BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,892,405	G→A	6.0%	P57L (CCA→CTA) ‡	PP_2544 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,892,405	0	G	A	6.0%	677.4 / 19.7	218	P57L (CCA→CTA) ‡	PP_2544	hypothetical protein
Reads supporting (aligned to +/- strand): ref base G (99/104); new base A (2/11); total (103/115)
Fisher's exact test for biased strand distribution p-value = 2.20e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01

Only 100 of 231 total aligned reads displayed.

CATGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCA  >  NC_002947/2892256‑2892552

cATGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTg                                                                                                                                                     >  1:4213523/1‑150 (MQ=255)

 aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTgg                                                                                                                                                    >  1:4822049/1‑150 (MQ=255)

 aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTgg                                                                                                                                                    >  1:6352468/1‑150 (MQ=255)

 aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTgg                                                                                                                                                    <  2:7295876/150‑1 (MQ=255)

 aTGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTgg                                                                                                                                                    >  1:5238648/1‑150 (MQ=255)

  tGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTggg                                                                                                                                                   <  1:2541925/150‑1 (MQ=255)

      cTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAcc                                                                                                                                               >  2:5153780/1‑150 (MQ=255)

        tCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAccc                                                                                                                                              <  1:3284850/149‑1 (MQ=255)

        tCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCg                                                                                                                                             <  1:2620566/150‑1 (MQ=255)

         cATGCCTGACTACCAGATCCTGGTCATTTCCCCCGGTATCGCGGCGGCGTTGGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGAACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCgg                                                                                                                                            <  1:3796937/150‑1 (MQ=255)

         cATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCgg                                                                                                                                            <  2:8135904/150‑1 (MQ=255)

          aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGc                                                                                                                                           <  2:5648433/150‑1 (MQ=255)

          aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGc                                                                                                                                           >  2:5333615/1‑150 (MQ=255)

          aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTGGGGACCCGGc                                                                                                                                           >  1:1915502/1‑150 (MQ=255)

          aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGG‑TCCCCAAGGGAGCCGGcc                                                                                                                                          <  1:1515588/150‑1 (MQ=255)

           tGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGcc                                                                                                                                          <  1:748308/150‑1 (MQ=255)

           tGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGcc                                                                                                                                          <  1:914723/150‑1 (MQ=255)

            gCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCg                                                                                                                                         >  1:2996608/1‑150 (MQ=255)

             ccTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGt                                                                                                                                        >  2:8327846/1‑150 (MQ=255)

              cTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCggg                                                                                                                                       >  1:5483453/1‑148 (MQ=255)

              cTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGtt                                                                                                                                       >  1:8915205/1‑150 (MQ=255)

               tGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGttt                                                                                                                                      >  1:5729952/1‑150 (MQ=255)

               tGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGttt                                                                                                                                      >  1:7862238/1‑150 (MQ=255)

                gACTACCAGATCCTGGTCTTTTCCACGGGTATCGCTGGGGGGGTCGTGGGGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTACGGGTCACTCGCATCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGCCGTTTc                                                                                                                                     <  2:2920377/150‑1 (MQ=255)

                gACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGGGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCTGCACTAAGCGTCACTCGCCTCTGTAAACGGCCGGGTCCCCAAGGGAGCCGGCCGTTTc                                                                                                                                     <  2:7371004/150‑1 (MQ=255)

                gACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTc                                                                                                                                     <  2:1268223/150‑1 (MQ=255)

                 aCTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTcg                                                                                                                                    <  1:7196750/150‑1 (MQ=255)

                     ccAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAccc                                                                                                                                              >  2:5307631/1‑136 (MQ=255)

                     ccAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAccc                                                                                                                                              <  1:5307631/136‑1 (MQ=255)

                     ccAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCgtt                                                                                                                                >  2:6740117/1‑150 (MQ=255)

                      cAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCATGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCgttg                                                                                                                               >  2:777190/1‑150 (MQ=255)

                      aaGATCCTGGTCATTTCCACCGGTATCGGTGAGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAATCGTCACTCGGCTCTGGAAACTGCCGGCTGCCTTGGGGACCCGGCCGTTTGGGgttg                                                                                                                               >  2:3138376/2‑150 (MQ=255)

                        gATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCgttgtt                                                                                                                             <  1:3692031/150‑1 (MQ=255)

                        gATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAGCgttgtt                                                                                                                             >  2:3335023/1‑150 (MQ=255)

                          tCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTgg                                                                                                                           <  2:8732878/150‑1 (MQ=255)

                           ccTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTggg                                                                                                                          >  2:3943924/1‑150 (MQ=255)

                            cTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGc                                                                                                                         >  2:2209255/1‑150 (MQ=255)

                              ggTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTTGGCCt                                                                                                                       >  1:4230884/1‑150 (MQ=255)

                                tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTgg                                                                                                                     <  2:2424931/150‑1 (MQ=255)

                                tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGGTGGGCCTgg                                                                                                                     >  1:6684988/1‑150 (MQ=255)

                                tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTGGGCCTgg                                                                                                                     >  2:1101065/1‑150 (MQ=255)

                                    ttCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCtt                                                                                                                 >  2:4538249/1‑150 (MQ=255)

                                     tCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCttt                                                                                                                <  2:5664570/150‑1 (MQ=255)

                                      ccACCGGTATCGCTGCTGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACACGCCTCTGGAAACGGCCCGCACCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCtttt                                                                                                               >  2:6227122/1‑150 (MQ=255)

                                      ccACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCtttt                                                                                                               >  2:6048366/1‑150 (MQ=255)

                                       tcggggTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGGTTCGCCGTGGTGGGCCTGGGCttttt                                                                                                              >  2:5720719/5‑150 (MQ=255)

                                         ccGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCt                                                                                                            <  2:6760073/150‑1 (MQ=255)

                                              agcGCTGCGGCGGTCGTGGGGGCGCGGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTGTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCggg                                                                                                       <  1:3178747/148‑1 (MQ=255)

                                              aTCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCggg                                                                                                       <  2:4400660/150‑1 (MQ=255)

                                                   tGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTggg                                                                                                                                                   <  1:1690520/101‑1 (MQ=255)

                                                   tGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCAtgt                                                                                                  <  2:1675949/150‑1 (MQ=255)

                                                     cggcggTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCATTTTCTGCGGGCATGTgg                                                                                                <  2:8524614/150‑1 (MQ=255)

                                                             gtggtgGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTg                                                                                        <  2:3426967/150‑1 (MQ=255)

                                                             gtggtgGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTg                                                                                        <  2:5005299/150‑1 (MQ=255)

                                                              tggtggCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTgg                                                                                       <  1:6048366/150‑1 (MQ=255)

                                                                gtggCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTATGCGGGCATGTGGAAACGCTGGtt                                                                                     >  1:3654791/1‑150 (MQ=255)

                                                                    cGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATc                                                                                 <  1:1035729/150‑1 (MQ=255)

                                                                       tGGGTGTGGTGCACCAGATCCGCCCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCAc                                                                              <  2:323855/150‑1 (MQ=255)

                                                                          gtgtGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGt                                                                           <  2:3736400/150‑1 (MQ=255)

                                                                              ggtgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAAc                                                                       <  1:3975627/150‑1 (MQ=255)

                                                                               gtgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGGTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAAcc                                                                      >  2:6979044/1‑150 (MQ=255)

                                                                                    ccAGATCAGCTCTGGTAGCAAGCAGCACTAAGCGACACTCGCCTCTGGAAACGGCCGGCACCCGTGGGGACCCGGCCGTTTCGCCTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCAGGGTCATCCACGGGGTACCGATCa                                                                 >  2:5147013/1‑150 (MQ=255)

                                                                                         tCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCt                                                            <  1:8753125/150‑1 (MQ=255)

                                                                                           cGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCGGGGCTTTTTATGCGGGCATGTGGAAACGCTGGTTCATCCAACGTGAACCGAGCCGGGCTGc                                                          >  1:2149135/1‑150 (MQ=255)

                                                                                            gCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCCTGTGGAAACGCTGGTTCATACACGGTGAACCGAGCAGGGCTGcc                                                         >  2:469152/1‑150 (MQ=255)

                                                                                              tctGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTGGCGGTTTTTGGGCGGGGCTTTTTATGCGGGCCTGTGGAAACGCAGGTTAAAACACCGTGAAACCACCAGGGCTGCCGc                                                       >  1:6235270/1‑150 (MQ=255)

                                                                                                 ggTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCATGGGGACCCGGCCGTGTGGGCTTGTTGGGCCGGGGGGTTTTGTTCGGGGAGGTGGGAAACCTGGTTAATCCACCCTGAACCCAGCCCGGCGGCCGCAGc                                                    >  1:7916089/1‑150 (MQ=255)

                                                                                                  gTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCGTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGGACCGAGCAGGGCTGCCGCAGCg                                                   >  2:203066/1‑150 (MQ=255)

                                                                                                      caagcaGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCa                                               <  1:6278857/150‑1 (MQ=255)

                                                                                                       aagcaGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCCTGGGGAAACGCTGGTTCATCCACGGTGAACCGCGCCGGGCTGCCGCcgcgcgcag                                              >  2:5446598/1‑145 (MQ=255)

                                                                                                        agcagcACTACGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCGTGGTCTGCGGGCCTGGGGACACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAgg                                             >  2:5831917/1‑150 (MQ=255)

                                                                                                          cagcaCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGc                                           <  1:8996261/150‑1 (MQ=255)

                                                                                                           agcaCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGcc                                          <  2:1932406/150‑1 (MQ=255)

                                                                                                             caCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGCCCCGGCCGGTTCGCGGTGTTTGGGCGGGGCGTTTTGTGCGGGGAGGTGGTAACGCTGGGTAATCCACGGGGTAACCAGCCGGGCGGCCGCAGCGATCAGGGcccg                                        >  1:7265854/1‑148 (MQ=255)

                                                                                                                tAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAGCGTTGTTGGGCCTGGGCGTTTTCTTCGGGGCTGTGGGAACGCTGGTTCAACCACCGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCCGGAt                                     >  1:5923579/1‑150 (MQ=255)

                                                                                                                 aaGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATg                                    <  1:9118957/150‑1 (MQ=255)

                                                                                                                  aGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTGGGGACCCGGCCGGGTCGCGGTGTTGGGCCTGGGCGTGTTCGGGGGGGCAGTGGTAAAGCTGGTTGATACCCGGGGCACCGGGCCGGGCTGCCGCCGCGCTCAGGGGCACGATgg                                   >  2:1565151/1‑150 (MQ=255)

                                                                                                                     gTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCCGGGCTGCCGCAGCGATCAGGGCCAGGTTggagt                                >  1:6843742/1‑147 (MQ=255)

                                                                                                                     gTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGa                                <  1:1209335/150‑1 (MQ=255)

                                                                                                                     gTCACTCGCCTCTGGAAACGGCCGGCTCCCCGGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGa                                <  1:6555373/150‑1 (MQ=255)

                                                                                                                      tCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAg                               <  1:8377201/150‑1 (MQ=255)

                                                                                                                       cACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAgg                              <  1:1412475/150‑1 (MQ=255)

                                                                                                                        aCTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAggg                             <  1:777190/150‑1 (MQ=255)

                                                                                                                        aCTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAggg                             <  1:2520127/150‑1 (MQ=255)

                                                                                                                          tCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGGTTCGCGGTGGGGGGCCTGGGCGTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGCACCGAGCAGGGCTGCCGCAGCGAGCAGGGCCAGGATGGCGAGGGCg                           >  2:6635011/1‑150 (MQ=255)

                                                                                                                            gCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAGCGGTGTTGGGCCGGGGCTTTTTATTCGGGCATGTGGAAAAGCTGGTTAATCCACGGTGAACCCAGCAGGGCTGCCGCAGCCATCAGGGCCAGGATGGCGAGGGCggg                         >  2:412872/1‑148 (MQ=255)

                                                                                                                              ctctGGAAACGGGCGGCTCCCTTGGGGTCCCGTACTTTTCTCGTTTTTTGGCCTGGGCTTTTTCTGCGGGCTTGTGTTTACGCTTGTTCTTCCTCTTTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGACAGGATGTGGAggtctattt                       <  2:4796269/150‑8 (MQ=255)

                                                                                                                              ctctGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACCCTGGTTCATCCACGGTGAACCGAGCCGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGt                       >  2:7098352/1‑150 (MQ=255)

                                                                                                                                ctGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAg                     <  2:3553193/150‑1 (MQ=255)

                                                                                                                                ctGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAg                     <  1:5333615/150‑1 (MQ=255)

                                                                                                                                ctGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAg                     <  1:8327846/150‑1 (MQ=255)

                                                                                                                                  ggAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGt                   <  2:2516379/150‑1 (MQ=255)

                                                                                                                                      aCGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGCTGGAGGTCTTc               >  2:6585603/1‑150 (MQ=255)

                                                                                                                                      aCGGCCGGCTCCCCTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTc               <  1:8575588/150‑1 (MQ=255)

                                                                                                                                        ggccgggTCCCCAAGGGAGCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCAc             >  1:6781982/1‑150 (MQ=255)

                                                                                                                                        ggccggcTCCCTTGGGGACCCGGCCGTTTAGCGTTGTTTGGCCTGGGCTTTTTCTGCGGGCATGTGGAAAAGCTGGTTAATCCACGGTGAAACGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTGAc             >  1:8185931/1‑150 (MQ=255)

                                                                                                                                               tCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTg      <  1:4966037/150‑1 (MQ=255)

                                                                                                                                               tCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTg      >  2:3273589/1‑150 (MQ=255)

                                                                                                                                                  cTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGGGGAAACGCAGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTgcgc   >  2:1834532/1‑150 (MQ=255)

                                                                                                                                                   ttGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCa  <  1:6899027/150‑1 (MQ=255)

CATGGCCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCGCGTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCACGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCA  >  NC_002947/2892256‑2892552

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`