Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,892,403 T→C 6.6% R58G (AGG→GGG)  PP_2544 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,892,4030TC 6.6% 653.0 / 22.3 229R58G (AGG→GGG) PP_2544hypothetical protein
Reads supporting (aligned to +/- strand):  ref base T (92/109);  new base C (2/13);  total (107/122)
Fisher's exact test for biased strand distribution p-value = 1.51e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.44e-01

Only 100 of 234 total aligned reads displayed.

ACCATGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCA  >  NC_002947/2892254‑2892552
                                                                                                                                                     |                                                                                                                                                     
aCCATGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCt                                                                                                                                                       >  2:7264777/1‑150 (MQ=255)
   aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTgg                                                                                                                                                    >  1:4822049/1‑150 (MQ=255)
   aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTgg                                                                                                                                                    <  2:7295876/150‑1 (MQ=255)
   aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTgg                                                                                                                                                    >  1:6352468/1‑150 (MQ=255)
   aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTgg                                                                                                                                                    >  1:5238648/1‑150 (MQ=255)
    tGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTggg                                                                                                                                                   <  1:2541925/150‑1 (MQ=255)
      gCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGa                                                                                                                                                 >  2:6899027/1‑150 (MQ=255)
           cATGCCTGACTACCAGATCCTGGTCATTTCCCCCGGTATCGCGGCGGCGTTGGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGAACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCgg                                                                                                                                            <  1:3796937/150‑1 (MQ=255)
           cATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCgg                                                                                                                                            <  2:8135904/150‑1 (MQ=255)
            aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGc                                                                                                                                           <  2:5648433/150‑1 (MQ=255)
            aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGc                                                                                                                                           >  2:5333615/1‑150 (MQ=255)
            aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTGGGGACCCGGc                                                                                                                                           >  1:1915502/1‑150 (MQ=255)
             tGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGcc                                                                                                                                          <  1:748308/150‑1 (MQ=255)
              gCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCg                                                                                                                                         >  1:2996608/1‑150 (MQ=255)
               ccTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGCCGt                                                                                                                                        <  1:3644377/150‑1 (MQ=255)
                cTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCggg                                                                                                                                       >  1:5483453/1‑148 (MQ=255)
                cTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGtt                                                                                                                                       >  1:8915205/1‑150 (MQ=255)
                 tGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGttt                                                                                                                                      >  1:7862238/1‑150 (MQ=255)
                 tGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGttt                                                                                                                                      >  1:5729952/1‑150 (MQ=255)
                 tGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTGGGGACCCGGCCGttt                                                                                                                                      >  1:4899689/1‑150 (MQ=255)
                  gACTACCATATCCTGTTCATTTCCACGGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGCCGTTTc                                                                                                                                     <  2:7370320/150‑1 (MQ=255)
                  gACTACCAGATCCTGGTCTTTTCCACGGGTATCGCTGGGGGGGTCGTGGGGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTACGGGTCACTCGCATCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGCCGTTTc                                                                                                                                     <  2:2920377/150‑1 (MQ=255)
                  gACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTc                                                                                                                                     <  2:1268223/150‑1 (MQ=255)
                   aCTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTcg                                                                                                                                    <  1:7196750/150‑1 (MQ=255)
                       ccAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAccc                                                                                                                                              <  1:5307631/136‑1 (MQ=255)
                       ccAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAccc                                                                                                                                              >  2:5307631/1‑136 (MQ=255)
                        cAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCgttg                                                                                                                               >  2:1567871/1‑150 (MQ=255)
                        cAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCATGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCgttg                                                                                                                               >  2:777190/1‑150 (MQ=255)
                        aaGATCCTGGTCATTTCCACCGGTATCGGTGAGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAATCGTCACTCGGCTCTGGAAACTGCCGGCTGCCTTGGGGACCCGGCCGTTTGGGgttg                                                                                                                               >  2:3138376/2‑150 (MQ=255)
                          gATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAGCgttgtt                                                                                                                             >  2:3335023/1‑150 (MQ=255)
                           aTCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTACGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGttgttg                                                                                                                            <  1:957866/150‑1 (MQ=255)
                           aTCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGttgttg                                                                                                                            <  1:4079674/150‑1 (MQ=255)
                            tCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTgg                                                                                                                           <  2:8732878/150‑1 (MQ=255)
                             ccTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTggg                                                                                                                          >  2:3943924/1‑150 (MQ=255)
                              cTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGc                                                                                                                         >  2:2209255/1‑150 (MQ=255)
                               tGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTGGTTGGGcc                                                                                                                        >  2:4836115/1‑150 (MQ=255)
                                ggTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTTGGCCt                                                                                                                       >  1:4230884/1‑150 (MQ=255)
                                  tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTgg                                                                                                                     <  2:2424931/150‑1 (MQ=255)
                                  tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGGTGGGCCTgg                                                                                                                     >  1:6684988/1‑150 (MQ=255)
                                      ttCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCtt                                                                                                                 >  2:4538249/1‑150 (MQ=255)
                                       tCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGCTCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCttt                                                                                                                <  2:8193038/150‑1 (MQ=255)
                                       tCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCttt                                                                                                                <  2:5664570/150‑1 (MQ=255)
                                        ccACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCtttt                                                                                                               >  2:6048366/1‑150 (MQ=255)
                                             ggTATCGCTGCGGCGGTCGTGGTGGCGTTGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCCGCACTACGCTTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGc                                                                                                          <  1:216353/150‑1 (MQ=255)
                                             ggTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGc                                                                                                          <  1:1567871/150‑1 (MQ=255)
                                                agcGCTGCGGCGGTCGTGGGGGCGCGGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTGTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCggg                                                                                                       <  1:3178747/148‑1 (MQ=255)
                                                aTCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCggg                                                                                                       <  2:4400660/150‑1 (MQ=255)
                                                     tGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTggg                                                                                                                                                   <  1:1690520/101‑1 (MQ=255)
                                                     tGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTggg                                                                                                                                                   >  2:1690520/1‑101 (MQ=255)
                                                     tGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCAtgt                                                                                                  <  1:369022/150‑1 (MQ=255)
                                                       cggcggTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCATTTTCTGCGGGCATGTgg                                                                                                <  2:8524614/150‑1 (MQ=255)
                                                         gcggTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCggg                                                                                                       >  2:5587269/1‑141 (MQ=255)
                                                          cggTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGaaa                                                                                             <  2:655679/150‑1 (MQ=255)
                                                               gtggtgGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTg                                                                                        <  2:3426967/150‑1 (MQ=255)
                                                               gtggtgGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTg                                                                                        <  2:5005299/150‑1 (MQ=255)
                                                                tggtggCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTgg                                                                                       <  1:6048366/150‑1 (MQ=255)
                                                                tggtggCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTgg                                                                                       <  1:3348440/150‑1 (MQ=255)
                                                                      cGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATc                                                                                 <  1:1035729/150‑1 (MQ=255)
                                                                       gATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATcc                                                                                <  2:6742467/150‑1 (MQ=255)
                                                                       gATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTGGGCCAGGGCTTTTTCTTCGGGCCTGTGGAAAAGCTGGTTAAtac                                                                                >  2:1156885/1‑148 (MQ=255)
                                                                         tGGGTGTGGTGCACCAGATCCGCCCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCAc                                                                              <  2:323855/150‑1 (MQ=255)
                                                                            gtgtGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGt                                                                           <  2:3736400/150‑1 (MQ=255)
                                                                               tggtgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGaa                                                                        <  1:2889469/150‑1 (MQ=255)
                                                                                ggtgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAAc                                                                       <  1:3975627/150‑1 (MQ=255)
                                                                                 gtgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAAcc                                                                      >  2:6979044/1‑150 (MQ=255)
                                                                                  tgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCg                                                                     <  1:5821313/150‑1 (MQ=255)
                                                                                      ccAGATCAGCTCTGGTAGCAAGCAGCACTAAGCGACACTCGCCTCTGGAAACGGCCGGCACCCGTGGGGACCCGGCCGTTTCGCCTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCAGGGTCATCCACGGGGTACCGATCa                                                                 >  2:5147013/1‑150 (MQ=255)
                                                                                       ccgATCCGATCTGGTAGCATGCTGCACTAAGCGTCAGTCGCATGTGTAAAGGGCGGGCTCCCTGGGGGACCCGGCATTTTGGCTTTGTTGGGCGTGGGATTTTTGTGCGGGCATTTTGAAACGCTGGTTCATCCACGGTGACCCGAGCAg                                                                <  2:6627205/148‑1 (MQ=255)
                                                                                           tCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCt                                                            <  1:8753125/150‑1 (MQ=255)
                                                                                              gCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCCTGTGGAAACGCTGGTTCATACACGGTGAACCGAGCAGGGCTGcc                                                         >  2:469152/1‑150 (MQ=255)
                                                                                                tctGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTGGCGGTTTTTGGGCGGGGCTTTTTATGCGGGCCTGTGGAAACGCAGGTTAAAACACCGTGAAACCACCAGGGCTGCCGc                                                       >  1:6235270/1‑150 (MQ=255)
                                                                                                   ggTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCATGGGGACCCGGCCGTGTGGGCTTGTTGGGCCGGGGGGTTTTGTTCGGGGAGGTGGGAAACCTGGTTAATCCACCCTGAACCCAGCCCGGCGGCCGCAGc                                                    >  1:7916089/1‑150 (MQ=255)
                                                                                                    gTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCGTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGGACCGAGCAGGGCTGCCGCAGCg                                                   >  2:203066/1‑150 (MQ=255)
                                                                                                        caagcaGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCa                                               <  1:6278857/150‑1 (MQ=255)
                                                                                                          agcagcACTACGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCGTGGTCTGCGGGCCTGGGGACACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAgg                                             >  2:5831917/1‑150 (MQ=255)
                                                                                                             agcaCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGcc                                          <  2:1932406/150‑1 (MQ=255)
                                                                                                               caCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGCCCCGGCCGGTTCGCGGTGTTTGGGCGGGGCGTTTTGTGCGGGGAGGTGGTAACGCTGGGTAATCCACGGGGTAACCAGCCGGGCGGCCGCAGCGATCAGGGcccg                                        >  1:7265854/1‑148 (MQ=255)
                                                                                                                  tAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGAt                                     >  2:5154839/1‑150 (MQ=255)
                                                                                                                   aaGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATg                                    <  1:9118957/150‑1 (MQ=255)
                                                                                                                   aaGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATg                                    <  1:532913/150‑1 (MQ=255)
                                                                                                                       gTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAGCGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGa                                >  1:9101386/1‑150 (MQ=255)
                                                                                                                       gTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCCGGGCTGCCGCAGCGATCAGGGCCAGGTTggagt                                >  1:6843742/1‑147 (MQ=255)
                                                                                                                       gTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGa                                <  1:1209335/150‑1 (MQ=255)
                                                                                                                       gTCACTCGCCTCTGGAAACGGCCGGCTCCCCGGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGa                                <  1:6555373/150‑1 (MQ=255)
                                                                                                                        tCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAg                               <  1:8377201/150‑1 (MQ=255)
                                                                                                                         cACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAgg                              <  1:1412475/150‑1 (MQ=255)
                                                                                                                          aCTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAggg                             <  1:2520127/150‑1 (MQ=255)
                                                                                                                          aCTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAggg                             <  1:777190/150‑1 (MQ=255)
                                                                                                                            tCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGGTTCGCGGTGGGGGGCCTGGGCGTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGCACCGAGCAGGGCTGCCGCAGCGAGCAGGGCCAGGATGGCGAGGGCg                           >  2:6635011/1‑150 (MQ=255)
                                                                                                                              gCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAGCGGTGTTGGGCCGGGGCTTTTTATTCGGGCATGTGGAAAAGCTGGTTAATCCACGGTGAACCCAGCAGGGCTGCCGCAGCCATCAGGGCCAGGATGGCGAGGGCggg                         >  2:412872/1‑148 (MQ=255)
                                                                                                                                  ctGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAg                     <  1:8327846/150‑1 (MQ=255)
                                                                                                                                  ctGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAg                     <  2:3553193/150‑1 (MQ=255)
                                                                                                                                    ggAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGt                   <  2:2516379/150‑1 (MQ=255)
                                                                                                                                          ggccgggTCCCCAAGGGAGCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCAc             >  1:6781982/1‑150 (MQ=255)
                                                                                                                                          ggccggcTCCCTTGGGGACCCGGCCGTTTAGCGTTGTTTGGCCTGGGCTTTTTCTGCGGGCATGTGGAAAAGCTGGTTAATCCACGGTGAAACGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTGAc             >  1:8185931/1‑150 (MQ=255)
                                                                                                                                            ccggcTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGTCAGGATGGCGAGGGCGATGTAGGTCTTCACgg           <  1:8697638/150‑1 (MQ=255)
                                                                                                                                                 tCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTg      >  2:3273589/1‑150 (MQ=255)
                                                                                                                                                    cTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGGGGAAACGCAGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTgcgc   >  2:1834532/1‑150 (MQ=255)
                                                                                                                                                     ttGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCa  >  2:573003/1‑150 (MQ=255)
                                                                                                                                                     ttGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCa  <  1:6899027/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCATGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCA  >  NC_002947/2892254‑2892552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑