BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,810,513	G→T	7.1%	noncoding (412/434 nt)	PP_mr35 ←	cspA regulatory region

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,810,513	0	G	T	7.1%	711.9 / 32.4	225	noncoding (412/434 nt)	PP_mr35	cspA regulatory region
Reads supporting (aligned to +/- strand): ref base G (98/111); new base T (8/8); total (106/119)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.22e-01

Only 100 of 231 total aligned reads displayed.

GCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGAAGTGTACGAA  >  NC_002947/2810364‑2810662

gcAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAGAAAAACCCGCCACAAg                                                                                                                                                       >  1:4606345/1‑150 (MQ=255)

  aaaaTGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAggg                                                                                                                                                     >  2:5798704/1‑150 (MQ=255)

  aaaaTGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCATTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAggg                                                                                                                                                     <  1:2615252/150‑1 (MQ=255)

   aaaTGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGc                                                                                                                                                    <  2:8103305/150‑1 (MQ=255)

         gAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGttt                                                                                                                                              >  2:1711208/1‑150 (MQ=255)

          aaaaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGACCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAAACCGCCACAAGGGCGGGtttt                                                                                                                                             >  1:2078404/1‑150 (MQ=255)

          aaaaGACTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttt                                                                                                                                             >  2:6290619/1‑150 (MQ=255)

           aaaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGACCACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCCTTGTGGCGGGttttt                                                                                                                                            <  2:6012290/150‑1 (MQ=39)

           aaaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCCTTGTGGCGGGttttt                                                                                                                                            <  2:3915594/150‑1 (MQ=39)

           aaaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGttttt                                                                                                                                            <  2:693400/150‑1 (MQ=255)

           aaaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGttttt                                                                                                                                            <  2:1960129/150‑1 (MQ=255)

            aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCCTTGTGGCGGGtttttt                                                                                                                                           <  1:932701/150‑1 (MQ=39)

            aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt                                                                                                                                           <  2:3103989/150‑1 (MQ=255)

            aaGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGtttttt                                                                                                                                           <  1:3346275/150‑1 (MQ=255)

              gCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTa                                                                                                                                         >  2:9122298/1‑150 (MQ=255)

                cTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACa                                                                                                                                       <  1:5761263/150‑1 (MQ=255)

                 tGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAg                                                                                                                                      >  2:1470696/1‑150 (MQ=255)

                 tGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAg                                                                                                                                      >  2:5316065/1‑150 (MQ=255)

                 tGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAg                                                                                                                                      >  1:5971853/1‑150 (MQ=255)

                          gCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGaa                                                                                                                             >  2:1073828/1‑150 (MQ=255)

                            cTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAAtt                                                                                                                           >  1:29460/1‑150 (MQ=255)

                            cTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAAtt                                                                                                                           >  1:4616698/1‑150 (MQ=255)

                                   gAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCgg                                                                                                                    <  1:4108508/150‑1 (MQ=255)

                                    aGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGa                                                                                                                   <  2:846846/150‑1 (MQ=255)

                                       gggTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGa                                                                                                                <  1:6489807/150‑1 (MQ=255)

                                       gggTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGa                                                                                                                <  1:5431537/150‑1 (MQ=255)

                                           tCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCt                                                                                                            <  1:1917566/150‑1 (MQ=255)

                                             aCCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCtgt                                                                                                          <  2:6559564/150‑1 (MQ=255)

                                               ccGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGc                                                                                                        >  2:2018934/1‑150 (MQ=255)

                                               ccGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGc                                                                                                        >  2:7104281/1‑150 (MQ=255)

                                                   tggcacGGGCTTTGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAAc                                                                                                              <  2:6604462/137‑1 (MQ=255)

                                                       acGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCCGATGATGCATCACCCATAAAAAAACCCGCCCCAAGGGCGGGTTTTTTTACAGCTCTCCGAATTACTCCGGACGAACCTGTGCAGCCTGCa                                                                                                >  1:7866200/1‑150 (MQ=255)

                                                         gggCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATg                                                                                              >  2:6557368/1‑150 (MQ=255)

                                                         gggCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATg                                                                                              <  2:2259121/150‑1 (MQ=255)

                                                           gCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGcc                                                                                            >  2:7588216/1‑150 (MQ=255)

                                                            cAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCCTCACCCATAAAAAAACCCGCCCCAAGGGCGGGTTTTTTTACAGCTATCCGACTTACTCCGGACGAACCTGTGCAGCCTGCATGccc                                                                                           >  2:5432012/1‑150 (MQ=255)

                                                             aaaGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCt                                                                                          >  2:3334047/1‑150 (MQ=255)

                                                             aaaGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCt                                                                                          >  1:6965322/1‑150 (MQ=255)

                                                               aGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTc                                                                                        <  1:1553918/150‑1 (MQ=255)

                                                                        cATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCgcgc                                                                               >  2:678660/1‑150 (MQ=255)

                                                                           tCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCg                                                                            <  2:4812154/150‑1 (MQ=255)

                                                                             aCCCGACAGTCGGAGTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCAAAACAAAACCCGCCCCCAGGGCGGGTTTTTTTACAGCAATCCGAATTACTCCGGACGACCCCGTGCAGCCTGCCTGCCCTTCTGGCCGCGCTCGGc                                                                          <  1:3019538/150‑1 (MQ=255)

                                                                                 tACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCCTCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGcgacg                                                                      >  2:7988276/1‑150 (MQ=255)

                                                                                 tACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGcga                                                                        >  2:3891714/1‑148 (MQ=255)

                                                                                 tACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGcga                                                                        <  1:3891714/148‑1 (MQ=255)

                                                                                 tACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCAACCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCAGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGcgacg                                                                      >  2:4524934/1‑150 (MQ=255)

                                                                                   cAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGaa                                                                    <  1:8918452/150‑1 (MQ=255)

                                                                                    aGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCAGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAg                                                                   >  2:3021804/1‑150 (MQ=255)

                                                                                      tCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGa                                                                 >  1:3280032/1‑150 (MQ=255)

                                                                                        ggTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAACAAACCCGCCACAAGGGCGGGTTTTTTTACAGCGATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGaaa                                                               <  1:8334970/150‑1 (MQ=255)

                                                                                        ggTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGaaa                                                               <  1:3723773/150‑1 (MQ=255)

                                                                                          tttCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACa                                                             <  1:2644381/150‑1 (MQ=255)

                                                                                           ttCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAg                                                            >  1:2186855/1‑150 (MQ=255)

                                                                                             cGCAGGCACGCCCGCCCCTTCAGATGATGCATCACCCAGAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAAGTACTCCGGACGACCCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTc                                                          <  2:5575650/150‑1 (MQ=255)

                                                                                              gCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGACGTACTCCGGACGACCCTGTGCAGCCTGCCTGCCCGTCTGGCCGCGCGCGGCGACGAAGGAAACCGTCt                                                         >  1:4024967/1‑150 (MQ=255)

                                                                                              gCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACCGTCt                                                         >  1:6485432/1‑150 (MQ=255)

                                                                                              gCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCt                                                         >  2:3469128/1‑150 (MQ=255)

                                                                                              gCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCt                                                         >  1:1038673/1‑150 (MQ=255)

                                                                                              gCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCAGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTcg                                                         >  2:2396016/1‑149 (MQ=255)

                                                                                                 ggCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGc                                                      <  1:8381477/150‑1 (MQ=255)

                                                                                                  gCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATGCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGcc                                                     >  1:2011397/1‑150 (MQ=255)

                                                                                                  gCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGcc                                                     >  1:3786212/1‑150 (MQ=255)

                                                                                                   cAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACCGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCct                                                    <  2:1264106/150‑1 (MQ=255)

                                                                                                    aaTCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCctt                                                   <  1:5164025/150‑1 (MQ=255)

                                                                                                    aaTCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAAGTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGACACAGTCTGGCctt                                                   >  2:7293942/1‑150 (MQ=255)

                                                                                                         cgccgcTTCATATGATGCATCACCCATAACAAAACCCGCCACAAGGGCTGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTTTGCAGCCTGCATGCCCTTATGGCCGCGCTCGTCGACGAATGAAACAGTCTGGCCTTCTTTc                                              <  2:6457613/150‑1 (MQ=255)

                                                                                                          gCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCa                                             <  1:6119738/150‑1 (MQ=255)

                                                                                                          gCCCCGTCAGATGATGCATCACCCACACCACACCCCGCCCCAAGGGCGGGTTTTTTTACAGCTCTCCGAATTACGCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCa                                             <  1:8494332/150‑1 (MQ=255)

                                                                                                           ccccTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTCTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAg                                            <  1:8512920/150‑1 (MQ=255)

                                                                                                               ttCAGATGATGCATCACCCATAGAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGctc                                        <  2:4606345/150‑1 (MQ=255)

                                                                                                               ttCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGctc                                        >  1:2834070/1‑150 (MQ=255)

                                                                                                                tCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGctct                                       <  1:6387897/150‑1 (MQ=255)

                                                                                                                  aGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTg                                     >  1:2466212/1‑150 (MQ=255)

                                                                                                                    atgatgCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGaa                                   <  1:962366/150‑1 (MQ=255)

                                                                                                                    atgatgCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGaa                                   <  1:5498176/150‑1 (MQ=255)

                                                                                                                           aTCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCa                            <  2:1498675/150‑1 (MQ=255)

                                                                                                                                ccATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTc                       <  1:3509216/150‑1 (MQ=255)

                                                                                                                                 tgtAAAAAAACCCGCCCTTGTGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCg                      >  1:2540593/3‑150 (MQ=39)

                                                                                                                                  gtAAAAAAACCCGCCCTTGTGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAg                                                                   >  1:1781894/2‑104 (MQ=37)

                                                                                                                                  aTAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGa                     >  1:5109579/1‑150 (MQ=255)

                                                                                                                                  aTAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGa                     <  2:5632943/150‑1 (MQ=255)

                                                                                                                                     aaaaaaCCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATgg                  >  1:4179089/1‑150 (MQ=255)

                                                                                                                                     aaaaaaCCCGCCACAAGGGCGGGTTTTTTTACAGCTACCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATgg                  >  2:1381162/1‑150 (MQ=255)

                                                                                                                                      aaaaaCCCGCCCTTGTGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGcc                                                                                   >  1:6323625/1‑84 (MQ=37)

                                                                                                                                      aaaaaCCCGCCCTTGTGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGc                 >  1:1405536/1‑150 (MQ=39)

                                                                                                                                      aaaaaCCCGCCCTTGTGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTCTCAGGCTCTTGAAGCCGTCAGATTCGATGGc                 >  2:2790461/1‑150 (MQ=255)

                                                                                                                                      aaaaaCCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGc                 >  1:5534055/1‑150 (MQ=255)

                                                                                                                                       aaaaCCCGCCCCAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGACACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCt                <  1:2867959/150‑1 (MQ=255)

                                                                                                                                       aaaaCCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCcttc                                                  <  2:2559640/116‑1 (MQ=255)

                                                                                                                                       aaaaCCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCt                <  2:6105621/150‑1 (MQ=255)

                                                                                                                                       aaaaCCCGCCACAAGGGCGGGTTGTTTTACAGCTATACGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGTTGGCt                >  2:2210773/1‑150 (MQ=255)

                                                                                                                                        aatcccGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCtt               >  2:3779371/4‑150 (MQ=255)

                                                                                                                                        aaaCCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCtt               <  2:6865836/150‑1 (MQ=255)

                                                                                                                                        aaaCCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCtt               <  2:8123590/150‑1 (MQ=255)

                                                                                                                                           cccGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGa            <  2:29460/150‑1 (MQ=255)

                                                                                                                                            ccGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGaa           <  1:8000155/150‑1 (MQ=255)

                                                                                                                                                 acaAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCTGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGAAGTGTa      >  2:8737281/1‑150 (MQ=255)

                                                                                                                                                 acaAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGAAGTGTa      <  1:1470696/150‑1 (MQ=255)

                                                                                                                                                 acaAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGAAGTGTa      <  1:5659978/150‑1 (MQ=255)

                                                                                                                                                 acaAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGAAGTGTa      >  1:6087604/1‑150 (MQ=255)

GCAAAATGTGAAAAGCCTGCGCGGTCGCCTTGTAGGAGCGGGTTCACCCGCGAACACGGGCAAAGCCCGTGCCATTCACCCTACAGTCGGTTTCGCAGGCAATCCCGCCCCTTCAGATGATGCATCACCCATAAAAAAACCCGCCACAAGGGCGGGTTTTTTTACAGCTATCCGAATTACTCCGGACGAACCTGTGCAGCCTGCATGCCCTTCTGGCCGCGCTCGGCGACGAAGGAAACAGTCTGGCCTTCTTTCAGGCTCTTGAAGCCGTCAGATTCGATGGCTTTGAAGTGTACGAA  >  NC_002947/2810364‑2810662

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`