Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 3,121,738 G→C 5.0% L304L (CTC→CTG)  PP_2736 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029473,121,7380GC 5.0% 742.7 / 20.3 219L304L (CTC→CTG) PP_2736hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (108/99);  new base C (2/9);  total (110/109)
Fisher's exact test for biased strand distribution p-value = 3.27e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 219 total aligned reads displayed.

CCTGCGCCGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAACACCACA  >  NC_002947/3121590‑3121885
                                                                                                                                                    |                                                                                                                                                   
 cTGCGCCGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAg                                                                                                                                                   >  2:8565143/1‑150 (MQ=255)
 cTGCGCCGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAg                                                                                                                                                   >  2:7074068/1‑150 (MQ=255)
  tGCGCCGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGc                                                                                                                                                  >  1:3594603/1‑150 (MQ=255)
   gcgcCGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCt                                                                                                                                                 <  1:7833009/150‑1 (MQ=255)
    cgcCGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTCGCCTGGGCCAGCTg                                                                                                                                                <  1:841987/150‑1 (MQ=255)
      ccGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTCGCCTGGGCCAGCTgga                                                                                                                                              <  2:4378560/150‑2 (MQ=255)
      ccGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCAAGGCGGTAGTTCCAGCTCGCCTGGGCCAGCTgga                                                                                                                                              <  2:7184506/150‑2 (MQ=255)
       cGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTCGCCTGGGCCAGCTggaa                                                                                                                                             <  2:6856324/150‑3 (MQ=255)
        gggTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTCGCCTGGGCCAGCTggaac                                                                                                                                            <  2:8113978/150‑4 (MQ=255)
         ggTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTggcggc                                                                                                                                           >  2:5322457/1‑150 (MQ=255)
         ggTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTggcggc                                                                                                                                           <  1:4037796/150‑1 (MQ=255)
          gTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGgcggcg                                                                                                                                          <  2:6450971/150‑1 (MQ=255)
           tCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGt                                                                                                                                         <  1:8082397/150‑1 (MQ=255)
           tCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGt                                                                                                                                         <  2:7717868/150‑1 (MQ=255)
           tCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGt                                                                                                                                         >  1:1369374/1‑150 (MQ=255)
              aTCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATAGCTTGCAGAATGTTGATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGgc                                                                                                                                      >  2:3485458/1‑150 (MQ=255)
              aTCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGgc                                                                                                                                      <  1:7246851/150‑1 (MQ=255)
              aTCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGgc                                                                                                                                      <  2:5612253/150‑1 (MQ=255)
              aTCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGgc                                                                                                                                      <  1:2799357/150‑1 (MQ=255)
                      ggTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACg                                                                                                                              >  1:2239080/1‑150 (MQ=255)
                      ggTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACg                                                                                                                              >  1:2354974/1‑150 (MQ=255)
                       gTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACgg                                                                                                                             <  1:1704379/150‑1 (MQ=255)
                            gTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATc                                                                                                                        >  1:744570/1‑150 (MQ=255)
                            gTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATc                                                                                                                        <  1:4458924/150‑1 (MQ=255)
                             ttGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCg                                                                                                                       >  1:6668063/1‑150 (MQ=255)
                                  gCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATg                                                                                                                  >  1:4129626/1‑150 (MQ=255)
                                    tCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATgca                                                                                                                >  2:6103090/1‑150 (MQ=255)
                                      aCGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATgcagc                                                                                                              >  2:3106625/1‑150 (MQ=255)
                                          aGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCTGCAGACGGGTATCGGTATGCAGcacca                                                                                                          >  2:5535879/1‑150 (MQ=255)
                                           gAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGcaccac                                                                                                         <  2:3567342/150‑1 (MQ=255)
                                           gAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGcaccac                                                                                                         <  2:3567222/150‑1 (MQ=255)
                                              ggTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCAcgtc                                                                                                      <  2:2385089/150‑1 (MQ=255)
                                              ggTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCAcgtc                                                                                                      >  2:2006797/1‑150 (MQ=255)
                                                ttGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCAcgtcgt                                                                                                    >  1:2670836/1‑150 (MQ=255)
                                                  gTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTg                                                                                                  <  1:3008592/150‑1 (MQ=255)
                                                   tCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGc                                                                                                 <  1:3689574/150‑1 (MQ=255)
                                                     ggTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTg                                                                                               >  1:5924599/1‑150 (MQ=255)
                                                      gTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTgg                                                                                              >  2:7833711/1‑150 (MQ=255)
                                                             gATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATc                                                                                       <  2:2143922/150‑1 (MQ=255)
                                                             gATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATc                                                                                       >  2:6229443/1‑150 (MQ=255)
                                                                 ccTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATg                                                                                   <  1:9152513/150‑1 (MQ=255)
                                                                 ccTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATg                                                                                   <  1:1594189/150‑1 (MQ=255)
                                                                   ttGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGgc                                                                                 >  2:522035/1‑150 (MQ=255)
                                                                      cAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCAGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCt                                                                              >  2:4252416/1‑150 (MQ=255)
                                                                        gAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGa                                                                            >  2:3749452/1‑150 (MQ=255)
                                                                        gAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGa                                                                            <  2:7888667/150‑1 (MQ=255)
                                                                        gAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGa                                                                            <  2:1834891/150‑1 (MQ=255)
                                                                        gAATGTTCATGTTGGAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATCCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGa                                                                            <  2:3908371/150‑1 (MQ=255)
                                                                         aaTGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAg                                                                           >  1:6409421/1‑150 (MQ=255)
                                                                           tGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGTCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTa                                                                         <  2:4507916/150‑1 (MQ=255)
                                                                            gTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTAc                                                                        >  2:6547360/1‑150 (MQ=255)
                                                                             ttCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACg                                                                       >  2:5159581/1‑150 (MQ=255)
                                                                             ttCAAGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTCTGCAGCACCACGTCGTTGCTGGCGTCATCGATGGCGCTGAGTACg                                                                       >  2:1331869/1‑150 (MQ=255)
                                                                                  gttgtAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGgcgcg                                                                  >  2:8927806/1‑150 (MQ=255)
                                                                                    tgtAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCt                                                                >  1:3782887/1‑150 (MQ=255)
                                                                                       aGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCt                                                             <  1:3485686/150‑1 (MQ=255)
                                                                                       aGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCt                                                             <  1:3376481/150‑1 (MQ=255)
                                                                                         gTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTCTCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTgg                                                           >  2:5144015/1‑150 (MQ=255)
                                                                                         gTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTgg                                                           >  2:6094853/1‑150 (MQ=255)
                                                                                         gTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTgg                                                           >  1:2451083/1‑150 (MQ=255)
                                                                                          tCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTCTGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGt                                                          >  2:2551830/1‑150 (MQ=255)
                                                                                              cgcgGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCt                                                      >  1:2164749/1‑150 (MQ=255)
                                                                                                 ggcggGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTggg                                                   <  1:4910793/150‑1 (MQ=255)
                                                                                                 ggcggGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTggg                                                   <  2:7726811/150‑1 (MQ=255)
                                                                                                 ggcggGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTggg                                                   <  1:9075552/150‑1 (MQ=255)
                                                                                                  gcggGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTgggg                                                  <  2:7465302/150‑1 (MQ=255)
                                                                                                    gggAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGtt                                                >  1:1976035/1‑150 (MQ=255)
                                                                                                       aGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTggagaaccc                                             <  1:7756701/150‑8 (MQ=255)
                                                                                                         cccGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCca                                           <  2:1232694/150‑1 (MQ=255)
                                                                                                         cccGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCca                                           <  1:6149472/150‑1 (MQ=255)
                                                                                                          ccGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTCTCGGTATGCAGCACCACGTCGTGGCTGGCGGCCTCGCTGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTGCTCcag                                          >  2:8304717/1‑150 (MQ=255)
                                                                                                           cGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCTGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCcagc                                         <  1:5535879/150‑1 (MQ=255)
                                                                                                           cGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCcagc                                         >  1:1441374/1‑150 (MQ=255)
                                                                                                            gCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCcagca                                        <  1:4806621/150‑1 (MQ=255)
                                                                                                              tCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGt                                      <  1:5123637/150‑1 (MQ=255)
                                                                                                              tCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGGAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGt                                      <  2:2894311/150‑1 (MQ=255)
                                                                                                                      gccCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGc                              >  1:8905846/1‑150 (MQ=255)
                                                                                                                        ccAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCt                            >  1:3829764/1‑150 (MQ=255)
                                                                                                                           ggCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCACTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGAt                         >  1:675858/1‑150 (MQ=255)
                                                                                                                            gCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATc                        <  1:5583017/150‑1 (MQ=255)
                                                                                                                              ggTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGc                      >  1:7622768/1‑150 (MQ=255)
                                                                                                                               gTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCt                     <  1:2115715/150‑1 (MQ=255)
                                                                                                                                  gTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCtgtg                  <  2:3594603/150‑1 (MQ=255)
                                                                                                                                   ttCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTgg                 >  1:2757575/1‑150 (MQ=255)
                                                                                                                                   ttCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTgg                 >  1:6314709/1‑150 (MQ=255)
                                                                                                                                   cgccAGCTCGCCTGGGCCAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTCTGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCCGGGCCTGATCGCTGTgg                 >  1:103795/3‑150 (MQ=255)
                                                                                                                                     ccAGCTCGCCTGGGCCAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCa               >  1:6546976/1‑150 (MQ=255)
                                                                                                                                      cAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCaa              <  1:8054651/150‑1 (MQ=255)
                                                                                                                                       aGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAg             >  2:5740145/1‑150 (MQ=255)
                                                                                                                                        gCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGc            <  2:4129626/150‑1 (MQ=255)
                                                                                                                                           ggCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGaa         <  1:7074068/150‑1 (MQ=255)
                                                                                                                                           ggCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGaa         <  1:6229443/150‑1 (MQ=255)
                                                                                                                                            gCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGaa         <  2:1540556/149‑1 (MQ=255)
                                                                                                                                            gCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAac        >  2:1559744/1‑150 (MQ=255)
                                                                                                                                             cccAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAaca       <  1:5094040/150‑1 (MQ=255)
                                                                                                                                              ccAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAacac      >  1:1553420/1‑150 (MQ=255)
                                                                                                                                              ccAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAacac      >  2:4763067/1‑150 (MQ=255)
                                                                                                                                              ccAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAacac      >  2:5952974/1‑150 (MQ=255)
                                                                                                                                               cAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAAcacc     >  2:3950531/1‑150 (MQ=255)
                                                                                                                                                aGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAAcacca    >  2:313523/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CCTGCGCCGGGTCTATCAGTGCGGTCTGGTTGAGGCTCACGCAGAAGGTTGTCGGTGCCTGGATACCTTGCAGAATGTTCATGTTGTAGGTCAGCGCGGCGGGAGCCCGCTCGGGGCCGCCCAGGCGGTAGTTCCAGCTGGCCCAGGCGAGCTGGCGGCGTGGCAGCAGACGGGTATCGGTATGCAGCACCACGTCGTTGCTGGCGTAATCGATGGCGCTGAGTACGGCGCGCTCCTGGTTGCTGGGGTTCTCCAGCAGTGCCAGGGCCTGATCGCTGTGGCAAGCGAACACCACA  >  NC_002947/3121590‑3121885

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑