| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,056,696 | G→T | 8.0% | intergenic (‑206/+102) | PP_2666 ← / ← PP_2667 | hypothetical protein/ABC transporter permease |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,056,696 | 0 | G | T | 8.0% | 407.2 / 17.0 | 133 | intergenic (‑206/+102) | PP_2666/PP_2667 | hypothetical protein/ABC transporter permease |
| Reads supporting (aligned to +/- strand): ref base G (15/104); new base T (9/2); total (26/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.58e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 145 total aligned reads displayed.
GACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGAT > NC_002947/3056550‑3056845 | gacgaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCGGGCGGGGCGGCAGGGgcgcgccc > 2:71029/1‑148 (MQ=37)gacgaTAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAg < 2:158890/150‑1 (MQ=255) aGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGccc < 1:3412630/150‑1 (MQ=255) aGACAGTAAAGGCAGTACTAACGTAGTAGAGGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGccc < 1:238400/150‑1 (MQ=255) gACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGccct < 1:7060559/150‑2 (MQ=255) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGGCTTGCGGCGCGGAATGGCCGCGCCGCGGCCCCa > 2:8189364/1‑150 (MQ=38) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 2:7321948/150‑1 (MQ=255) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 2:2664842/150‑1 (MQ=255) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 1:7561717/150‑1 (MQ=255) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 2:7322236/150‑1 (MQ=255) aCAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCa < 1:2943825/150‑1 (MQ=255) cAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAg < 1:2615807/150‑1 (MQ=255) gTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCTGCGCGGccctttcg < 1:7260093/150‑6 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCGTGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 2:4777267/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCGTGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 2:8264827/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCGTGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 2:8264699/150‑1 (MQ=255) tGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCATTTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCg < 2:6181050/150‑1 (MQ=255) aGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGca < 2:816223/150‑1 (MQ=255) gTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGcat < 2:5665315/150‑1 (MQ=255) tACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGcatc > 2:3423867/1‑150 (MQ=255) cTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGcatcat < 2:7904610/150‑1 (MQ=255) aaaGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGc < 1:167858/150‑1 (MQ=255) agtagtAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCAt < 1:4682250/150‑1 (MQ=255) gtagtaGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATa < 1:7445164/150‑1 (MQ=255) agtagATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGa < 2:8555381/150‑1 (MQ=255) gtagATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGAt < 2:4890278/150‑1 (MQ=255) gtagATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGAt < 2:850296/150‑1 (MQ=255) aTGGCCGGGCGCCTGAAGGCAAGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCt < 2:5390960/150‑1 (MQ=255) tGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTg < 2:1678841/150‑1 (MQ=255) gCCGTGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCATCTGTCTTGCTCAATTTCTGAAATCTGGCGCGATCCCTGTGGGAGGGGCCTTGAGTCGCGATAGGGCCGCGCTGCGGCCCCAGGATCTCGGCATCATGCTTAGATTGCTggg < 2:3958174/150‑1 (MQ=38) gCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTggg < 2:7159885/150‑1 (MQ=255) gCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTggg < 1:4758481/150‑1 (MQ=255) gCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAAGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTggg < 1:6027001/150‑1 (MQ=255) ccGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTgggg < 2:1367019/150‑1 (MQ=255) cGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGc < 1:5758174/150‑1 (MQ=255) tGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGc < 1:7170230/150‑1 (MQ=255) aGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGc < 2:5155203/150‑1 (MQ=255) gCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCGGGGGGCGCGAAAGGGCCCCGCCGCCGGCCCACGACCCAGGCCTACAGCAAAGAGAGGTGGGGGCGCGTTTCGGccc > 2:8039057/1‑150 (MQ=12) ggAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATc < 1:3423867/150‑1 (MQ=255) agaCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATcgc < 1:8725451/150‑1 (MQ=255) aCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGa < 1:1621947/150‑1 (MQ=255) aCGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGa < 2:8043020/150‑1 (MQ=255) aGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAgg < 1:2698636/150‑1 (MQ=255) aGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCACAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAgg < 2:1503041/150‑1 (MQ=255) gTCGTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCcaca < 1:5192224/150‑1 (MQ=255) tCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGcatcat < 1:2707848/93‑1 (MQ=255) tCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGcatcat > 2:2707848/1‑93 (MQ=255) tCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGCATCTCGGCATCATGCATAGATTGCTGCGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCacac < 2:4693321/150‑1 (MQ=255) ttGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACgg < 2:1405951/150‑1 (MQ=255) ttttCTGACTGCGGGCGCGATCCCTGGGGGTGCGGCCTTGCGTCGCTAATGGGCCGCGCCGCGGCCCCAGTATCTCGGCATCATGCTTAGTTTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTacac < 1:4768829/149‑1 (MQ=37) aaGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGtt < 1:7374006/150‑1 (MQ=255) tGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCa < 2:3744908/150‑1 (MQ=255) tGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCa < 2:7814883/150‑1 (MQ=255) gtgGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGc > 2:4002415/1‑79 (MQ=255) gtgGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGc < 1:4002415/79‑1 (MQ=255) gCCTTGCGTCGCTAAAGGGCCCCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCa < 1:2146212/150‑1 (MQ=255) ccTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCAt > 1:4735724/1‑150 (MQ=255) cTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATg > 1:1211502/1‑150 (MQ=255) ttGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGc > 1:1851050/1‑150 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTg < 2:4349852/150‑1 (MQ=255) gCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGAGTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTg < 2:6121555/150‑1 (MQ=255) cGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgg < 1:5916664/150‑1 (MQ=255) gTCGCGAACGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATTTATTGCGGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTggg < 1:235858/150‑1 (MQ=255) tCGCGAATGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGAATAGTTTGCTGGGGCCGCTTTGCGGCCAACTCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 1:2281433/150‑1 (MQ=39) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 1:1256479/150‑1 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 1:8189364/150‑1 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg < 2:5501639/150‑1 (MQ=255) tCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTgggg > 1:7376415/1‑150 (MQ=255) gcgAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTc > 2:7663657/1‑117 (MQ=255) gAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCACTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTg > 1:4291042/1‑150 (MQ=255) ctggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGa > 1:6146965/4‑150 (MQ=255) ctggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGa > 2:6534075/4‑150 (MQ=255) aaaGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGa < 2:4248591/150‑1 (MQ=255) tggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGac > 2:4877242/3‑149 (MQ=255) tggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa > 1:611842/3‑150 (MQ=255) tggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa > 2:4672477/3‑150 (MQ=255) aaGGGCCGCGCAGCGGCCCCTGGATCTCGGCATCATGCATCGATTGCTGGGGCCGCTTTGCGGCCCAAGCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa < 1:809417/150‑1 (MQ=255) aaGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCTGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa < 2:8077949/150‑1 (MQ=255) aaGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa < 1:5851756/150‑1 (MQ=255) aaGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGaa < 2:2648258/150‑1 (MQ=255) ggggCCGCTGCGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAg > 2:1557214/2‑150 (MQ=255) aGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAg < 1:6796686/150‑1 (MQ=255) gCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTg > 2:2674130/1‑150 (MQ=255) gCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATGGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTg < 2:2427099/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCTTGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTTAAGGTGa < 2:1892830/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa > 1:7097507/1‑150 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:5400336/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:6474378/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:5212144/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:110933/150‑1 (MQ=255) ccGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGAGGTTGAAGGTGa < 2:7683305/150‑1 (MQ=255) ccGCGCAGCGCCCCCCGGATCTCGGCATCATGCATAGATTGCGGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGa < 1:71029/150‑1 (MQ=255) cgcgCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAg > 1:1758423/1‑150 (MQ=255) cgcgCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAg > 2:189367/1‑150 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg < 2:8811829/150‑1 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg > 1:3067795/1‑150 (MQ=255) gcgcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAgg < 1:3615540/150‑1 (MQ=255) gcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGAt > 2:1563965/1‑150 (MQ=255) gcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGAt > 2:8696433/1‑150 (MQ=255) gcAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGAt > 1:8909437/1‑150 (MQ=255) | GACGATAGACAGTAAATGCAGTACTAAAGTAGTAGATGGCCGGGCGCCTGAAGGCATGGAGACGCCCTAGGGAGCAACTGTCTTGCTCAATTTCTGAAAGCTGGCGCGATCCCTGTGGGAGCGGCCTTGCGTCGCGAAAGGGCCGCGCAGCGGCCCCAGGATCTCGGCATCATGCATAGATTGCTGGGGCCGCTTTGCGGCCCAATCGCGACACAAGGCCGCTCCCACACGGGTTACACGCCAGGTTTTCAGCGCGGCTTGCGCAGCGCTGCATGCTGGGGGTTGAAGGTGAGGAT > NC_002947/3056550‑3056845 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |