| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,792,284 | A→T | 8.8% | intergenic (‑72/+17) | PP_2442 ← / ← sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,792,284 | 0 | A | T | 8.8% | 570.0 / 33.9 | 191 | intergenic (‑72/+17) | PP_2442/sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Reads supporting (aligned to +/- strand): ref base A (141/32); new base T (6/11); total (147/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.11e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.41e-01 | |||||||||||
Only 100 of 202 total aligned reads displayed.
CTTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGC > NC_002947/2792135‑2792432 | cTTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCaa < 1:3195769/150‑1 (MQ=255) ttttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCaaa > 2:2117018/1‑150 (MQ=255) ttttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCaaa < 1:8498496/150‑1 (MQ=255) ttttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCaaa > 2:4511705/1‑150 (MQ=255) tCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcg < 1:6642188/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcgg < 1:4774792/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcgg > 2:8510344/1‑150 (MQ=255) gATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCGGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcggc > 2:6222614/1‑150 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcggccc > 2:6766920/1‑150 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCTTT‑Gcggccccaa < 1:1611253/150‑3 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCTTT‑Gcggccccaa < 1:6249019/150‑3 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCTTT‑Gcggccccaa < 1:6154896/150‑3 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcggccccgg > 2:1453851/1‑150 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcggccccaa < 1:3269131/150‑3 (MQ=255) aGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑Gcggccccggccc > 1:2301031/1‑150 (MQ=255) gCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCGTCACCCGCGGTTTCGTGTTCTGACCTGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATCGGGGCCGCTTT‑Gcggccccaattgc < 2:7034719/150‑7 (MQ=255) cgcgGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCTTT‑Gcggcc > 2:6620730/1‑134 (MQ=255) gcgGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGt > 2:4115148/1‑150 (MQ=255) gcgGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGt > 1:6176461/1‑150 (MQ=255) gATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGgc > 1:432188/1‑150 (MQ=255) aTCTCGATGCTGTTGATGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGgcg > 1:4877045/1‑150 (MQ=255) aTCTCGATGCTGTTGATGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGgcg > 1:306732/1‑150 (MQ=255) ctcGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACCTGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCgct > 2:5002465/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 1:5499417/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 2:8723851/1‑150 (MQ=255) tGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGctct > 1:178257/1‑150 (MQ=255) ttttGAAGGGGCCTTCACCCGGGTTTTGGTTTTCTGACCTGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGTTTGGTATTGCCATCGCGTAAGGCATTTGGGGCCGAAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa < 2:7588390/148‑1 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:1836834/1‑150 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 1:5927996/1‑150 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:2745023/1‑150 (MQ=255) gTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAg > 2:324931/1‑150 (MQ=255) ttGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGc > 1:1314446/1‑150 (MQ=255) ttGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGc > 1:7574233/1‑150 (MQ=255) ttGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGc > 2:6452911/1‑150 (MQ=255) cgCGGCCTTCACCGGGGTTTTGTTTTTGTTACCGGG‑CCCTGTCTCGTGGCGGGGTAAAGGCCACTTGGGTATTTATTGCAACCGCTTACGGAATTTGGGGCCGCAAC‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGa < 2:4360270/149‑1 (MQ=255) gCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGAc > 1:4694731/1‑150 (MQ=255) ccgcccTACACCCGGGTTTTCTTTTTCTTA‑ATGGCCCCTTTCTCGTGGCTGGGCAAAGCCAACTAGGTTATTTAATCCCATCGC‑TAAAGCAAATTGGGCCCCAAACGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGAc < 2:3571627/146‑1 (MQ=255) cGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACa > 2:8026036/1‑150 (MQ=255) cGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACa > 1:8457880/1‑150 (MQ=255) cTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGcc > 1:7668388/1‑150 (MQ=255) ttCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCAGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCcg > 2:3201999/1‑150 (MQ=255) ccGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 2:1276269/1‑150 (MQ=255) gcgGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGt > 1:8526460/1‑150 (MQ=255) gcgGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGt > 1:349171/1‑150 (MQ=255) ttCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGCAACGGCCACTGGGGTAGGTAATGCCATCGCTTACGGAATTTGGGGCCGCAAC‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACa < 2:2100017/150‑1 (MQ=255) cGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGc > 2:7074058/1‑150 (MQ=255) gtgtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGca > 1:3884368/1‑150 (MQ=255) gtgtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGca > 1:8315468/1‑150 (MQ=255) gtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcatc > 1:6575771/1‑148 (MQ=255) gtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcaca > 2:1555130/1‑150 (MQ=255) gtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcaca > 2:5997226/1‑150 (MQ=255) ttCTGACCTGG‑CCCGGGCTGGTGGGTGGGGACTGGCCACTGGGTTTGGTATTGCCAGGGCTTATGGAATTTGGGGCCGCAAT‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACAt < 2:2155945/150‑1 (MQ=255) ttCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcacaa > 2:1330794/1‑149 (MQ=255) tacTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGAAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTAGAGCCTGACATGCCGCGGCAGTGAACAGCACAt > 2:1791195/3‑150 (MQ=255) cTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATCGGGGCCGCTTT‑Gcggccccaatt > 2:8451187/1‑88 (MQ=38) cTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATCGGGGCCGCTTT‑Gcggccccaatt < 1:8451187/92‑5 (MQ=38) tGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCgg > 1:7269739/1‑150 (MQ=255) ggg‑CCCTGTCTCGTGGCTGGGTAACGGCCACTTGGTTAGTAATTGCCATCGCGAAAGCAAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaa < 2:8398053/149‑1 (MQ=255) g‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaaga > 2:5648979/1‑150 (MQ=255) ccTGTCTGGTGGCGGGGGAATGGCCATTGGGTTTGTTATTGCCTTCGGTTATGGCATTGGGGGCCGCAAC‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAt < 1:9142234/150‑1 (MQ=255) ccTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAt > 1:5329488/1‑150 (MQ=255) cTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAtt > 1:2522069/1‑150 (MQ=255) tGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTc > 1:8103626/1‑150 (MQ=255) tcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAgcg > 2:9087355/1‑150 (MQ=255) ggggAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCg > 1:4179311/1‑150 (MQ=255) ggAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGc > 2:933614/1‑150 (MQ=255) gAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAG‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGcc > 1:6465804/1‑150 (MQ=255) aaGGCAACTTGGGTAGTTAATGCAATCGCTTAAGGAAATTGGGGCCGAAAA‑GCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGa < 2:1442419/150‑1 (MQ=255) aaGGCAACTAGTGTATTTAATGCCATCGCTTAAGCCAATTGGGGCCTCAAA‑GCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGa < 2:5901911/150‑1 (MQ=255) gCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTc > 2:1128877/1‑150 (MQ=255) cACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCt > 2:5802170/1‑150 (MQ=255) ggtaATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 1:2936268/1‑150 (MQ=255) gtaATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCg > 2:6802439/1‑150 (MQ=255) gtaATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCg > 1:37949/1‑150 (MQ=255) aaTGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgat > 1:8606820/1‑150 (MQ=255) gcctgcgctTATGGCATTGGGGGCCGAAAC‑GCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatgat < 2:430204/145‑1 (MQ=255) gCCATCGCGTATGGAATTTGGGGCCGAAAC‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatgat < 2:2850615/150‑1 (MQ=255) cATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGAtgatga > 1:7522611/1‑150 (MQ=255) aTCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGaa > 2:790450/1‑150 (MQ=255) tggcgTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAg < 2:5232072/148‑1 (MQ=255) cgcgTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGc > 1:3701598/1‑150 (MQ=255) gTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa > 1:8366042/1‑150 (MQ=255) aGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCg > 2:475327/1‑150 (MQ=255) aGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCg > 2:1963095/1‑150 (MQ=255) atttGGGGCCGCAAC‑GCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAac < 2:6314399/148‑1 (MQ=255) ccggggCCGCTTT‑GCGGCCCCAGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACAGGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAacca > 2:8805502/3‑150 (MQ=255) cggggCCGCTTT‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac > 2:6671895/2‑150 (MQ=255) gCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGc > 2:224869/1‑150 (MQ=255) gCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGc > 2:4647044/1‑150 (MQ=255) gCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGc > 2:4646979/1‑150 (MQ=255) ccGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCa > 1:1114536/1‑150 (MQ=255) ccGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCa > 1:2172883/1‑150 (MQ=255) gCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 2:6110966/1‑150 (MQ=255) gCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 1:2825396/1‑150 (MQ=255) gCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 1:7119504/1‑150 (MQ=255) gCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 1:7445346/1‑150 (MQ=255) gCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 2:2883162/1‑150 (MQ=255) cAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATgg > 1:7051110/1‑150 (MQ=255) aaa‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGc > 1:1497075/1‑150 (MQ=255) aaa‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGc > 2:1235879/1‑150 (MQ=255) | CTTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCGTAAGGCAATTGGGGCCGCAAA‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGC > NC_002947/2792135‑2792432 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |