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATc > 1:1064859/1‑150 (MQ=255) tATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATc > 1:2076989/1‑150 (MQ=255) aTGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCg < 2:457770/150‑1 (MQ=255) tGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGa > 1:1915072/1‑150 (MQ=255) gATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGaa < 2:4674211/150‑1 (MQ=255) cATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTg > 1:5336214/1‑150 (MQ=255) cATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTg > 2:8425218/1‑150 (MQ=255) tGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCa > 2:5604390/1‑150 (MQ=255) tGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCa > 1:7644459/1‑150 (MQ=255) tGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCt < 1:1194407/150‑1 (MQ=255) cGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCa > 2:4161001/1‑150 (MQ=255) cGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCa < 1:7170179/150‑1 (MQ=255) tgtTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATc < 2:5267960/150‑1 (MQ=255) ttttGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATcga < 2:1915072/150‑1 (MQ=255) tttGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATcgac < 1:5054809/150‑1 (MQ=255) tttGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATcgac < 2:6679838/150‑1 (MQ=255) tGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATcgacga > 1:7835476/1‑150 (MQ=255) tGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTAACGAATGGCTGCAACGGCTGCCATcgacga < 2:8302118/150‑1 (MQ=255) ggggagTCCCAATGAAAGGCGAAAAGGTAGAAGGCGTGTCGAATAAGCACCACGAGGCATCGACTATGTCTGAGTTTTTCAGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAAAGGCTGCAACGGCTGCCATCGACGAGCAGa > 2:4830655/4‑150 (MQ=255) gagaGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGaa < 2:853902/150‑1 (MQ=255) gagaGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCCGCCATCGACGAGCAGaa < 1:409214/150‑1 (MQ=255) gagTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAgg < 2:376240/150‑1 (MQ=255) tCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGAtg > 2:8119897/1‑150 (MQ=255) cccAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGAtgt > 2:7061047/1‑150 (MQ=255) cAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGa > 1:518232/1‑150 (MQ=255) aaTGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGAt > 1:8134474/1‑150 (MQ=255) tGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTc > 1:4342511/1‑150 (MQ=255) tGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTc < 1:5728211/150‑1 (MQ=255) gAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCg > 2:4985903/1‑150 (MQ=255) aaaGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGc > 1:1473469/1‑150 (MQ=255) ggCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCa > 1:6931668/1‑150 (MQ=255) gCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAg > 2:587015/1‑150 (MQ=255) gAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGGGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCa > 2:2531163/1‑150 (MQ=255) aGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGt > 1:6792296/1‑150 (MQ=255) ggTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTc < 2:1177619/150‑1 (MQ=255) aGCAGGCGTGTCGACTAAGCCCCACGGGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGAGTCGCTCAGCAAAGTCTgg < 1:8449624/150‑1 (MQ=255) aGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAGGGATGTGATTCGCTCAGCAAAGTCTgg < 2:131575/150‑1 (MQ=255) aGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTgg < 2:131711/150‑1 (MQ=255) aGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTgg > 2:7507155/1‑150 (MQ=255) ggCGTGTCGACTAAGCCCCACGAGGCATCGACGATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGaa < 2:8236197/150‑1 (MQ=255) gtgtCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTc > 2:3970632/1‑150 (MQ=255) tgtCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCa < 2:2499990/150‑1 (MQ=255) tgtCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCa > 2:6253113/1‑150 (MQ=255) tCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGt < 2:653412/150‑1 (MQ=255) cGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTa < 1:2993292/150‑1 (MQ=255) tAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGACTTCAGTATGGc > 1:2082301/1‑150 (MQ=255) tAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGACTTCAGTATGGc > 2:3190430/1‑150 (MQ=255) gCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCaa < 1:6373214/150‑1 (MQ=255) ccccACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGACTTCAGTATGGCCAAg > 1:997732/1‑150 (MQ=255) ccccACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTAATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAg > 2:7088491/1‑150 (MQ=255) aGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCaaaa > 2:7719187/1‑150 (MQ=255) aGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCaaaa > 1:8610108/1‑150 (MQ=255) aGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCaaaa < 1:8719368/150‑1 (MQ=255) gCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAAtg > 1:736558/1‑150 (MQ=255) cATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAAtgt < 2:419819/150‑1 (MQ=255) cATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAAtgt > 2:2352984/1‑150 (MQ=255) tCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGa < 2:222673/150‑1 (MQ=255) tCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGa < 2:1636055/150‑1 (MQ=255) tCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGa > 1:7936139/1‑150 (MQ=255) aCTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCg > 1:2352124/1‑150 (MQ=255) tATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGa < 2:6734367/145‑1 (MQ=255) tCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACt > 2:3570968/1‑150 (MQ=255) tCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACt < 1:5525642/150‑1 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGACTTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTcc > 2:5248058/1‑150 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTcc > 2:2147030/1‑150 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTcc > 1:7200842/1‑150 (MQ=255) tGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTcc > 2:6512323/1‑150 (MQ=255) gAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCg > 1:6870017/1‑150 (MQ=255) gTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGcc < 2:7886376/150‑1 (MQ=255) ttttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTa < 1:3652054/150‑1 (MQ=255) tttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCGGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAg < 2:9039477/150‑1 (MQ=255) tctcctccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGACTTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAg > 2:5276930/3‑150 (MQ=255) ttCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGt > 2:6057671/1‑150 (MQ=255) tcctccACGGACCCGTGGCGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTa > 1:2814518/1‑150 (MQ=255) tcctccACGGACCCGTGGCGGAGAGACGATCTGGGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTa > 1:486254/1‑150 (MQ=255) tcctccACGGACCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTa > 2:4700081/1‑150 (MQ=255) tCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGACTTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTa > 2:757637/1‑150 (MQ=255) ccGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTaa < 1:6556235/150‑1 (MQ=255) gCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGAAGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATc < 1:6271660/150‑1 (MQ=255) ccACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATcc < 1:4665633/150‑1 (MQ=255) gggTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCAag < 1:1038464/150‑1 (MQ=255) ggTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCAagc < 1:4637530/150‑1 (MQ=255) | CGAAATTGACGCATTTGTCAACCAGCCCTATGATCACCATGAGCTTGAGCGTGTTTTGAACGGAGAGTCCCAATGAAAGGCGAAAAGGTAGCAGGCGTGTCGACTAAGCCCCACGAGGCATCGACTATGTCTGAGTTTTTCCGCCACGGGTCCGTGGAGGAGAGACGATCTGTGTATCGAATGGCTGCAACGGCTGCCATCGACGAGCAGAAGGATGTGATTCGCTCAGCAAAGTCTGGGGAATTCAGTATGGCCAAGTGCAAAATGTGAGCGTTCACTCCGCCTAGTAATCCCAAGC > NC_002947/2676639‑2676936 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |