| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 2,792,285 | A→T | 9.6% | intergenic (‑73/+16) | PP_2442 ← / ← sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 2,792,285 | 0 | A | T | 9.6% | 529.0 / 37.6 | 191 | intergenic (‑73/+16) | PP_2442/sstT | DUF480 domain‑containing protein/serine/threonine transporter SstT |
| Reads supporting (aligned to +/- strand): ref base A (140/16); new base T (6/12); total (147/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.89e-07 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
Only 100 of 204 total aligned reads displayed.
TTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGCAA > NC_002947/2792136‑2792434 | ttttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCaa‑a < 1:8498496/150‑1 (MQ=255)ttttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCaa‑a > 2:2117018/1‑150 (MQ=255) tttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑g > 1:4636880/1‑150 (MQ=255) ttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gc < 2:6297595/150‑1 (MQ=255) ttCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gc < 2:7640810/150‑1 (MQ=255) tCGATCAGCGAGCCGAGAACTCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGTTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCTCTAGGGTTGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gcg < 2:4537310/150‑1 (MQ=255) tCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gcg < 2:5991249/150‑1 (MQ=255) tCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gcg < 1:6642188/150‑1 (MQ=255) cGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gcgg > 2:8510344/1‑150 (MQ=255) tCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCTT‑T‑Gcggccc < 1:470794/150‑1 (MQ=255) gCGAGCCGAGATCGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCATTTGGGGCCGCAA‑A‑Gcggccccaa < 1:3842290/150‑3 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCTT‑T‑Gcggccccaa < 1:6249019/150‑3 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCTT‑T‑Gcggccccaa < 1:6154403/150‑3 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCTT‑T‑Gcggccccaa < 1:1611253/150‑3 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gcggccccgg > 1:5894851/1‑150 (MQ=255) gCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gcggccccgg > 2:1453851/1‑150 (MQ=255) aGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑Gcggccccggccc > 1:2301031/1‑150 (MQ=255) cGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCctct > 1:4234049/1‑150 (MQ=255) gcgGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGt > 1:3970788/1‑150 (MQ=255) gcgGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGt > 1:6176461/1‑150 (MQ=255) gcgGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGt > 2:4115148/1‑150 (MQ=255) aTCTCGATGCTGTTGATGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGgcg > 1:306732/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 1:5499131/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 1:3204891/1‑150 (MQ=255) gATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCgctgct > 2:8723851/1‑150 (MQ=255) aTGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGctc > 2:809441/1‑150 (MQ=255) tGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGctct > 1:178257/1‑150 (MQ=255) ttttgccgCGGCCTACCCCCGTGTTTTGGTGTTCTGACTGGG‑CCGTGTCTGGGGGGTGGGCAATGCCCCCTCGGTTTGTTTTGGCCCGGGC‑‑TTAGGGAATTGGGGGCCCAACC‑GGGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa < 2:6929007/143‑1 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:6744743/1‑150 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:1836834/1‑150 (MQ=255) tGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGa > 2:2745023/1‑150 (MQ=255) gTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAg > 2:324931/1‑150 (MQ=255) ttGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGc > 1:7574233/1‑150 (MQ=255) ttGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGc > 1:1314446/1‑150 (MQ=255) ccgcccTACACCCGGGTTTTCTTTTTCTTA‑ATGGCCCCTTTCTCGTGGCTGGGCAAAGCCAACTAGGTTATTTAATCCCATCGC‑‑TAAAGCAAATTGGGCCCCAA‑ACGCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGAc < 2:3571627/146‑1 (MQ=255) cGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACa > 1:8457880/1‑150 (MQ=255) cTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGcc > 1:7668388/1‑150 (MQ=255) ttCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCAGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCcg > 2:3201999/1‑150 (MQ=255) tCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGTCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCcgc < 2:676796/150‑1 (MQ=255) ccGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCa > 2:1276269/1‑150 (MQ=255) gcgGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGt > 1:4790448/1‑150 (MQ=255) gcgGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGt > 1:8526460/1‑150 (MQ=255) ttCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGCAACGGCCACTGGGGTAGGTAATGCCATCGCT‑TACGGAATTTGGGGCCGCAA‑C‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACa < 2:2100017/150‑1 (MQ=255) gtgtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGca > 1:8315468/1‑150 (MQ=255) gtgtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGca > 1:3430159/1‑150 (MQ=255) tgtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcac > 2:4310354/1‑150 (MQ=255) gtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcatc > 1:6575771/1‑148 (MQ=255) gtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcaca > 2:1555130/1‑150 (MQ=255) gtTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGACCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGcatc > 2:4365409/1‑148 (MQ=255) ttCTGACCTGG‑CCCGGGCTGGTGGGTGGGGACTGGCCACTGGGTTTGGTATTGCCAGGGCT‑TATGGAATTTGGGGCCGCAA‑T‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACAt < 2:2155945/150‑1 (MQ=255) ttCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACAt > 2:1330768/1‑150 (MQ=255) ttCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACAt > 1:3676024/1‑150 (MQ=255) tacTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑AAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTAGAGCCTGACATGCCGCGGCAGTGAACAGCACAt > 2:1791195/3‑150 (MQ=255) cTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATCGGGGCCGCTT‑T‑Gcggccccaatt > 2:8451187/1‑88 (MQ=38) cTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATCGGGGCCGCTT‑T‑Gcggccccaatt < 1:8451187/92‑5 (MQ=38) tGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCgg > 1:7269739/1‑150 (MQ=255) ggg‑CCCTGTGTCGGGGGTGGGTAACGGCCACT‑TGGTTTGTAATGGCATGGGGTTAAGGATTTGGGGGCCGAAA‑C‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaa < 2:4743087/149‑1 (MQ=255) ggg‑CCCTGTCTCGTGGCTGGGTAACGGCCACTTGGTTAGTAATTGCCATCGCG‑AAAGCAAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaa < 2:8398053/149‑1 (MQ=255) g‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCgaaga > 2:5648979/1‑150 (MQ=255) ccTGTCTGGTGGCGGGGGAATGGCCATTGGGTTTGTTATTGCCTTCGGT‑TATGGCATTGGGGGCCGCAA‑C‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAt < 1:9142234/150‑1 (MQ=255) cTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAAtt > 1:2522069/1‑150 (MQ=255) tGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTc > 1:8103626/1‑150 (MQ=255) tctcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAg > 2:5015861/1‑150 (MQ=255) tcGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAgcg > 2:9087355/1‑150 (MQ=255) ggAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGc > 2:933614/1‑150 (MQ=255) gAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑G‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGcc > 1:6465804/1‑150 (MQ=255) gAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGcc > 2:6023767/1‑150 (MQ=255) acggCCACTTGGTTTGTTAAGGCCATCGCG‑TCAGGATTTTGGGGCCGCAA‑C‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGa < 2:6410433/148‑1 (MQ=255) aaGGCAACTTGGGTAGTTAATGCAATCGCT‑TAAGGAAATTGGGGCCGAAA‑A‑GCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGa < 2:1442419/150‑1 (MQ=255) aaGGCAACTAGTGTATTTAATGCCATCGCT‑TAAGCCAATTGGGGCCTCAA‑A‑GCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGa < 2:5901911/150‑1 (MQ=255) aGGCCACTCGGTTTGGTATTGCAATCGCT‑TACGGAATTGGGGGCCGCAA‑C‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAg < 2:4877045/150‑1 (MQ=255) gCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTc > 2:1128877/1‑150 (MQ=255) cACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCt > 2:5802170/1‑150 (MQ=255) ctcgggTTGGTACTGCCATCGCT‑TACGGCAAGTGGGCCCGCAA‑C‑GCGCCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGc < 2:7041269/147‑1 (MQ=255) cgcgggTTGGTAAGGCCCTCGCG‑TACGGCATTGGGGGCCGCAC‑C‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACCTGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGc < 2:6620248/147‑1 (MQ=255) ggtaATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGcc > 1:2936268/1‑150 (MQ=255) gtaATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCg > 1:37361/1‑150 (MQ=255) aaTGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgat > 1:8606820/1‑150 (MQ=255) gCCATCGCG‑TATGGAATTTGGGGCCGAAA‑C‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCgatgat < 2:2850615/150‑1 (MQ=255) cATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGAtgatga > 1:7522611/1‑150 (MQ=255) aTCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGaa > 2:4208/1‑150 (MQ=255) aTCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGaa > 2:790594/1‑150 (MQ=255) g‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCa > 1:8366042/1‑150 (MQ=255) aGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCg > 2:1963095/1‑150 (MQ=255) ccggggCCGCTT‑T‑GCGGCCCCAGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACAGGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAacca > 2:8805502/3‑150 (MQ=255) cggggCCGCTT‑T‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAaccac > 2:6671782/2‑150 (MQ=255) gggCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCt > 2:727109/1‑150 (MQ=255) gCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGc > 2:4647025/1‑150 (MQ=255) gCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGc > 2:224869/1‑150 (MQ=255) ccGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCa > 1:1114536/1‑150 (MQ=255) ccGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCa > 1:2172883/1‑150 (MQ=255) gCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 1:5319616/1‑150 (MQ=255) gCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 1:7119504/1‑150 (MQ=255) gCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 2:2883162/1‑150 (MQ=255) gCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 1:2825396/1‑150 (MQ=255) gCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 1:7445346/1‑150 (MQ=255) gCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATg > 2:6111351/1‑150 (MQ=255) cAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATgg > 1:7051110/1‑150 (MQ=255) aa‑a‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGc > 2:1235879/1‑150 (MQ=255) aa‑a‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGc > 1:1497075/1‑150 (MQ=255) | TTTTCGATCAGCGAGCCGAGAACGCGGATCTCGATGCTGTTGAAGCGGCCTTCACCCGCGGTTTCGTGTTCTGACATGG‑CCCTGTCTCGTGGCTGGGGAAAGGCCACTAGGGTAGGTAATGCCATCGCG‑TAAGGCAATTGGGGCCGCAA‑A‑GCGGCCCCGGCCCTCTTAGCCGTGGCGCTGCTCTTGAGCCTGACATGCCGCGGCAGTGAACAGCACATCGGTCGAAGAATTCAGCGCCGTTTCGGCCGAGTCCTGCAACACGCCGATGATGAAGCCCACCGCAACCACCTGCATGGCAA > NC_002947/2792136‑2792434 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |