| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,055,178 | C→G | 7.5% | intergenic (+14/+32) | PP_2664 → / ← agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,055,178 | 0 | C | G | 7.5% | 420.5 / 5.3 | 169 | intergenic (+14/+32) | PP_2664/agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Reads supporting (aligned to +/- strand): ref base C (64/79); new base G (3/12); total (78/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.77e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 179 total aligned reads displayed.
GATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCG > NC_002947/3055029‑3055327 | gatgatCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTc > 2:3688558/1‑150 (MQ=255) tgatCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTcgc < 2:619321/150‑1 (MQ=255) tgatCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAAATCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTcgc < 1:2234520/150‑1 (MQ=255) gatCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTcgcg < 1:9030031/150‑1 (MQ=255) atCACGGTCAACTACAGCAACGATCTCACGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCgg < 1:3533900/150‑1 (MQ=255) atCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCgg < 2:8489565/150‑1 (MQ=255) atCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCgg < 1:7285503/150‑1 (MQ=255) tCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCggg < 2:5639936/150‑1 (MQ=255) cACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGt < 2:1544936/150‑1 (MQ=255) cACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGt < 2:2235200/150‑1 (MQ=255) cACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGt > 2:4225085/1‑150 (MQ=255) aCGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGtt < 1:2896317/150‑1 (MQ=255) tACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑a > 2:6504653/1‑150 (MQ=255) cAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAg < 1:5725212/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGc < 2:8395553/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCG‑AAGc < 1:5530293/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGAGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCgg > 1:5313582/1‑150 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATGCGGG‑TAGCGGcc > 2:3738059/1‑150 (MQ=255) cGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCTTAAGACCGATTAAACTCAAGACGGGGATGAGCCATCTGCTGGCCTGTGGCTTGGCATTGGGTTTGGCGGCTTCGGGGTTTTATCCGCG‑AAGCGGCCg < 2:4116805/150‑1 (MQ=255) ctcAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGGTTATCCCCC‑CAGCGGCCGGAAc > 1:6471672/1‑150 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCCCGGCGCGGGGTGTTCCGCG‑CAGCGGCCGGGACacc > 1:8400355/1‑148 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGGTGATACGCGAAACCGGCCGGacacc > 1:7007393/1‑146 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCATAGCGGGTTTATACGCG‑AAGCCGCCGGAACAGc > 1:7467806/1‑150 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTAGCCGCTTAGCGGGGTGATCCGCG‑AAGCGGCCGGAACAGc > 1:8663611/1‑150 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCG‑AAGc > 1:3869302/1‑136 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCG‑AAGc < 2:3869302/136‑1 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCG‑AAGc < 2:8258176/136‑1 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGGCGCGGGGTGGTCCGCG‑CAGCGGCCGGCACAGcgc > 1:3440478/1‑148 (MQ=255) ctgcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATTAAACTCAAGACGGCTATGAGCCATCTGCTGGCCCGTGGCTTGGCATAGCGTTTGGCCGCTTCGGGGGTTGAACCGCG‑ACGCGGCCGGAACAGCtat < 2:7903715/148‑3 (MQ=255) cagcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCa > 2:4683849/1‑150 (MQ=255) cagcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGTCGCGGGGTGATCCGCG‑AACCGGCCGGAACAGCTCa > 2:1058370/1‑150 (MQ=255) gcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCATCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAAc > 2:4327820/1‑150 (MQ=255) agATCCGCTAACTGGGTCACACGCTTTTGCACAAGCCCTTAAGACCTATGAAACTCAAGACGGCGTTGCGCCATGTGCTGGCCTTTGGCTTGGCATAGCGTTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACgg < 2:3510215/150‑1 (MQ=255) gATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTAGCGGGGTTTTACGCG‑AAGCGGCCGGGACAGCGCaaacgc > 1:8573869/1‑146 (MQ=255) gcgAACTGGGTCACACGTTGTTGCACAAGCCCGTAAGCCCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGa < 2:5643950/150‑1 (MQ=255) gcgAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCGGGTGGCGGGGTGTTGCCCG‑AAGCGGGCGGGACAGCGCAAACGCGCAGa > 1:2646568/1‑150 (MQ=255) gAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATa > 2:5245326/1‑150 (MQ=255) tGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTcgc > 2:3501665/1‑102 (MQ=255) gggTCACACGCTTATGAACAAGCCCTTATGACCTATGAAACTCAAGACGGGGTTGAGCCATGTGGTGGCCTGTGGCTTGGATTAGCGGTTGGCGGGTTCGGGGGTTGATCCGCG‑ACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAg < 2:202568/150‑1 (MQ=255) gggTCACACGCTGATGCACAAGCCCGTAAGACCGATGAACCTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAg < 2:3577895/150‑1 (MQ=255) ggTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGc > 2:5875618/1‑150 (MQ=255) cacaCGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTGCGCGGGTTGATCCGCG‑AAGCGGCCGGGACCGCTCAACGGCGCAGATAATCAGCaaa > 2:8789031/1‑150 (MQ=255) ccGCTGATGCACACGCCCGTACGCCCGATTAACCTCACGCCGGCGATGAGCCATCTGGTGGCCCGGGGCTTGGCATAGCGGTGGGCCGCGTGGCGGGTTGATCCGCG‑ACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATc < 2:4013582/149‑1 (MQ=255) acGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCACAACGGCGCAGATAAACAGCaaaaac > 2:765897/1‑148 (MQ=255) acGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATACGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATc > 2:6512024/1‑150 (MQ=255) acGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTAGCGGGTTGATACGCG‑AAGCGGCCGGAACAGCTCAACGGCGCCGATAAAAAGCaaaaac > 2:2421349/1‑148 (MQ=255) ggtgttGCACACGCCCGTACGTCGGTTGAACCTCTTGCGGGCGATGAGCCTGCTGCTGGCCTGGGGGTTGGCTTCGCGGTGGGCGGGTTGGGGGGTTGATCGGCG‑CAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 2:5007665/145‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCATGCCGGCGATGAGCCATCTGGGGGCCTGGGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 2:7737798/150‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACCGCGCCGATAAAAAGCAAAAACGa > 2:3422858/1‑150 (MQ=255) cTGATGCACACGCCCTTAAGACCTATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGAATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGat < 2:6968965/150‑1 (MQ=255) ttGCACAAGCCCGTACGACCGATGAAACTCAAGACGGCGATGAGCCATCTGGTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATc < 2:5453051/149‑1 (MQ=255) aTGCACATGCCCGTAAGACTGATGAAACTCAAGACGGGGATGTGCAATGTGCTGGCCAGTGGCTTGGCTTAGGGGTTGGCCGCTTCGCGGGTTTATCCGCG‑AAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATc < 2:5452960/150‑1 (MQ=255) acaAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATAAGCAAAAACGAAATCGccc > 2:6958742/1‑149 (MQ=255) aaGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGTGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGc > 1:4034971/1‑150 (MQ=255) cgccgttAAGACCGATGAAACTCACGCCGGCGATTCGCAATCTGCGGGCCAGTGGCTGGGAATAGGGTTTGGCCGGTGCGCGTGTTGATCCGCT‑CAGAGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCa < 2:7079352/144‑1 (MQ=255) cccGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATAACGCCAGCaag > 2:7566376/1‑148 (MQ=255) cGTAAGACCGATGAAACTCAATACGGCGATGATCCATCTGCTGGCCAGAGGCTTGGCATAGCGGTTGGCCGCGTCTCGGGTTGATACCCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCACCAAAAACGATAAAGCCAGAAATGa > 2:6740799/1‑150 (MQ=255) cGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGa < 2:4459393/150‑1 (MQ=255) cGTAAGACCGATGAAACTCAAGACGGCGAGGAGCCATCTGGTGGCCTGTGGGTTGGCTTAGCGGTGGGCGGCTTCGGGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGa < 2:2631874/150‑1 (MQ=255) aGACCGATGAAACTCAAGACGGCGATGAGCAATCTGCTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGAt < 1:7578763/150‑1 (MQ=255) cctttGAAACACACGCCGGCGTTGCGCCTTCTGGTGGCCTGGGTGTTGGCTTTGGGGTTGGCGGTTTGGGGGTTTGATCGGCT‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 1:945900/146‑1 (MQ=255) ccGATTAACCCCAAGCCGGCGATGAGCCATCTGGTGGCCTGTGGCTTGGCTTAGCGGTTGGCCGCTTCGGGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 2:2297923/150‑1 (MQ=255) ccGATGAAACTCATGACGGCTATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGGGTTTGGCCGCTTGGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 2:6280116/150‑1 (MQ=255) gATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:6001550/150‑1 (MQ=255) gATGAAACCCAAGCCGGCGATGAGCCAGCTGCTGCCCAGGGGCTTGGATTAGCGGTTGGCCGCTACGCGGGTTGACCCGCC‑CCGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:7246945/150‑1 (MQ=255) aCTCACGACGGCGATGAGCCATCTGCTGGCCAGTGGATTGGCTTCGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑ATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑Accc < 1:8212933/150‑1 (MQ=255) aCTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGGCGCGGGGTGTTCCCCG‑AACCGGCCGGCACAGCTCAACCGCGCCGATAATAAGCAAAAAAGATAAAGCCCCCACAGAGGATGGCgtgttacc > 1:2848276/1‑146 (MQ=255) aCTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGTCGCGGGGTGATACCCG‑CAGCGGCCCGGACACCGCAACGGCGCAGATAATAAGCCAAAAAGAGATCGCCCGCACGGGGGATGGCGTGT‑Aacc > 1:2847363/1‑150 (MQ=255) cTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCg < 2:8754694/150‑1 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGTTCCGCG‑AAGCGGCCCGCACAGCGCAACGGCGCAGATAATAAGCAAAAACGATATCGCCACCACTGAGGGTGGCGTGT‑Accccg > 2:2540365/1‑148 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATACGCG‑AAGCGGCCGGTACAGCTCAACGGCGCAGATAAACAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCgg > 2:8023189/1‑150 (MQ=255) aaGACGGCGATGTGCCATCTGCTGGCCTGGGGCTTGGCATTGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGtt < 1:8951140/150‑1 (MQ=255) gACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATCGCGGTTGGCCGCTTCGGGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTtgt < 2:6253905/150‑1 (MQ=255) ttgcgCCATGTGCGGGCCTGGGGGTTGGCATCGCGGTGGGCCGCTTCGGGGGTTGATCCGCG‑ACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACAtt < 1:5232755/146‑1 (MQ=255) gAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCA‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGa < 1:1260827/150‑1 (MQ=255) cATCTGCTGGCCTGTGGCTTGGCTTTGCGGTTGGCCGCTTCGGGGTTTGATCCGCG‑ACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGttt < 1:5100300/150‑1 (MQ=255) aTCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATAAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCCCATTGAGTTTg > 2:2116875/1‑150 (MQ=255) tgggggggCCTGTGGGTTGGCTTGGCGGTGGGCCGCTGCGGGGGTTTACCCGCG‑ACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTgc < 1:3910570/144‑1 (MQ=255) tCTGCGGCCCTGTGGTTTGCCTTCGGGGTTGGCCGGTTCGCGGTTTGAGCCGCG‑ACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTgc < 1:3910471/150‑1 (MQ=255) tgctgGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGGTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAAAAAGCAAAATAGATATCGCCCGCACGGAGGATGGGTTGT‑ACCCGGGTGTGCACAGTGGGTTTgcgc > 2:520380/1‑150 (MQ=255) ggCCTGGGGCTTGGATTCGGGTTTGGCCGCTTCGGGGTTTGACCCGCG‑ACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCaaaa < 1:6504653/150‑1 (MQ=255) cctgTGGCTTGGCTTTGGGGTGGGCCGCTCCGGGGTTTGACCCGCG‑ACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 1:4225085/147‑1 (MQ=255) cAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGAACCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCACCAAAAACGATATCGCCAGCACAGAGGATGGCTTGT‑ACCCGGTTGTTCACCGTGAGTTTGCGCAAAATCg > 2:6003399/1‑150 (MQ=255) aGTGGCTTGGCATAGCGGTTGGCCGCGTCGCCGGGTTATCCCCG‑AAGCGGCCCGAACAGCACAACGGCGCAGAAAAAAACCAAAAACCATATCGCCAGCACTGAGGATGGCTTTT‑AACCCGTTGTGCACAATGAGTTTGCGCACAAACGc > 2:8569487/1‑150 (MQ=255) tGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATACGCG‑AAGCGGCCGGAACAGCTCAAACGCGCAGATAATAAGCAAAATCGATAAAGCCAGCACTGAGGCTGGGTTGT‑ACCCCGGTGTGCCCCGTGAGTTTTCGCAAAATAGCCg > 2:4939249/1‑150 (MQ=255) tGGCTTGGCATAGCGGTTGGCCCCGTCGCGGGGTGTTCCGCG‑CAGCGGCCGGGCAACCACAACCGCGCCGATAATAAGCAAAAAAGATAAAGCCCCCACGGAGGGTGGCGTGTGACCCGG‑TGTTGACAGTGAGTTTTCGCAAAAACGccc > 2:2536911/1‑149 (MQ=255) ttGGCATCGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAAc < 2:4776056/150‑1 (MQ=255) gCATTGGGGTTGGCCGCTGCGGGGGTTTATCCGCT‑ACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTg < 1:469200/150‑1 (MQ=255) tAGCGGTTGGCCGCTGCGCGGGTTGAGCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATCTCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGc < 2:7841307/150‑1 (MQ=255) gtgggggtGGCCGCTTGGGGGGTGGAGCCGCG‑ATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAACTCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGc < 1:4001459/143‑1 (MQ=255) gTTGGCCGCTTCGGGGGTTGATCCGCG‑ACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGa < 1:8103607/150‑1 (MQ=255) gCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:2815319/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:3525467/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACAGTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:2390712/1‑150 (MQ=255) ttCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 1:4140771/1‑150 (MQ=255) ttCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:1070194/1‑150 (MQ=255) ttCGCGGATCAACCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 1:5022863/1‑150 (MQ=255) ttCGCGGATCAACCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:2341682/1‑150 (MQ=255) ttCGCGGATCAACCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGC‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:6431019/1‑150 (MQ=255) ttCGCGGATCAACCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGC‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:6431318/1‑150 (MQ=255) | GATGATCACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCG‑AAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGT‑ACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCG > NC_002947/3055029‑3055327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |