Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 2,938,378 C→G 6.1% Y149* (TAC→TAG PP_2569 → MHS family metabolite MFS transporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029472,938,3780CG 6.1% 750.7 / 28.0 230Y149* (TAC→TAGPP_2569MHS family metabolite MFS transporter
Reads supporting (aligned to +/- strand):  ref base C (87/126);  new base G (11/3);  total (101/129)
Fisher's exact test for biased strand distribution p-value = 9.74e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.93e-01

Only 100 of 233 total aligned reads displayed.

ACCATTGTCATCATGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTGGGGCTGGCG  >  NC_002947/2938229‑2938527
                                                                                                                                                     |                                                                                                                                                     
  cATTGTCATCATGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGt                                                                                                                                                     >  2:7772844/1‑150 (MQ=255)
  cATTGTCATCATGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGt                                                                                                                                                     >  1:7488710/1‑150 (MQ=255)
  cATTGTCATCATGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCAACCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGAGGCCACCTACGt                                                                                                                                                     >  2:2669825/1‑150 (MQ=255)
         atcatGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAg                                                                                                                                              >  2:8713684/1‑150 (MQ=255)
          tcatGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGc                                                                                                                                             <  1:4506707/150‑1 (MQ=255)
          tcatGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGc                                                                                                                                             >  2:179100/1‑150 (MQ=255)
          tcagGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCTCGGCCACGTAGGTGGCCgcgc                                                                                                                                             <  2:8221640/150‑1 (MQ=255)
              gggCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATgc                                                                                                                                         >  1:2213319/1‑150 (MQ=255)
                 ccTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGcc                                                                                                                                      >  1:7483330/1‑150 (MQ=255)
                   tGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCa                                                                                                                                    >  2:3456933/1‑150 (MQ=255)
                   tGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCa                                                                                                                                    >  2:7891397/1‑150 (MQ=255)
                    gTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCaa                                                                                                                                   <  2:6779444/150‑1 (MQ=255)
                      ccACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAgg                                                                                                                                 <  1:26716/150‑1 (MQ=255)
                        aCCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGgc                                                                                                                               <  2:2708912/150‑1 (MQ=255)
                        aCCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGgc                                                                                                                               >  2:811824/1‑150 (MQ=255)
                                ggtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCgg                                                                                                                       <  2:7169227/150‑1 (MQ=255)
                                ggtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCgg                                                                                                                       <  1:7684334/150‑1 (MQ=255)
                                ggtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCgg                                                                                                                       <  1:1315423/150‑1 (MQ=255)
                                ggtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCgg                                                                                                                       <  1:7138892/150‑1 (MQ=255)
                                ggtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCgg                                                                                                                       <  1:9134375/150‑1 (MQ=255)
                                ggtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCgg                                                                                                                       <  2:6045347/150‑1 (MQ=255)
                                ggtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCgg                                                                                                                       <  2:6045465/150‑1 (MQ=255)
                                 gtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGc                                                                                                                      >  1:4926517/1‑150 (MQ=255)
                                 gtggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGc                                                                                                                      <  2:1973775/150‑1 (MQ=255)
                                  tggGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCt                                                                                                                     <  2:632318/150‑1 (MQ=255)
                                      gctgctACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCttttt                                                                                                                 <  1:4346215/150‑1 (MQ=255)
                                      gctgctACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCttttt                                                                                                                 >  2:4562147/1‑150 (MQ=255)
                                             ccGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGcc                                                                                                          <  2:7344803/150‑1 (MQ=255)
                                              cGGGCAACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCAAACTGGCCGAGCAATCGCCCAAGTGCCCCCGCGGCTTTTTAAcaggct                                                                                                         >  2:31174/1‑145 (MQ=255)
                                                 gCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGa                                                                                                      <  2:6686789/150‑1 (MQ=255)
                                                  cTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGAt                                                                                                     <  1:8169361/150‑1 (MQ=255)
                                                      gCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAg                                                                                                 <  1:6955758/150‑1 (MQ=255)
                                                      gCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTAAGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAg                                                                                                 >  2:4043856/1‑150 (MQ=255)
                                                       cctcgttCGGTGTGGCCGCGCCGATCATCCTGATCACACTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAga                                                                                                <  1:3902143/144‑1 (MQ=255)
                                                       ccACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAga                                                                                                <  1:4063095/150‑1 (MQ=255)
                                                       ccACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAga                                                                                                <  1:8506983/150‑1 (MQ=255)
                                                       ccACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAga                                                                                                <  1:2341794/150‑1 (MQ=255)
                                                       ccACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAga                                                                                                <  1:1192636/150‑1 (MQ=255)
                                                        cACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCCTGCGCCCAAGGGCCGCCCCGGCTTTTTCACTGCCAGGATCCAgac                                                                                               >  1:1398653/1‑150 (MQ=255)
                                                        cACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAgac                                                                                               >  2:5860563/1‑150 (MQ=255)
                                                        cACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCAACGTGGCCGAGCATGCGCCCAACGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAgac                                                                                               >  1:7859752/1‑150 (MQ=255)
                                                                     gCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTg                                                                                  >  2:445482/1‑150 (MQ=255)
                                                                     gCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTg                                                                                  <  2:3236704/150‑1 (MQ=255)
                                                                        gcgcCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTCCGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTgggg                                                                               <  1:4442857/150‑1 (MQ=255)
                                                                        gcgcCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTgggg                                                                               <  2:5401481/150‑1 (MQ=255)
                                                                             gATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCCTGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGtt                                                                          >  2:126954/1‑150 (MQ=255)
                                                                              atcatcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTTCGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTc                                                                         <  1:8232775/150‑1 (MQ=255)
                                                                              atcatcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTc                                                                         <  1:6169960/150‑1 (MQ=255)
                                                                              atcatcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTc                                                                         <  1:8951674/150‑1 (MQ=255)
                                                                                catcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCt                                                                       <  1:560688/150‑1 (MQ=255)
                                                                                catcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCt                                                                       <  2:8578009/150‑1 (MQ=255)
                                                                                catcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGGGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCt                                                                       <  1:8903682/150‑1 (MQ=255)
                                                                                 atcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTg                                                                      <  1:3137073/150‑1 (MQ=255)
                                                                                 atcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTg                                                                      >  2:576605/1‑150 (MQ=255)
                                                                                 atcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTg                                                                      >  2:1760368/1‑150 (MQ=255)
                                                                                  tcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGGTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGt                                                                     >  2:118776/1‑150 (MQ=255)
                                                                                  tcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTgg                                                                     >  2:3197122/1‑149 (MQ=255)
                                                                                  tcCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGt                                                                     <  1:1937689/150‑1 (MQ=255)
                                                                                     tGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCgc                                                                  <  2:4923678/150‑1 (MQ=255)
                                                                                     tGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCgc                                                                  >  1:8241330/1‑150 (MQ=255)
                                                                                      gATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCCCCGACGTGGCCGAGCCAGCGCCCCAGGGCCCCCCCGGCTTTTTGACAGCCAGGATACACACCCCAGCCACCCACGGGCTGTTCCAGTCgct                                                                 >  1:8679245/1‑150 (MQ=255)
                                                                                       aTCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCgctg                                                                >  2:6686016/1‑150 (MQ=255)
                                                                                        tCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCgctgc                                                               <  2:5075641/150‑1 (MQ=255)
                                                                                          aCCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGctgctg                                                             <  2:1280518/150‑1 (MQ=255)
                                                                                          aCCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGctgctg                                                             <  2:3517418/150‑1 (MQ=255)
                                                                                          aCCCTGCGCGTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGctgctg                                                             <  2:823933/150‑1 (MQ=255)
                                                                                          aCCCTGCGCGTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGctgctg                                                             <  1:7890801/150‑1 (MQ=255)
                                                                                            ccTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGt                                                           <  2:2193867/150‑1 (MQ=255)
                                                                                            ccTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGt                                                           >  2:5189597/1‑150 (MQ=255)
                                                                                            ccTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCAGGt                                                           >  2:4934042/1‑150 (MQ=255)
                                                                                            ccTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCAACCTGGCCCAGCATGCCCCCAAAGGCCCCCCCGGCTTTTTAACAGCCTGGATCCAGACGACAGCCACCCGGGGGCTGTTACTGTCGCTGCGGGt                                                           >  1:6436570/1‑150 (MQ=255)
                                                                                              tGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGa                                                         <  1:2894646/150‑1 (MQ=255)
                                                                                                  cTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCAt                                                     <  1:5713605/150‑1 (MQ=255)
                                                                                                   ttGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATg                                                    <  2:3817564/150‑1 (MQ=255)
                                                                                                    tgctgcAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATgg                                                   <  1:8000607/150‑1 (MQ=255)
                                                                                                       tgcAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCt                                                <  2:1981429/150‑1 (MQ=255)
                                                                                                               cTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACg                                        <  2:5450370/150‑1 (MQ=255)
                                                                                                                tGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACgg                                       <  1:423037/150‑1 (MQ=255)
                                                                                                                    gcTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTAACTGCCTGGATCCAGACGACTGCCACCCAGGGGCTGTTCCTGTCGCAGCTGGTGATCAAGGCCTGTCGCACGGCCAt                                   >  1:6699965/1‑150 (MQ=255)
                                                                                                                      tGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATgg                                 <  2:7321482/150‑1 (MQ=255)
                                                                                                                        ggCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGAt                                                        <  1:676835/125‑1 (MQ=255)
                                                                                                                          cGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACGGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGAc                             <  1:3180700/150‑1 (MQ=255)
                                                                                                                              gAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGaa                         <  1:179100/150‑1 (MQ=255)
                                                                                                                              gAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGACTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGaa                         <  2:5837744/150‑1 (MQ=255)
                                                                                                                                    ggcggcGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCGGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTc                   >  2:1900098/1‑150 (MQ=255)
                                                                                                                                      atgctcggcCACGTAGGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGa                 >  2:898735/6‑150 (MQ=255)
                                                                                                                                       tgctcggcCACGTAGGTGGCCGCGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAg                >  1:3007196/5‑150 (MQ=255)
                                                                                                                                       tgctcggcCACGTAGGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAg                >  1:7745082/5‑150 (MQ=255)
                                                                                                                                          tcggcCACGTAGGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGcc             >  1:5887910/2‑150 (MQ=255)
                                                                                                                                          tcggcCACGTAGGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGcc             >  1:4368310/2‑150 (MQ=255)
                                                                                                                                          tcggcCACGTAGGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATAATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGcc             >  1:5887799/2‑150 (MQ=255)
                                                                                                                                          gcggcCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGACGCGTTCGAGGcc             >  2:7631813/1‑150 (MQ=255)
                                                                                                                                             gcCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTgg          <  1:5140779/150‑1 (MQ=255)
                                                                                                                                              ccACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTggg         <  1:7330610/150‑1 (MQ=255)
                                                                                                                                              ccACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTggg         >  1:6377424/1‑150 (MQ=255)
                                                                                                                                                  cTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTGGGGCTg     >  2:1532580/1‑150 (MQ=255)
                                                                                                                                                   tACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTGGGGCTgg    <  1:521132/150‑1 (MQ=255)
                                                                                                                                                    aCGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTGGGGCTGGc   <  1:3282886/150‑1 (MQ=255)
                                                                                                                                                     cGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTGGGGCTGGCg  >  1:8987383/1‑150 (MQ=255)
                                                                                                                                                     cGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTGGGGCTGGCg  <  1:3728486/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
ACCATTGTCATCATGGGCCTGTCCACCGCAGTGGTGGGGCTGCTACCGGGCTACGCCACGATCGGTGTGGCCGCGCCGATCATCCTGATCACCCTGCGCTTGCTGCAGGGGCTGGCGCTGGGCGGTGAGTACGGCGGCGCGGCCACCTACGTGGCCGAGCATGCGCCCAAGGGCCGCCGCGGCTTTTTCACTGCCTGGATCCAGACGACTGCCACCCTGGGGCTGTTCCTGTCGCTGCTGGTGATCATGGCCTGTCGCACGGCCATGGGGACGGAAGCGTTCGAGGCCTGGGGCTGGCG  >  NC_002947/2938229‑2938527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: