| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,055,185 | T→C | 10.0% | intergenic (+21/+25) | PP_2664 → / ← agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,055,185 | 0 | T | C | 10.0% | 445.8 / 30.2 | 162 | intergenic (+21/+25) | PP_2664/agmR | two‑component system sensor histidine kinase/response regulator/glycerol metabolism activator |
| Reads supporting (aligned to +/- strand): ref base T (67/75); new base C (10/6); total (77/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.97e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.54e-01 | |||||||||||
Only 100 of 164 total aligned reads displayed.
ACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3055036‑3055332 | cGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTAGCGGGttt > 1:2803053/1‑149 (MQ=255) ggTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGa < 1:3370882/150‑1 (MQ=255) tACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGa > 2:6504653/1‑150 (MQ=255) tACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGa > 2:5246178/1‑150 (MQ=255) aCAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGaa < 2:5789279/150‑1 (MQ=255) cAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAg < 1:5725212/150‑1 (MQ=255) aGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 1:5530293/150‑1 (MQ=255) cAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGCgg < 2:6619192/150‑1 (MQ=255) aCGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTGGCGGGTTGATCCGCGAATCgggc > 2:3738119/1‑148 (MQ=255) cGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCTTAAGACCGATTAAACTCAAGACGGGGATGAGCCATCTGCTGGCCTGTGGCTTGGCATTGGGTTTGGCGGCTTCGGGGTTTTATCCGCGAAGCGGCCg < 2:4116805/150‑1 (MQ=255) actcAAGCAGCTTATCCGCGACGTGGGCCACAGGCTTATGCACAAGCCCTTAAGACCGTTTAAACCAAAGACGGCTATGAGCCATCTGCTGGCCAGTGGCTTGGCTTAGGGGTTGGCCGCTTCGGGGGTTTATCCGCGAAGCGGCCGGaa < 2:4391410/149‑1 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGGCCCGGCGCGGGGTGTTCCGCGCAGCGGCCGGGACacc > 1:8400355/1‑148 (MQ=255) aaGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTAGCCGCTTAGCGGGGTGATCCGCGAAGCGGCCGGAACAGc > 1:8663611/1‑150 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc < 2:3869302/136‑1 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGATCAACCCGCGAAGc > 1:3869302/1‑136 (MQ=255) gcagcaGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGGCGCGGGGTGGTCCGCGCAGCGGCCGGCACAGcgc > 1:3440478/1‑148 (MQ=255) ctgcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATTAAACTCAAGACGGCTATGAGCCATCTGCTGGCCCGTGGCTTGGCATAGCGTTTGGCCGCTTCGGGGGTTGAACCGCGACGCGGCCGGAACAGCtat < 2:7903715/148‑3 (MQ=255) cagcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGACGCGGCCGGAACCGCTCa > 2:4684277/1‑150 (MQ=255) cagcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCa > 2:4683849/1‑150 (MQ=255) gcagATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCATCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAAc > 2:4327820/1‑150 (MQ=255) agATCCGCGAACTGGGTAACACGCTGATGCACAAGCCCTTAAGACCTTTTAAACTCAAGACGGCGATGAGCCATCTGGTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGGGGGTTTATCCGCGATGGGGCCGGAACAGCTCAACgg < 2:3510200/150‑1 (MQ=255) gcgAACTGGGTCACACGTTGTTGCACAAGCCCGTAAGCCCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGa < 2:5643950/150‑1 (MQ=255) tGGGTCACACTCTGTTGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATGTGGTGGCCTGTGGCTTGGCATTGGGTTTGGCCGCTTGGCGGGTTGATCGGCTATGCGGCCGGAACAGCTCAACGGCGCAGATAATCa < 2:6349223/150‑1 (MQ=255) tGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTGGCGGGGTGTTCCGCGCAGCGGCCCGGACCGCGCAAAGGCGCCGaaaaaaa > 1:7919756/1‑147 (MQ=255) gggTCACACGCTTATGAACAAGCCCTTATGACCTATGAAACTCAAGACGGGGTTGAGCCATGTGGTGGCCTGTGGCTTGGATTAGCGGTTGGCGGGTTCGGGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAg < 2:202568/150‑1 (MQ=255) cacaCGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTGCGCGGGTTGATCCGCGAAGCGGCCGGGACCGCTCAACGGCGCAGATAATCAGCaaa > 2:8789031/1‑150 (MQ=255) ccGCTGATGCACACGCCCGTACGCCCGATTAACCTCACGCCGGCGATGAGCCATCTGGTGGCCCGGGGCTTGGCATAGCGGTGGGCCGCGTGGCGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATc < 2:4013582/149‑1 (MQ=255) acGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTAGCGGGTTGATACGCGAAGCGGCCGGAACAGCTCAACGGCGCCGATAAAAAGCaaaaac > 2:2421349/1‑148 (MQ=255) ggtgttGCACACGCCCGTACGTCGGTTGAACCTCTTGCGGGCGATGAGCCTGCTGCTGGCCTGGGGGTTGGCTTCGCGGTGGGCGGGTTGGGGGGTTGATCGGCGCAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 2:5007665/145‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCATGCCGGCGATGAGCCATCTGGGGGCCTGGGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 2:7737798/150‑1 (MQ=255) gCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACCGCGCCGATAAAAAGCAAAAACGa > 2:3422858/1‑150 (MQ=255) gCTGATGAACAAGCCCTTAAGACCGATGAAACTCAAGACGGCGATGAGCAATCTGGTGGCCTGTGGCTGGGCATAGGGTTTGGCCGCTGCGCGGTTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGa < 2:7737089/150‑1 (MQ=255) cTGATGCACACGCCCTTAAGACCTATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGAATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGat < 2:6968965/150‑1 (MQ=255) tGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCCCGCAGCGGCCGGAAAAGCTCAACGGCGCCGATAAAAAGCAAAAAAGata > 1:738483/1‑150 (MQ=255) aTGCACATGCCCGTAAGACTGATGAAACTCAAGACGGGGATGTGCAATGTGCTGGCCAGTGGCTTGGCTTAGGGGTTGGCCGCTTCGCGGGTTTATCCGCGAAGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATc < 2:5452960/150‑1 (MQ=255) acaAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATAAGCAAAAACGAAATCGccc > 2:6958742/1‑149 (MQ=255) aaGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGTGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGc > 1:4034971/1‑150 (MQ=255) cgccgttAAGACCGATGAAACTCACGCCGGCGATTCGCAATCTGCGGGCCAGTGGCTGGGAATAGGGTTTGGCCGGTGCGCGTGTTGATCCGCTCAGAGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCa < 2:7079352/144‑1 (MQ=255) cGTAAGACCGTTGACACTCCTGACGGCGTTGAGCCTTCTGCTGGCCTGTGGGTTGGCATTGCGGTTGGCCGCTTGGCGGGTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGa < 2:5206571/150‑1 (MQ=255) cGTAAGACCGATGAAACTCAAGACGGCGAGGAGCCATCTGGTGGCCTGTGGGTTGGCTTAGCGGTGGGCGGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGa < 2:2631874/150‑1 (MQ=255) ttAAGACCGATTAAACTCAAGACGGCTATGAGCCATCTGCTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGGGGGTTTATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAg < 2:1015867/149‑1 (MQ=255) aGACCGATGAAACTCAAGACGGCGATGAGCAATCTGCTGGCCTGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGAt < 1:7578763/150‑1 (MQ=255) ccttttaaaCCCAAGACGGCTATGCGCCTTCTGCTGGCCTGGGGCTTGGATTCGGGGTGGGCGGCTGGGGGGGTTGACCCGCCACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 1:4081043/144‑1 (MQ=255) cctttGAAACACACGCCGGCGTTGCGCCTTCTGGTGGCCTGGGTGTTGGCTTTGGGGTTGGCGGTTTGGGGGTTTGATCGGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 1:945900/146‑1 (MQ=255) ccGATTAACCCCAAGCCGGCGATGAGCCATCTGGTGGCCTGTGGCTTGGCTTAGCGGTTGGCCGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 2:2297923/150‑1 (MQ=255) ccGATTAAACTCAATACGGCGATTAGCCATCTGCTGGCCATTGGCTGGGAATAGCGTTTGGCCGCTTCGCGGTTTGATCGGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 2:1578917/150‑1 (MQ=255) ccGATGAAACTCCAGACGGCGATGAGCCATCTGCGGGCCAGTGGCTTGGCATTGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAACATCGATATCGCCAGCACTGAGGATGGc < 2:741256/150‑1 (MQ=255) ccGATGAAACTCATGACGGCTATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGGGTTTGGCCGCTTGGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGc < 2:6280116/150‑1 (MQ=255) tataaaaCTCAGGAGGGGGTTGTGACATCTGGGGGCATGTGGTTTGGCTTAGGGGTGGGCCGGTTCGGGGTTTGATCGGCGATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:7187422/146‑1 (MQ=255) gATGAAACCCAAGCCGGCGATGAGCCAGCTGCTGCCCAGGGGCTTGGATTAGCGGTTGGCCGCTACGCGGGTTGACCCGCCCCGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCtt < 1:7246945/150‑1 (MQ=255) aCTCACGACGGCGATGAGCCATCTGCTGGCCAGTGGATTGGCTTCGCGGTTGGCCGCTTCGCGGGTTGATCCGCGATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTAccc < 1:8212933/150‑1 (MQ=255) aCTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGGCGCGGGGTGTTCCCCGAACCGGCCGGCACAGCTCAACCGCGCCGATAATAAGCAAAAAAGATAAAGCCCCCACAGAGGATGGCgtgttacc > 1:2848276/1‑146 (MQ=255) aCTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCGTCGCGGGGTGATACCCGCAGCGGCCCGGACACCGCAACGGCGCAGATAATAAGCCAAAAAGAGATCGCCCGCACGGGGGATGGCGTGTAacc > 1:2847363/1‑150 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGATACGCGAAGCGGCCGGTACAGCTCAACGGCGCAGATAAACAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCgg > 2:8023189/1‑150 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCATCGCGGGGTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGAAAAATCGATAAAGCCAGCACAGAGGATGGGGTGTACCCgg > 2:8333251/1‑150 (MQ=255) tCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCCCTTCGCGGGGTGTTCCGCGAAGCGGCCGGAACAGCTCAACGCCGCAGATAATCAGCAAAATCGATATAGCCAGCACTGAGGTTGGCTTGTTccccg > 2:2401263/1‑148 (MQ=255) aaGACGGCGATGTGCCATCTGCTGGCCTGGGGCTTGGCATTGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGtt < 1:8951140/150‑1 (MQ=255) gACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATCGCGGTTGGCCGCTTCGGGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtgt < 2:6253905/150‑1 (MQ=255) ttgcgCCATGTGCGGGCCTGGGGGTTGGCATCGCGGTGGGCCGCTTCGGGGGTTGATCCGCGACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACAtt < 1:5232755/146‑1 (MQ=255) tGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTg < 2:3593675/150‑1 (MQ=255) gAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCAAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGa < 1:1260827/150‑1 (MQ=255) cATCTGCTGGCCTGTGGCTTGGCTTTGCGGTTGGCCGCTTCGGGGTTTGATCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGttt < 1:5100300/150‑1 (MQ=255) cATCTGCTGGCCAGTGGGTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGttt < 1:6838045/150‑1 (MQ=255) aTCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATAAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCCCATTGAGTTTg > 2:2116875/1‑150 (MQ=255) tggggtgGCCTGTGGTTTGGATTTGGGGTTGGCGGGTTGGGGGTTTTATCCGCGAGGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc < 1:3910056/145‑1 (MQ=255) tCTGCGGCCCTGTGGTTTGCCTTCGGGGTTGGCCGGTTCGCGGTTTGAGCCGCGACGGGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTgc < 1:3910471/150‑1 (MQ=255) ggCCTGGGGCTTGGATTCGGGTTTGGCCGCTTCGGGGTTTGACCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCaaaa < 1:6504653/150‑1 (MQ=255) cctgTGGCTTGGCTTTGGGGTGGGCCGCTCCGGGGTTTGACCCGCGACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATc < 1:4225085/147‑1 (MQ=255) ccAGTGGCTTGGCATAGCGGTTGGGCGCTTCGCGGGGTGATACCCGGAGCGGCCGGCCCAGCGAAACGGCGCCGCTTAACACCAAAAAAGATATAGCCACCACGGGTGGTGGGGTGTGACCGGGTGTGGCCCATGAGTTTGGGCAAAATc > 2:2312028/1‑150 (MQ=255) cAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGGTGAACCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCACCAAAAACGATATCGCCAGCACAGAGGATGGCTTGTACCCGGTTGTTCACCGTGAGTTTGCGCAAAATCg > 2:6003399/1‑150 (MQ=255) aGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATAGATATCGCCCGCACTGAGGATGGCTTGTACCCGGTTGTGCACCTTGAGTTTGCGCAGAATCGc > 2:7582511/1‑150 (MQ=255) aGTGGCTTGGCATAGCGGTTGGCCGCGTCGCCGGGTTATCCCCGAAGCGGCCCGAACAGCACAACGGCGCAGAAAAAAACCAAAAACCATATCGCCAGCACTGAGGATGGCTTTTAACCCGTTGTGCACAATGAGTTTGCGCACAAACGc > 2:8569487/1‑150 (MQ=255) aGTGGCTTGGCATAGCGGTTGGCCGCATAGCGGGTTTATCCCCCAAGCGGCCCGAACACCGCAACCGCGCCGAAAAACACCAAAAACGAAAAAGCCACCACAGAGGATGGCTTGTAACCCGGTGTGGACAATGTGTTTTGGCaaaaaacc > 2:2358358/1‑146 (MQ=255) tGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTTTTCCGCCGAGCCGCCCGGACAGCTCAAACGCGCAGAAAAACATCAAAAAAGATATAGCCACCACAGAGGATTGCTTGTAACCCGTTTTTCACAAAGAGTTTTCGCaaaaaagccc > 2:2537219/1‑144 (MQ=255) tGGCTTGGCATAGCGGTTGGCCGCGTCGCGGGTTGATACGCGAAGCGGCCGGAACAGCTCAAACGCGCAGATAATAAGCAAAATCGATAAAGCCAGCACTGAGGCTGGGTTGTACCCCGGTGTGCCCCGTGAGTTTTCGCAAAATAGCCg > 2:4939249/1‑150 (MQ=255) ggCTTGGCATAGCGGTTGGCCCCGTAGCGGGTTTATCCGCCCACCCGCCCGAACAGCGCAACGGCGCCGATAATAACCCAAATCGATATAGCCCGCACGGCTGATTGGGTGTTACCCGTTGTGCCCCATGAGGTTTGGCaaaaaagccca > 2:8058474/1‑143 (MQ=255) ggCATAGCGGTTGGCCGCTTGGCGGGTTGAGCCGCTACGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGt < 1:5911686/150‑1 (MQ=255) cATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTgg < 1:9002327/150‑1 (MQ=255) gtgggggtGGCCGCTTGGGGGGTGGAGCCGCGATGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAACTCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGc < 1:4001459/143‑1 (MQ=255) gTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTATACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGa < 2:5048208/150‑1 (MQ=255) cggCCGCTTCGCGGATCAACCCGCGAAGCAGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACg > 2:5884041/2‑150 (MQ=255) ccGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtg > 1:5292625/1‑150 (MQ=255) cGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtgg > 2:2567669/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 1:2529105/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:3525467/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:3525144/1‑150 (MQ=255) gCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACggtggt > 2:2815319/1‑150 (MQ=255) cTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtg < 2:8542013/99‑1 (MQ=39) cTTCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTtg > 1:8542013/1‑99 (MQ=39) ttCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:1070194/1‑150 (MQ=255) ttCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 1:4141074/1‑150 (MQ=255) ttCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 1:5022863/1‑150 (MQ=255) ttCGCGGATCAACCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGCACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGttt > 2:6431318/1‑150 (MQ=255) cgcgGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCg > 1:5004614/1‑150 (MQ=255) cgGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGc < 1:6323056/150‑1 (MQ=255) cgGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGc < 2:5464578/150‑1 (MQ=255) cgGGTGGCTCCGCTAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGc < 2:4620606/150‑1 (MQ=255) gTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGTGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAt < 2:6471672/150‑1 (MQ=255) gTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAt < 2:4285552/150‑1 (MQ=255) gTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAt < 1:4684277/150‑1 (MQ=255) | ACGGTCAACTACAGCAACGATCTCAAGCAGCAGATCCGCGAACTGGGTCACACGCTGATGCACAAGCCCGTAAGACCGATGAAACTCAAGACGGCGATGAGCCATCTGCTGGCCAGTGGCTTGGCATAGCGGTTGGCCGCTTCGCGGGTTGATCCGCGAAGCGGCCGGAACAGCTCAACGGCGCAGATAATCAGCAAAATCGATATCGCCAGCACTGAGGATGGCTTGTACCCGGTTGTGCACATTGAGTTTGCGCAAAATCGCCGAAACGTGGGCCTTGACGGTGGTTTCGGCGAT > NC_002947/3055036‑3055332 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |