| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,758,802 | A→T | 6.0% | intergenic (+16/+17) | czcA‑II → / ← PP_2411 | cation efflux system protein/MFS transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,758,802 | 0 | A | T | 6.0% | 666.4 / 17.8 | 212 | intergenic (+16/+17) | czcA‑II/PP_2411 | cation efflux system protein/MFS transporter |
| Reads supporting (aligned to +/- strand): ref base A (114/83); new base T (5/9); total (119/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.62e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 220 total aligned reads displayed.
CCGGGGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACGCC > NC_002947/2758653‑2758951 | ccgggGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCaa > 2:907409/1‑150 (MQ=255) gggCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGc < 1:651955/150‑1 (MQ=255) ggCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAATGCa < 2:3207190/150‑1 (MQ=255) ggCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCa < 2:4612645/150‑1 (MQ=255) agagGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGcc > 2:8955915/1‑150 (MQ=255) gagGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGccc < 1:576050/150‑1 (MQ=255) agGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCCTTGCAGcccc < 2:4931084/150‑1 (MQ=255) tGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCCTTGCAGCCCcaaa < 1:154257/150‑2 (MQ=255) tGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCCTTGCAGCCCcaaa < 2:6418765/150‑2 (MQ=255) gatcctgCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCcaaca > 2:8890038/7‑150 (MQ=255) gCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCAGTTGGGGCTGCCTTGCAGCCCcaaat < 1:6866598/150‑3 (MQ=255) ggCCACTGGCGACGGTGGTGTTTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTc < 1:6708658/150‑1 (MQ=255) cACTGGCGACGGTGGTGATTGGCGTAATCTTGTCTTCTACCGCGCTGACGTTGGTGGTGTTGCGGGCTTTTTATCAGTGGGCGTATGGGGGGGATGAGCAGCTGGATGGATTAGCATTTGGGGCTGAAAGGCAGCCCCAACAACCTCaaa < 1:5728017/150‑1 (MQ=255) cACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCaaa > 1:3013943/1‑150 (MQ=255) cACTGGCGACGGTGGTGATGGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGTTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCaaa < 1:8329333/150‑1 (MQ=255) tGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACgg < 2:8232126/150‑1 (MQ=255) tGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACgg > 1:1318151/1‑150 (MQ=255) ggttATGGGCGTAATCTTGTCTTCAACCGCGCTGAGGTTGGTGGTGTTGCGGGGGTTGTATCAGTGGGCGTTTCGGGGGGATGCGCAGCTGTACGGCTGCGCTTTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGc < 1:4792950/150‑1 (MQ=255) gtgATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTcctcgc < 2:4470306/150‑6 (MQ=255) tttttGGAGTAATCTTGTCTTCTACGGCTCTGACGTTGCTGTTTTTGCCTGATTTGTTTCAGTGGGCTTTTCGGCTGTATGACAATCAGGATGGCTGAGCATTTGGTGATGAAAGGCAGCCCCAACAACCTCAAACCGCCCTTCGGGCAc < 2:1706883/147‑1 (MQ=255) gCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGccc > 2:2033037/1‑150 (MQ=255) ttGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCg > 2:4893116/1‑150 (MQ=255) ntGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCg > 1:7307291/2‑150 (MQ=255) tGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGcccc > 2:4329144/1‑108 (MQ=255) tGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGcccc < 1:4329144/108‑1 (MQ=255) tcttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTcc > 2:7701965/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcac > 2:3992530/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCcac > 1:6404954/1‑150 (MQ=255) ttctACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCGCAGACGGCGCTTCGGGCTCCAGCCCGCACACCGTCcac > 2:9155399/1‑150 (MQ=255) tACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACAcc > 2:2198018/1‑150 (MQ=255) aCCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAGCGGCCCTTCGGGCACCAGCCCGCACACCGTCCACAccc > 1:7802051/1‑150 (MQ=255) ccGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCa > 2:1744527/1‑150 (MQ=255) cgcgCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAg < 2:2786748/150‑1 (MQ=255) gcTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgtc > 2:5451523/1‑150 (MQ=255) tGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGgtcgt > 1:1011814/1‑150 (MQ=255) ttGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGc < 2:8984217/150‑1 (MQ=255) cTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCaaa < 2:2932129/150‑1 (MQ=255) cTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCaaa > 1:8233642/1‑150 (MQ=255) cTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCaaa < 2:1182333/150‑1 (MQ=255) tGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAg > 2:2691652/1‑150 (MQ=255) gtgtTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCGGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGaa < 1:4388472/150‑1 (MQ=255) gtTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAAt < 2:2830707/150‑1 (MQ=255) gtTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAAt > 1:1165412/1‑150 (MQ=255) tGCCGGCGTTGTATCTGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATcc < 1:2058203/150‑1 (MQ=255) gCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGAc > 1:4915971/1‑150 (MQ=255) aTCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCg > 1:5149236/1‑150 (MQ=255) gTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCaa > 1:2482001/1‑150 (MQ=255) ggCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGc < 2:1059996/150‑1 (MQ=255) gTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCACTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCaa < 2:7944545/150‑1 (MQ=255) tATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAAc < 2:2482001/150‑1 (MQ=255) aTCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAAcc > 2:538851/1‑150 (MQ=255) ggcggGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGc < 2:5515987/150‑1 (MQ=255) gcggGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGcc > 1:5638224/1‑150 (MQ=255) gcggGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGcc < 1:1983180/150‑1 (MQ=255) ggATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCccac < 1:8171701/150‑1 (MQ=255) tGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCaa < 2:5655853/150‑1 (MQ=255) tGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCaa > 2:3052269/1‑150 (MQ=255) tGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCaa > 1:401304/1‑150 (MQ=255) gAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAAc < 2:4678754/150‑1 (MQ=255) gcagcaGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGc > 1:6264149/1‑150 (MQ=255) gcagcaGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGc > 2:7276163/1‑150 (MQ=255) cagcagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGcc > 1:7821229/1‑150 (MQ=255) cagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGcc > 2:8405046/1‑137 (MQ=255) cagGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGcc < 1:8405046/137‑1 (MQ=255) gAAGGCTGAGCATTTGGGGCTGCATGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAAccc < 2:6377998/131‑1 (MQ=255) gAAGGCTGAGCATTTGGGGCTGCATGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAAccc > 1:6377998/1‑131 (MQ=255) gAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCAGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAgc > 2:6661167/1‑150 (MQ=255) ggCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCa > 1:4266426/1‑150 (MQ=255) cTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAAt < 2:1331547/150‑1 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 1:6481656/1‑150 (MQ=255) tGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATc > 2:1582502/1‑150 (MQ=255) gAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATca > 1:610565/1‑150 (MQ=255) gAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATca > 2:7915188/1‑150 (MQ=255) gAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATca < 1:8955915/150‑1 (MQ=255) aGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATcac < 1:2146025/150‑1 (MQ=255) cATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATcacca > 1:5286306/1‑150 (MQ=255) aTTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATcaccac > 2:7000110/1‑150 (MQ=255) aTTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATcaccac > 2:8742307/1‑150 (MQ=255) tttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCaa < 2:1566426/116‑1 (MQ=255) tttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCaccacc > 2:3170407/1‑150 (MQ=255) ttaggggCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCCCCCGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCaccacc > 2:8651249/4‑150 (MQ=255) gttGGGGCTGCCTTGCAGCCCCCACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCACTCaccacc > 2:9066929/2‑150 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca < 1:265300/150‑1 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca < 1:6028165/150‑1 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca > 1:7094116/1‑150 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca < 1:7713863/150‑1 (MQ=255) ttGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCAccacca < 1:1699432/150‑1 (MQ=255) tGGGGCTGCCTTGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAg > 2:5844488/1‑150 (MQ=255) ggggCTGCCTTGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCGGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAgg > 2:2597786/1‑150 (MQ=255) gggCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGt < 1:6230019/150‑1 (MQ=255) ggCTGCAAGGCAGCCCCAACAACCTCAATCGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTa > 2:4147273/1‑150 (MQ=255) ggCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTa < 1:8624346/150‑1 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa < 2:6269315/150‑1 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa < 2:3727126/150‑1 (MQ=255) tGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGaa < 2:1318151/150‑1 (MQ=255) gCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAAc > 1:5325600/1‑150 (MQ=255) gCAAGGAAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCAACACCCAGGTCGTCATGCAAAGAAAACCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGgaagaaa > 2:392254/1‑149 (MQ=255) cAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACg > 2:7710632/1‑150 (MQ=255) cAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACg > 2:1057881/1‑150 (MQ=255) cAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACg > 1:948733/1‑150 (MQ=255) | CCGGGGCAGAGGTGCAGCGGCCACTGGCGACGGTGGTGATTGGCGGAATCTTGTCTTCTACCGCGCTGACGTTGCTGGTGTTGCCGGCGTTGTATCAGTGGGCGTATCGGCGGGATGAGCAGCAGGAAGGCTGAGCATTTGGGGCTGCAAGGCAGCCCCAACAACCTCAAACGGCCCTTCGGGCACCAGCCCGCACACCGTCCACACCCAGGTCGTCATGCAAAGAAATCCGCGACGTTTCCGGCAACGCCAACCCGCCCACCAACGCCACCAGCGCAATCACCACCAGGTAGAACGCC > NC_002947/2758653‑2758951 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |