BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	2,892,410	C→G	6.9%	G55G (GGG→GGC)	PP_2544 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	2,892,410	0	C	G	6.9%	723.2 / 32.5	218	G55G (GGG→GGC)	PP_2544	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (96/107); new base G (4/11); total (100/118)
Fisher's exact test for biased strand distribution p-value = 1.79e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.22e-01

Only 100 of 225 total aligned reads displayed.

CCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCATGCAAG  >  NC_002947/2892261‑2892558

ccTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAc                                                                                                                                                         >  1:8359659/1‑150 (MQ=255)

ccTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAc                                                                                                                                                         <  2:4269800/150‑1 (MQ=255)

 cTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGAcc                                                                                                                                                        >  2:5153780/1‑150 (MQ=255)

   tCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCg                                                                                                                                                      <  1:2620566/150‑1 (MQ=255)

    cATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCgg                                                                                                                                                     >  2:5308828/1‑150 (MQ=255)

    cATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCgg                                                                                                                                                     <  2:8135904/150‑1 (MQ=255)

    cATGCCTGACTACCAGATCCTGGTAATTTCCACCGGTATCGCTGCGGGGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCgg                                                                                                                                                     <  1:3796826/150‑1 (MQ=255)

     aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGc                                                                                                                                                    <  2:8840498/150‑1 (MQ=255)

     aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGc                                                                                                                                                    <  2:5648781/150‑1 (MQ=255)

     aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGG‑TCCCCAAGGGAGCCGGcc                                                                                                                                                   <  1:1515588/150‑1 (MQ=255)

     aTGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCCGCTACCTTCGGGCCCCCGc                                                                                                                                                    >  1:1915253/1‑150 (MQ=255)

      tGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGcc                                                                                                                                                   <  1:914723/150‑1 (MQ=255)

        ccTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGCCGt                                                                                                                                                 <  1:3644377/150‑1 (MQ=255)

        ccTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGCCGt                                                                                                                                                 <  1:8256585/150‑1 (MQ=255)

          tGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGttt                                                                                                                                               >  1:7862337/1‑150 (MQ=255)

           gACTACCAGATCCTGGTCTTTTCCACGGGTATCGCTGGGGGGGTCGTGGGGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTACGGGTCACTCGCATCTGGAAACGGCCGGGTCCCCAAGGGAGCCGGCCGTTTc                                                                                                                                              <  2:2920377/150‑1 (MQ=255)

           gACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGGGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCTGCACTAAGCGTCACTCGCCTCTGTAAACGGCCGGGTCCCCAAGGGAGCCGGCCGTTTc                                                                                                                                              <  2:7371004/150‑1 (MQ=255)

                ccAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑gtt                                                                                                                                       >  1:324370/1‑150 (MQ=255)

                ccAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑gtt                                                                                                                                       >  2:6740117/1‑150 (MQ=255)

                 cAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCATGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑gttg                                                                                                                                      >  2:777190/1‑150 (MQ=255)

                 aaGATCCTGGTCATTTCCACCGGTATCGGTGAGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAATCGTCACTCGGCTCTGGAAACTGCCGGCTGCCTTGGGGACCCGGCCGTTTGG‑G‑gttg                                                                                                                                      >  2:3138376/2‑150 (MQ=255)

                   gATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAG‑C‑gttgtt                                                                                                                                    >  2:3335023/1‑150 (MQ=255)

                     tCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTgg                                                                                                                                  <  1:5253861/150‑1 (MQ=255)

                     tCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTgg                                                                                                                                  <  1:681207/150‑1 (MQ=255)

                      ccTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTggg                                                                                                                                 >  2:3943924/1‑150 (MQ=255)

                       cTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGc                                                                                                                                <  1:4887064/150‑1 (MQ=255)

                        tGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTGGGcc                                                                                                                               >  2:2301944/1‑150 (MQ=255)

                        tGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCACCCATGGGGACCCGGCCGTTTAG‑C‑GTTGTTGGGcc                                                                                                                               >  1:6760073/1‑150 (MQ=255)

                         ggTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTTGGCCt                                                                                                                              >  1:4230884/1‑150 (MQ=255)

                           tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTgg                                                                                                                            <  2:2424931/150‑1 (MQ=255)

                           tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGGTGGGCCTgg                                                                                                                            >  1:6684988/1‑150 (MQ=255)

                           tCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTGGGCCTgg                                                                                                                            >  2:1101065/1‑150 (MQ=255)

                                tCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGCTCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCttt                                                                                                                       <  2:8193038/150‑1 (MQ=255)

                                tCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCttt                                                                                                                       >  2:6004558/1‑150 (MQ=255)

                                    ccGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCt                                                                                                                   <  2:6760073/150‑1 (MQ=255)

                                     cGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCGTTGGGACCCCGCCGGTTGGCC‑GTTTTTGGGCGGGGGGttttatg                                                                                                                   >  1:298037/1‑147 (MQ=255)

                                      ggTATCGCTGCGGCGGTCGTGGTGGCGTTGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCCGCACTACGCTTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGc                                                                                                                 <  1:216353/150‑1 (MQ=255)

                                       gTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCg                                                                                                                >  2:3008086/1‑150 (MQ=255)

                                              tGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCAtgt                                                                                                         >  2:7307134/1‑150 (MQ=255)

                                              tGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCAtgt                                                                                                         <  1:369022/150‑1 (MQ=255)

                                                  gcggTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCggg                                                                                                              <  1:5587269/141‑1 (MQ=255)

                                                    ggTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAG‑C‑GTTGTTTGGGCGGGGGTTTTTATGAGGGCATGTTGAAAc                                                                                                   >  1:7005449/1‑150 (MQ=255)

                                                        gtggtgGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTg                                                                                               <  2:3426967/150‑1 (MQ=255)

                                                        gtggtgGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTTTTTGGGCGGGGGTTTTTCTGCGGGCCAGTGGaaaaccag                                                                                               >  1:1919548/1‑145 (MQ=255)

                                                          ggtggCGTTGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGt                                                                                             <  1:3016497/150‑1 (MQ=255)

                                                           gtggCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAG‑G‑GGTGTTGGGGCTGGGGTTTTTGTGGGGGGCTGGGGGAACGCTGGtt                                                                                            >  1:7963242/1‑150 (MQ=255)

                                                               cGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATc                                                                                        <  1:1035729/150‑1 (MQ=255)

                                                                  tGGGTGTGGTGCACCAGATCCGCCCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑c                                                                                    <  2:323855/150‑1 (MQ=255)

                                                                         ggtgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAAc                                                                             <  1:3975627/150‑1 (MQ=255)

                                                                          gtgCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAAcc                                                                            >  2:6979044/1‑150 (MQ=255)

                                                                             cACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAg                                                                         <  1:7440878/150‑1 (MQ=255)

                                                                             cACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCCGCTAACAAGGGGACCCGGCCGTTTGG‑CGGTGGTTGGGCGTGGGTGTTTATTGGGGGC‑CGTGGAAAAGCTTGTTGAACCACCGGTGaccacg                                                                          >  1:7663018/1‑145 (MQ=255)

                                                                               ccAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCa                                                                       >  2:5009883/1‑150 (MQ=255)

                                                                                       gCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCCTGTGGAAACGCTGGTTCATACA‑CGGTGAACCGAGCAGGGCTGcc                                                               >  2:469152/1‑150 (MQ=255)

                                                                                         tctGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTGG‑C‑GGTTTTTGGGCGGGGCTTTTTATGCGGGCCTGTGGAAACGCAGGTTAAAACA‑CCGTGAAACCACCAGGGCTGCCGc                                                             >  1:6235270/1‑150 (MQ=255)

                                                                                            ggTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGc                                                          <  2:1511194/150‑1 (MQ=255)

                                                                                             gTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCGTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGGACCGAGCAGGGCTGCCGCAGCg                                                         >  2:203066/1‑150 (MQ=255)

                                                                                               agcaagcaGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGAt                                                       <  2:4847709/150‑1 (MQ=255)

                                                                                                 caagcaGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCa                                                     <  1:6278857/150‑1 (MQ=255)

                                                                                                  aagcaGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAg                                                    <  2:359264/150‑1 (MQ=255)

                                                                                                  aagcaGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTGGGCCGGGGCGTTTTCTGCGGGCCTGTGGAAACGCTGGGTCATCCA‑CGGTGAACCGAGCCGGGCTGCCGCcgcgcgcag                                                    >  2:5446597/1‑145 (MQ=255)

                                                                                                   agcagcACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTGG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAgg                                                   >  2:1242439/1‑150 (MQ=255)

                                                                                                   agcagcACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAgg                                                   <  2:4486261/150‑1 (MQ=255)

                                                                                                     cagcaCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGc                                                 <  1:7264777/150‑1 (MQ=255)

                                                                                                      agcaCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGcc                                                <  2:1932406/150‑1 (MQ=255)

                                                                                                      agcaCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGcc                                                <  2:5635282/150‑1 (MQ=255)

                                                                                                       gcaCTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCa                                               <  1:6034321/150‑1 (MQ=255)

                                                                                                          cTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGa                                            >  1:9106594/1‑150 (MQ=255)

                                                                                                            aaGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATg                                          <  1:532913/150‑1 (MQ=255)

                                                                                                             aGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATACA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATgg                                         >  2:6166871/1‑150 (MQ=255)

                                                                                                              gCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGc                                        <  1:6146636/150‑1 (MQ=255)

                                                                                                              gCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGc                                        <  2:5238648/150‑1 (MQ=255)

                                                                                                                gTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGa                                      <  1:1209335/150‑1 (MQ=255)

                                                                                                                gTCACTCGCCTCTGGAAACGGCCGGCTCCCCGGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGa                                      <  1:6555373/150‑1 (MQ=255)

                                                                                                                 tCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAg                                     <  1:8377214/150‑1 (MQ=255)

                                                                                                                  cACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAgg                                    <  1:1412475/150‑1 (MQ=255)

                                                                                                                   aCTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAggg                                   <  1:7837280/150‑1 (MQ=255)

                                                                                                                     tCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGGTTCG‑C‑GGTGGGGGGCCTGGGCGTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGCACCGAGCAGGGCTGCCGCAGCGAGCAGGGCCAGGATGGCGAGGGCg                                 >  2:6635011/1‑150 (MQ=255)

                                                                                                                      cGCCTCTGGACACGGCCGGCGCCCTGGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTGTTCTGCGGGCATGTGGAAACGCTGGGTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGa                                <  2:8514091/150‑1 (MQ=255)

                                                                                                                       gCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGAt                               <  1:5789657/150‑1 (MQ=255)

                                                                                                                       gCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTAG‑C‑GGTGTTGGGCCGGGGCTTTTTATTCGGGCATGTGGAAAAGCTGGTTAATCCA‑CGGTGAACCCAGCAGGGCTGCCGCAGCCATCAGGGCCAGGATGGCGAGGGCggg                               >  2:412872/1‑148 (MQ=255)

                                                                                                                         ctctGGAAACGGGCGGCTCCCTTGGGGTCCCGTACTTTTCT‑C‑GTTTTTTGGCCTGGGCTTTTTCTGCGGGCTTGTGTTTACGCTTGTTCTTCCT‑CTTTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGACAGGATGTGGAggtctattt                             <  2:4796269/150‑8 (MQ=255)

                                                                                                                         aacgcgAAACGGCCGGGTCCCCAAGGGAGCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGt                             >  2:8567173/6‑150 (MQ=38)

                                                                                                                           ctGGACACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAg                           <  1:5423510/150‑1 (MQ=255)

                                                                                                                           ctGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAg                           <  2:3553193/150‑1 (MQ=255)

                                                                                                                             ggAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGt                         <  2:2516379/150‑1 (MQ=255)

                                                                                                                                 aCGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCCTGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGGCGCAGCGAGCAGGGCCCGGATGGCGAGGGCGCTGGTGGTCTTc                     >  2:5704413/1‑150 (MQ=255)

                                                                                                                                 aCGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGCTGGAGGTCTTc                     >  2:6585603/1‑150 (MQ=255)

                                                                                                                                     ccggcTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGTCAGGATGGCGAGGGCGATGTAGGTCTTCACgg                 <  1:8697638/150‑1 (MQ=255)

                                                                                                                                     ccggcTCCCTTGGGGACCCGGCCGTTTCG‑C‑GGTGTTGGGCCGGGGCTTTTTCTTGGGGGCTGTGGGAACGCAGGTTAATACA‑CCGGGGAACGAGCAGGGCTGCCCCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACgg                 >  1:888970/1‑150 (MQ=255)

                                                                                                                                          tCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTg            <  1:4966037/150‑1 (MQ=255)

                                                                                                                                          tCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTg            >  2:3273589/1‑150 (MQ=255)

                                                                                                                                          tCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CCGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTg            >  1:8956908/1‑150 (MQ=255)

                                                                                                                                             ccaagggAGCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCAACCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTgcgc         >  2:1653900/5‑150 (MQ=255)

                                                                                                                                             cTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCAGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATAAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCAAGGGCGTgcgc         >  2:1834488/1‑150 (MQ=255)

                                                                                                                                              ttGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCa        >  2:573003/1‑150 (MQ=255)

                                                                                                                                              ttGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCa        <  1:6899027/150‑1 (MQ=255)

                                                                                                                                              caagggAGCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCa        >  1:9032993/4‑150 (MQ=255)

                                                                                                                                                 gtgACCCTGCCGTTTCG‑A‑TTTGTTGGGCCTGGGATTTTTCTGCTGTCATGTGGAAAAGCTTGTTCATACA‑CGTTGAACCTAGCAGGGCTGCAGAAGCTATCAGGGACAGGATGGCGAGGGCGATGTATGTCTTCACGGGCGTGCGCATGc     <  2:6354615/148‑1 (MQ=255)

                                                                                                                                                 gggACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCATGc     <  1:2481016/150‑1 (MQ=255)

CCTTCATGCCTGACTACCAGATCCTGGTCATTTCCACCGGTATCGCTGCGGCGGTCGTGGTGGCGATGGGTGTGGTGCACCAGATCCGCTCTGGTAGCAAGCAGCACTAAGCGTCACTCGCCTCTGGAAACGGCCGGCTCCCTTGGGGACCCGGCCGTTTCG‑C‑GTTGTTGGGCCTGGGCTTTTTCTGCGGGCATGTGGAAACGCTGGTTCATCCA‑CGGTGAACCGAGCAGGGCTGCCGCAGCGATCAGGGCCAGGATGGCGAGGGCGATGTAGGTCTTCACGGGCGTGCGCATGCAAG  >  NC_002947/2892261‑2892558

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`