| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 220,561 | A→T | 5.8% | intergenic (+18/‑110) | PP_0168 → / → PP_5431 | putative surface adhesion protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 220,561 | 0 | A | T | 5.8% | 595.4 / 17.3 | 193 | intergenic (+18/‑110) | PP_0168/PP_5431 | putative surface adhesion protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (119/60); new base T (4/7); total (124/69) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.41e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.67e-01 | |||||||||||
Only 100 of 201 total aligned reads displayed.
AACGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAACG > NC_002947/220412‑220710 | aaCGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGca < 1:2680242/150‑1 (MQ=255)aaCGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGca > 1:601757/1‑150 (MQ=255) ccGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGc < 1:655719/150‑1 (MQ=255) cGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCg < 2:2757385/150‑1 (MQ=255) gtggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCAATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGcccc > 1:236488/1‑150 (MQ=255) ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCgg > 2:1165369/1‑150 (MQ=255) ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCgg < 1:7580497/150‑1 (MQ=255) ggtATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACAACCGGGGCCGCACAGCGGCCCCgg > 2:6641924/1‑150 (MQ=255) tATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggtg < 1:7375932/150‑3 (MQ=255) tATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCggt > 1:5004506/1‑148 (MQ=255) tATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCggt < 2:5004506/149‑2 (MQ=255) tATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGCTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggtg < 2:4234971/150‑3 (MQ=255) aTCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGctc > 2:8861235/1‑150 (MQ=255) cGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCtt > 1:9026656/1‑150 (MQ=255) gCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCTGTGCGGCCCCggtggtct < 2:7140258/150‑7 (MQ=255) gCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCttt > 1:7467923/1‑150 (MQ=255) cAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTcc > 2:1341935/1‑150 (MQ=255) cAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTcc > 2:6227988/1‑150 (MQ=255) gACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTAcc > 1:1009811/1‑150 (MQ=255) tGACCATCATGGTGGAAGGCGTCAACTGGTCTAACACGACGATCAACTCGTTGATCAGCGGCGCCTATCCGACCATCATCATCCACAACAAGGACCGCTGACAGACCACGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGcc < 2:3654509/150‑1 (MQ=255) cATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACa > 1:4472277/1‑150 (MQ=255) tCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAgc > 2:287921/1‑150 (MQ=255) cAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAgcg > 1:8073133/1‑150 (MQ=255) gCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCAt > 1:164111/1‑150 (MQ=255) gAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATActc > 1:5449506/1‑150 (MQ=255) gAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATActc > 1:1882808/1‑150 (MQ=255) atggCGTCAACTGGTCTAACCAGACCATCACGTGGTTTATCAGCGGCGCCGAGCCCACCAACAACACCCACAACAAGGACCGCTCACCCACCCCGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATActct < 1:8006872/148‑1 (MQ=255) gcttaaaCTGGTCTAACCAGACTATAAACTGTTTGATCAGCGGCGCCGAACCTACCATAATCATCCACAACAAGGACAGCTGACTGACCACGGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGgc < 2:6575002/145‑1 (MQ=255) atctgtacTAACCCGACGATCACCGGGTTGATCCGCGGCGCCGACCCGACCATCATCATCCACCCCCCGGACCGCGCACCGCCCCCGGGGGCCGCACCGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCgg < 2:7658610/143‑1 (MQ=255) aaCTGGTCTAACCATACGATAAACTCTTTGATCAGCGGCGCCGATCCGACAATCATAATCCAAAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCgg < 1:6037570/150‑1 (MQ=255) aaCTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCgg > 1:4647578/1‑150 (MQ=255) aaCGGGTATAACCAGACGATCAACTCTTTTATCTGCGGCGCCTATCCGACAATCATCATCCAAAACAAGGACAGCTTACCGACCACGGGGGCCGCACCGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCgg < 1:2163347/150‑1 (MQ=255) tGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGcc > 2:343628/1‑150 (MQ=255) ggTCAAACCAGACGATCACCTCGTTTTTCTGCGGCGCCGACCCCACAATAAACACCCAAACCACGGACCGCTCACCCACCCCGGGGGCCGAACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCt < 2:2283866/150‑1 (MQ=255) gTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTg > 1:4114646/1‑150 (MQ=255) tCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgc > 2:8244933/1‑150 (MQ=255) tCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGgc > 2:4973747/1‑150 (MQ=255) tCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCAgc > 1:1656516/1‑150 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcgcgc > 1:621245/1‑150 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcgcgc > 1:4412229/1‑150 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcgcgc > 2:475355/1‑150 (MQ=255) aCCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTgcgcgc > 1:6947858/1‑150 (MQ=255) ccAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGcc > 1:4272304/1‑150 (MQ=255) atactttCAACTCGTTTATCTGGGGGGCCTATCCTACCATAATCTTCAACAACACGTACAGGTGACAGACCCCGGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCg < 2:179555/144‑1 (MQ=255) aGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCg > 1:2292627/1‑150 (MQ=255) taccaacAACTCGTTGATCTGCGGCGCCGATCCCACCACCATCACCCACACCCAGGACCCCTCACAGACCCCCGGGGCCCCACCGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCgg < 2:1748504/144‑1 (MQ=255) gACGATCAACTCTTTGATCCGCGGCGCCGAACCGCCCACCCGCATCCCCCACCCGGACAGCTTACCGCCCACCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCgg < 2:577458/150‑1 (MQ=255) gATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGa > 1:5581832/1‑150 (MQ=255) aCTCGTTGATCTGCGGCGCCGATCCCACCATCATCATCCACAACACGCACCGCTGACACACCACGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCttt < 2:1136633/150‑1 (MQ=255) aCTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCCGCGATCttt > 1:1136633/1‑150 (MQ=255) tgtttGATCTGCGGCGCCGATCCCACAATCATCATCCACAACACGCACCGCTGACACACCCCGGGGGCCGCACCGCGCCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc < 1:4919612/147‑1 (MQ=255) tCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc > 2:3110774/1‑150 (MQ=255) tCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc > 2:4605966/1‑150 (MQ=255) tCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGc > 1:2219498/1‑150 (MQ=255) gTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCt > 2:8973248/1‑150 (MQ=255) gtGATCAGCGGCGCCGATCCGACCATCATCATCCACAACCCGGACAGCTGACAGACCCCCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTa < 2:8330841/149‑1 (MQ=255) gATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTTCCTAtg > 1:7851463/1‑150 (MQ=255) tCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgct > 2:2796371/1‑150 (MQ=255) ctggggcgCCGATCCCACCAACAACACCCACAACAAGCACCGGTGACACACCCCGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTAtgctg < 1:3662757/146‑1 (MQ=255) cAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCGTTGCCTAtgctg > 1:539889/1‑150 (MQ=255) gcggcgCCGATCCGACAATCATCATCCACAACACGTACCGCTCACCGACCCCCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATgctgct < 1:2902093/150‑1 (MQ=255) ggcgCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGt < 2:7209429/150‑1 (MQ=255) ggcgCCGATCCCACCATCAAAACCCACACCACGGACCGCTCACAGACCCCGGGGGCCCCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGt < 1:1333950/150‑1 (MQ=255) gcgcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCAATGCTGCTGta > 1:8635083/1‑149 (MQ=255) gcCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTa > 2:2214631/1‑150 (MQ=255) gcCCATCCTACAATCAAAAACCAAAAAACGTACAGCTGACACACCACGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTa < 1:7226538/150‑1 (MQ=255) ccGATCCGACCAACATCACCCACAACAAGGACAGCTGACCGCCCCCCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTAc < 1:1421838/150‑1 (MQ=255) ccGAGCCGACCATCACCAGCCACAACCAGCACAGCTGACCGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTAc < 2:8849782/150‑1 (MQ=255) aTCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaa > 1:7271664/1‑150 (MQ=255) cGACCATCATCATCCACAACAAGGACAGCTGACAGACCACGGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaacaa < 2:7489810/150‑1 (MQ=255) cGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACcaacaa < 2:4472277/150‑1 (MQ=255) gACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGGGCCCGGCGATCTTTTGCTATGCTGCTGTGTACCAACAAg > 1:8818126/1‑150 (MQ=255) gACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAg > 2:6324322/1‑150 (MQ=255) ccATCATCATCCACAACACGCACAGCTGACCGACCACCGGGGCCGCACCGGGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGa < 2:2399288/150‑1 (MQ=255) catcatcatCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGaa > 2:5545533/1‑150 (MQ=255) catcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAaaca > 2:5159264/1‑150 (MQ=255) catcatcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGCTCTTTGCCGATGCTGCTGTCTACCCACCAGGAaaca > 1:434694/1‑150 (MQ=255) atcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGt > 2:8193986/1‑150 (MQ=255) atcCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCACTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACACGGAaaccccgt > 2:8622758/1‑145 (MQ=255) ccACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGGCTGCGCGCCCGGCGATATTTTCCTATTCTGCTGTCTACCAAAAAGGAAAAAAAGTGa > 1:3951318/1‑150 (MQ=255) caaaaacatGCACAGCTGACACCCCCGGGGGGCCCCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGa < 1:4786539/146‑1 (MQ=255) aacacGTACAGCTGACACACCACCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAg < 2:6932333/150‑1 (MQ=255) aacaaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAg > 1:2000719/1‑150 (MQ=255) caaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGATCTTTGCCGATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAggg > 1:6361609/1‑150 (MQ=255) atggACCGCTGACAGACCACGGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGa < 1:5826506/148‑1 (MQ=255) aaGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGa > 2:6804146/1‑150 (MQ=255) ggACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACa > 2:8697084/1‑150 (MQ=255) aCAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCCTACTCTGGCGCCGGGCCGGCGCGCCCGGCGCTCTTTTCCGATGCTGCTGTCTACCCACCAGGACACAACGGGCCGAGGGAccac > 1:3300967/1‑147 (MQ=255) ttaCAGCCCCCCGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCAt < 1:8255534/148‑1 (MQ=255) gACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCAGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCt > 1:6800442/1‑150 (MQ=255) accaccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTa > 1:495825/1‑150 (MQ=255) caccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACg > 2:5321710/1‑150 (MQ=255) cccGGGGCCGCACCGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGt < 2:5355948/149‑1 (MQ=255) ccGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCAGGTTCTACGTg > 2:1874014/1‑150 (MQ=255) cGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgc > 1:7496893/1‑150 (MQ=255) cGGGGCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCGGCGCGCCCGGCGCTCTTTGCCGATGCTGCTGTCTACCAACAAGGACACAACGTGACGAGGGGCATCGCCCGGTTCTACGTgc > 1:3440220/1‑150 (MQ=255) cGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAACGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgc < 2:6018005/150‑1 (MQ=255) ggggCCGCTGTGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTgca > 2:592582/1‑150 (MQ=255) acaGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGcaacgcaacg > 2:1400761/1‑150 (MQ=255) acaGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGAGcaacgcaacg > 2:5824026/1‑150 (MQ=255) | AACGCCGAAGGTGGTATCGCCAACGCCGACGTGACCATCAAGCTGGAAGGCGTCAACTGGTCTAACCAGACGATCAACTCGTTGATCAGCGGCGCCGATCCGACCATCATCATCCACAACAAGGACAGCTGACAGACCACCGGGGCCGCACAGCGGCCCCGGCTCTTTCCTGCTACCCGCCAACAGCGCATACTCTGGCGCCGGGCCTGCGCGCCCGGCGATCTTTGCCTATGCTGCTGTCTACCAACAAGGAAACAACGTGACGAGGGACATCGCCATGTTCTACGTGCAACGCAACG > NC_002947/220412‑220710 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |