| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 3,302,128 | T→A | 5.2% | intergenic (+61/+21) | pvdQ → / ← lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 3,302,128 | 0 | T | A | 5.2% | 1054.3 / 31.1 | 309 | intergenic (+61/+21) | pvdQ/lpxH | acyl‑homoserine lactone acylase PvdQ/UDP‑2,3‑diacylglucosamine hydrolase |
| Reads supporting (aligned to +/- strand): ref base T (157/135); new base A (10/6); total (167/142) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.10e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.15e-01 | |||||||||||
Only 100 of 312 total aligned reads displayed.
TTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGAATCG > NC_002947/3301979‑3302276 | ccGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGcc < 2:3122450/150‑1 (MQ=255) cGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGccc > 2:6847092/1‑150 (MQ=255) gcgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa > 1:1006159/1‑150 (MQ=255) gcgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa < 2:2153072/150‑1 (MQ=255) gcgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa > 2:1841627/1‑150 (MQ=255) gcgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa < 2:3899343/150‑1 (MQ=255) gcgcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGa < 1:3023765/150‑1 (MQ=255) gcAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAgg < 2:5359644/150‑1 (MQ=255) cAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGc < 1:5102886/150‑1 (MQ=255) aTCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCt > 2:2311215/1‑150 (MQ=255) tCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTg < 1:2777744/150‑1 (MQ=255) tCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTg < 2:8722562/150‑1 (MQ=255) cAAGGCTGATCCTGAGTAGCGGGATGTGGTGATCTGTGAGCGGGACATGGGGGCGGTTGTCAGCCTGCCCTGTGGCGTCAGCCTGCGCCGGCCCATTGGGGGGTAAACCGGCTCGTACTGGGGCCT‑GCGGGCTTGCCCGGGAGGCCCTGt < 2:242593/150‑1 (MQ=255) cAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGt > 1:6296557/1‑150 (MQ=255) aaGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTa > 1:3125794/1‑150 (MQ=255) aGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTaa > 1:3294426/1‑150 (MQ=255) aGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTaa > 2:4171133/1‑150 (MQ=255) aGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTaa > 1:2200891/1‑150 (MQ=255) aGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTaa > 2:7627404/1‑150 (MQ=255) aGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTaa > 2:3654641/1‑150 (MQ=255) gCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATg > 1:3439587/1‑150 (MQ=255) cAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGt > 2:8271562/1‑150 (MQ=255) aGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTc > 1:8107571/1‑150 (MQ=255) aGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTc > 1:2689149/1‑150 (MQ=255) gATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCa < 1:444351/150‑1 (MQ=255) tCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAgg > 1:1983923/1‑150 (MQ=255) tGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGaaa > 2:8615020/1‑150 (MQ=255) aGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAAc < 2:3007221/150‑1 (MQ=255) ccGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGa < 2:4538615/150‑1 (MQ=255) cGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGaa < 1:3654641/150‑1 (MQ=255) tggtgATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGcc > 2:7494629/1‑150 (MQ=255) gtgATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCaa < 1:3536526/150‑1 (MQ=255) gATCAGTGAGCGGGACACGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACt < 2:4330722/150‑1 (MQ=255) aTCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTg > 2:8954767/1‑150 (MQ=255) cAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGaa > 2:2860421/1‑150 (MQ=255) aGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGccc > 1:6371237/1‑150 (MQ=255) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTc > 2:6998013/1‑150 (MQ=255) gACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTc > 2:6464120/1‑150 (MQ=255) cAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTCATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGt > 1:2109667/1‑150 (MQ=255) ggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAAc < 1:5339386/150‑1 (MQ=255) ggggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAAc < 1:5051845/150‑1 (MQ=255) gggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAAcc < 2:9073374/150‑1 (MQ=255) ggCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCt > 1:6851527/1‑150 (MQ=255) ggTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAAccatgg > 1:6526861/1‑146 (MQ=255) gTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGc < 2:6421647/150‑1 (MQ=255) tCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGcc > 1:6202957/1‑150 (MQ=255) agccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCa > 2:1452762/1‑150 (MQ=255) agccagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCa > 1:4829062/1‑150 (MQ=255) cagccCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAAcc > 1:7736541/1‑150 (MQ=255) ccTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCGGGAATGTCAGGAAAACTCGAACGGCGCCCACGGACAGCCCTGTGCGGCAACCTGCAAGGCCCAACCgcgg > 2:4014345/1‑150 (MQ=39) tGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCgcggcg > 2:1186997/1‑150 (MQ=255) gAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGcggcgg > 2:2001011/1‑150 (MQ=255) aGGCGTCAGCATGAGCCGTCCCATTCGCTGGTAAAACCGCTCCTACAGGGGCCT‑GAGGGCTTGCCCTCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAAACGAGGCGGt > 2:6737151/1‑150 (MQ=255) gTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa < 2:6513228/150‑1 (MQ=255) gTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCa > 1:555298/1‑150 (MQ=255) aGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAATACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTc < 2:5998318/150‑1 (MQ=255) gCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGTCCAACCGCGGCGGTCCCAGTCg > 1:2983222/1‑150 (MQ=255) tGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGccc > 1:4453500/1‑150 (MQ=255) gcCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGc < 1:4673827/150‑1 (MQ=255) ccGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCa < 1:2469226/150‑1 (MQ=255) gCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGa < 1:1298667/150‑1 (MQ=255) agcgGGTTTACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCa < 1:6013326/136‑1 (MQ=255) ggTAAACCCGCTCATACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGTAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGcc < 1:7816465/150‑1 (MQ=255) tAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGGCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCACCCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCgg > 2:5690030/1‑150 (MQ=255) ttaCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTcc < 1:4223214/118‑1 (MQ=255) aaCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCAGTTCGTCAACCTGCAAGGCCCAACCGCGGCGCTCCCAGTCGCCCAGCACGAAACGCCGTCCCGGCt > 2:1338426/1‑150 (MQ=255) aCCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTg < 2:6323587/150‑1 (MQ=255) aCCCGCTCCTACAGGGGCCT‑GCGGGCTGGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCTAGTCGCCCAGCACGATACGCCGTGCCGGCTg < 2:5957066/150‑1 (MQ=255) ccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGc > 1:1865855/1‑150 (MQ=255) ccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGc > 1:3961438/1‑150 (MQ=255) ccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGc > 2:6051898/1‑150 (MQ=255) ccGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGc > 1:8566964/1‑150 (MQ=255) tCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATc < 2:164951/150‑1 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTTCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGAc > 1:8438681/1‑150 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTTCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGAc > 1:3833213/1‑150 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGAc > 1:4017539/1‑150 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGAc < 1:8753543/150‑1 (MQ=255) tACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGAc > 1:7194693/1‑150 (MQ=255) aCAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGAcc < 2:7832346/150‑1 (MQ=255) cAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCa < 1:7326991/150‑1 (MQ=255) aGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCAt > 1:930240/1‑150 (MQ=255) agggCCTCGCGGGCAAGCCCGCAGGCCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCAt > 2:8560357/2‑150 (MQ=255) gCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGc < 2:8687345/150‑1 (MQ=255) gCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGc < 1:5845153/150‑1 (MQ=255) gCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGc > 2:2587666/1‑150 (MQ=255) gCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGc < 2:4930508/150‑1 (MQ=255) cctcgCGGGCAAGCCCGC‑AGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCt > 1:7899316/5‑150 (MQ=255) cT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGc < 2:8283290/126‑1 (MQ=255) cT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGc > 1:8283290/1‑126 (MQ=255) cT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCtt < 2:1526547/150‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCa < 1:6098083/112‑1 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg > 1:6609987/1‑150 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg > 2:6949377/1‑150 (MQ=255) t‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtg > 1:6891685/1‑150 (MQ=255) cGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtgtg > 2:2656277/1‑150 (MQ=255) cGGGCGTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGCACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTtgtg < 2:6192326/150‑1 (MQ=255) gggCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGa > 1:411189/1‑150 (MQ=255) ggCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGaa < 1:696286/150‑1 (MQ=255) ggCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGaa < 2:3833285/150‑1 (MQ=255) gCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGAAt > 2:1495850/1‑150 (MQ=255) | TTACCGAGGCGCAGATCAAGGCAGATCCTGAGTACCGGGAAGTGGTGATCAGTGAGCGGGACAAGGGGGCGGTAGTCAGCCAGCCCTGAGGCGTCAGCCTGCGCCGGCCCATTCGCGGGTAAACCCGCTCCTACAGGGGCCT‑GCGGGCTTGCCCGCGAGGCCCTGTAATGTCAGGAAAACTCGAACGGCGCCAACTGAAAGCCCTGTTCGTCAACCTGCAAGGCCCAACCGCGGCGGTCCCAGTCGCCCAGCACGATACGCCGTGCCGGCTGGCCATCGACCATCAGCTTGTGAATCG > NC_002947/3301979‑3302276 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |